RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 SCGB2A1O75556 95 aa3.99□□□□□ -1.77
C9orf3-205ENST00000427193 IFNA7P01567 189 aa3.99□□□□□ -1.77
C9orf3-205ENST00000427193 ORM2P19652 201 aa3.99□□□□□ -1.77
C9orf3-205ENST00000427193 CBLN1P23435 193 aa3.99□□□□□ -1.77
C9orf3-205ENST00000427193 LYZP61626 148 aa3.99□□□□□ -1.77
C9orf3-205ENST00000427193 RHOBP62745 196 aa3.99□□□□□ -1.77
C9orf3-205ENST00000427193 CCL20P78556 96 aa3.99□□□□□ -1.77
C9orf3-205ENST00000427193 PLECQ15149 4684 aaKnown RBP3.99□□□□□ -1.77
C9orf3-205ENST00000427193 RPEL1Q2QD12 228 aa3.99□□□□□ -1.77
C9orf3-205ENST00000427193 ACOT6Q3I5F7 207 aaPredicted RBP3.99□□□□□ -1.77
C9orf3-205ENST00000427193 DEFB121Q5J5C9 76 aa3.99□□□□□ -1.77
C9orf3-205ENST00000427193 FAM78BQ5VT40 261 aa3.99□□□□□ -1.77
C9orf3-205ENST00000427193 C10orf113Q5VZT2 155 aa3.99□□□□□ -1.77
C9orf3-205ENST00000427193 LRRC20Q8TCA0 184 aa3.99□□□□□ -1.77
C9orf3-205ENST00000427193 DCANP1Q8TF63 244 aa3.99□□□□□ -1.77
C9orf3-205ENST00000427193 RHPN1-AS1Q9BWJ2 59 aa3.99□□□□□ -1.77
C9orf3-205ENST00000427193 HRH4Q9H3N8 390 aa3.99□□□□□ -1.77
C9orf3-205ENST00000427193 HIGD1AQ9Y241 93 aa3.99□□□□□ -1.77
C9orf3-205ENST00000427193 UFC1Q9Y3C