RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 EBLN2Q6P2I7 272 aa10.63□□□□□ -0.71
APOBEC3D-202ENST00000427494 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
APOBEC3D-202ENST00000427494 SMPXQ9UHP9 88 aa10.63□□□□□ -0.71
APOBEC3D-202ENST00000427494 EPG5Q9HCE0 2579 aa10.63□□□□□ -0.71
APOBEC3D-202ENST00000427494 IGKV3D-20A0A0C4DH25 116 aa10.63□□□□□ -0.71
APOBEC3D-202ENST00000427494 D6R8Y8 96 aa10.63□□□□□ -0.71
APOBEC3D-202ENST00000427494 K7EMT4 169 aa10.63□□□□□ -0.71
APOBEC3D-202ENST00000427494 OVOL1O14753 267 aa10.63□□□□□ -0.71
APOBEC3D-202ENST00000427494 RPLP1P05386 114 aaKnown RBP10.63□□□□□ -0.71
APOBEC3D-202ENST00000427494 EDN2P20800 178 aa10.63□□□□□ -0.71
APOBEC3D-202ENST00000427494 FOXE3Q13461 319 aa10.63□□□□□ -0.71
APOBEC3D-202ENST00000427494 KRTAP1-3Q8IUG1 177 aa10.63□□□□□ -0.71
APOBEC3D-202ENST00000427494 OR10J6PQ8NGY7 276 aa10.63□□□□□ -0.71
APOBEC3D-202ENST00000427494 PRRC2AP48634 2157 aaKnown RBP10.62□□□□□ -0.71
APOBEC3D-202ENST00000427494 BTF3P20290 206 aaKnown RBP10.62□□□□□ -0.71
APOBEC3D-202ENST00000427494 MRPL51Q4U2R6 128 aaKnown RBP10.62□□□□□ -0.71
APOBEC3D-202ENST00000427494 ZNF702PQ9H963 129 aa10.62□□□□□ -0.71
APOBEC3D-202ENST00000427494 LENEPQ9Y5L5 61 aa10.62□□□□□ -0.71
APOBEC3D-202ENST00000427494 C2orf70A6NJV1 201 aa10.61□□□□□ -0.71
APOBEC3D-202ENST00000427494 PRR9Q5T870 116 aa10.61□□□□□ -0.71
APOBEC3D-202ENST00000427494 LINC00477Q96M19 166 aa10.61□□□□□ -0.71
APOBEC3D-202ENST00000427494 C20orf144Q9BQM9 153 aa10.61□□□□□ -0.71
APOBEC3D-202ENST00000427494 CNFNQ9BYD5 112 aa10.61□□□□□ -0.71
APOBEC3D-202ENST00000427494 UFC1Q9Y3C8 167 aa10.61□□□□□ -0.71
APOBEC3D-202ENST00000427494 U3KQK5 164 aa10.61□□□□□ -0.71
APOBEC3D-202ENST00000427494 USP9YO00507 2555 aaPredicted RBP10.61□□□□□ -0.71
APOBEC3D-202ENST00000427494 SRD5A1P18405 259 aa10.61□□□□□ -0.71
APOBEC3D-202ENST00000427494 RAB4AP20338 218 aa10.61□□□□□ -0.71
APOBEC3D-202ENST00000427494 DEFB1P60022 68 aa10.61□□□□□ -0.71
APOBEC3D-202ENST00000427494 PRSS57Q6UWY2 283 aa10.61□□□□□ -0.71
APOBEC3D-202ENST00000427494 ORMDL3Q8N138 153 aa10.61□□□□□ -0.71
APOBEC3D-202ENST00000427494 PRSS3P2Q8NHM4 247 aa10.61□□□□□ -0.71
APOBEC3D-202ENST00000427494 PRELID3AQ96N28 172 aa10.61□□□□□ -0.71
APOBEC3D-202ENST00000427494 MSRB1Q9NZV6 116 aa10.61□□□□□ -0.71
APOBEC3D-202ENST00000427494 CENPEQ02224 2701 aa10.61□□□□□ -0.71
APOBEC3D-202ENST00000427494 J3KRW8 73 aa10.6□□□□□ -0.71
APOBEC3D-202ENST00000427494 LEPROTL1O95214 131 aa10.6□□□□□ -0.71
APOBEC3D-202ENST00000427494 Q6ZQT7 251 aa10.6□□□□□ -0.71
APOBEC3D-202ENST00000427494 FA2HQ7L5A8 372 aa10.6□□□□□ -0.71
APOBEC3D-202ENST00000427494 TMEM191AQ9H0A3 160 aa10.6□□□□□ -0.71
APOBEC3D-202ENST00000427494 PTPN13Q12923 2485 aa10.6□□□□□ -0.71
APOBEC3D-202ENST00000427494 LINC00173Q6ZV60 143 aa10.59□□□□□ -0.71
APOBEC3D-202ENST00000427494 ATOH7Q8N100 152 aa10.59□□□□□ -0.71
APOBEC3D-202ENST00000427494 TMEM70Q9BUB7 260 aa10.59□□□□□ -0.71
APOBEC3D-202ENST00000427494 AP5S1Q9NUS5 200 aa10.59□□□□□ -0.71
APOBEC3D-202ENST00000427494 ZANQ9Y493 2812 aa10.59□□□□□ -0.71
APOBEC3D-202ENST00000427494 LOC389332A0A1B0GUA5 103 aa10.59□□□□□ -0.71
APOBEC3D-202ENST00000427494 F6UB75 175 aa10.59□□□□□ -0.71
APOBEC3D-202ENST00000427494 SMKR1H3BMG3 65 aa10.59□□□□□ -0.71
APOBEC3D-202ENST00000427494 ELANEP08246 267 aa10.59□□□□□ -0.71
APOBEC3D-202ENST00000427494 CKS2P33552 79 aa10.59□□□□□ -0.71
APOBEC3D-202ENST00000427494 IFI27P40305 119 aaPredicted RBP10.59□□□□□ -0.71
APOBEC3D-202ENST00000427494 SPATA45Q537H7 98 aa10.59□□□□□ -0.71
APOBEC3D-202ENST00000427494 LGALS1P09382 135 aaKnown RBP10.58□□□□□ -0.72
APOBEC3D-202ENST00000427494 OR5AL1P0C617 328 aa10.58□□□□□ -0.72
APOBEC3D-202ENST00000427494 HIST2H2BCQ6DN03 193 aa10.58□□□□□ -0.72
APOBEC3D-202ENST00000427494 ZFAND2AQ8N6M9 145 aa10.58□□□□□ -0.72
APOBEC3D-202ENST00000427494 OR8A1Q8NGG7 326 aa10.58□□□□□ -0.72
APOBEC3D-202ENST00000427494 DUX5Q96PT3 197 aa10.58□□□□□ -0.72
APOBEC3D-202ENST00000427494 SIGLEC8Q9NYZ4 499 aa10.58□□□□□ -0.72
APOBEC3D-202ENST00000427494 TIMM8BQ9Y5J9 83 aaPredicted RBP10.58□□□□□ -0.72
APOBEC3D-202ENST00000427494 NCR2O95944 276 aa10.57□□□□□ -0.72
APOBEC3D-202ENST00000427494 SPATA12Q7Z6I5 190 aa10.57□□□□□ -0.72
APOBEC3D-202ENST00000427494 WFDC3Q8IUB2 231 aa10.57□□□□□ -0.72
APOBEC3D-202ENST00000427494 RNF185Q96GF1 192 aa10.57□□□□□ -0.72
APOBEC3D-202ENST00000427494 ABCA12Q86UK0 2595 aa10.57□□□□□ -0.72
APOBEC3D-202ENST00000427494 NAV2Q8IVL1 2488 aa10.57□□□□□ -0.72
APOBEC3D-202ENST00000427494 ID1P41134 155 aa10.57□□□□□ -0.72
APOBEC3D-202ENST00000427494 ZNF705AQ6ZN79 300 aaPredicted RBP10.57□□□□□ -0.72
APOBEC3D-202ENST00000427494 MYOZ3Q8TDC0 251 aa10.57□□□□□ -0.72
APOBEC3D-202ENST00000427494 MIEN1Q9BRT3 115 aa10.57□□□□□ -0.72
APOBEC3D-202ENST00000427494 IGHV4OR15-8A0A075B7B6 117 aa10.56□□□□□ -0.72
APOBEC3D-202ENST00000427494 A0A087WW49 117 aa10.56□□□□□ -0.72
APOBEC3D-202ENST00000427494 TRAV21A0A0B4J279 112 aa10.56□□□□□ -0.72
APOBEC3D-202ENST00000427494 SYS1-DBNDD2H3BUS1 97 aa10.56□□□□□ -0.72
APOBEC3D-202ENST00000427494 NPYP01303 97 aa10.56□□□□□ -0.72
APOBEC3D-202ENST00000427494 WFDC11Q8NEX6 87 aa10.56□□□□□ -0.72
APOBEC3D-202ENST00000427494 OR10AG1Q8NH19 301 aa10.56□□□□□ -0.72
APOBEC3D-202ENST00000427494 HSPB8Q9UJY1 196 aa10.56□□□□□ -0.72
APOBEC3D-202ENST00000427494 SYNJ2BPP57105 145 aa10.56□□□□□ -0.72
APOBEC3D-202ENST00000427494 SAMD13Q5VXD3 122 aa10.56□□□□□ -0.72
APOBEC3D-202ENST00000427494 DCANP1Q8TF63 244 aa10.56□□□□□ -0.72
APOBEC3D-202ENST00000427494 FAM19A4Q96LR4 140 aa10.56□□□□□ -0.72
APOBEC3D-202ENST00000427494 UBE2E2Q96LR5 201 aa10.56□□□□□ -0.72
APOBEC3D-202ENST00000427494 H3BVH4 76 aa10.55□□□□□ -0.72
APOBEC3D-202ENST00000427494 RNASE4P34096 147 aaKnown RBP10.55□□□□□ -0.72
APOBEC3D-202ENST00000427494 MAP1LC3CQ9BXW4 147 aa10.55□□□□□ -0.72
APOBEC3D-202ENST00000427494 CRXO43186 299 aaPredicted RBP10.54□□□□□ -0.72
APOBEC3D-202ENST00000427494 SNAI2O43623 268 aa10.54□□□□□ -0.72
APOBEC3D-202ENST00000427494 PPBPP02775 128 aa10.54□□□□□ -0.72
APOBEC3D-202ENST00000427494 TFPI2P48307 235 aa10.54□□□□□ -0.72
APOBEC3D-202ENST00000427494 MAJINQ3KP22 176 aa10.54□□□□□ -0.72
APOBEC3D-202ENST00000427494 MS4A6AQ9H2W1 248 aa10.54□□□□□ -0.72
APOBEC3D-202ENST00000427494 C20orf202A1L168 122 aa10.54□□□□□ -0.72
APOBEC3D-202ENST00000427494 PLA2G2AP14555 144 aa10.54□□□□□ -0.72
APOBEC3D-202ENST00000427494 HOXD3P31249 432 aaPredicted RBP10.54□□□□□ -0.72
APOBEC3D-202ENST00000427494 CACNG7P62955 275 aa10.54□□□□□ -0.72
APOBEC3D-202ENST00000427494 SPANXN1Q5VSR9 72 aa10.54□□□□□ -0.72
APOBEC3D-202ENST00000427494 SMIM15Q7Z3B0 74 aa10.54□□□□□ -0.72
APOBEC3D-202ENST00000427494 Q8N2B8 174 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms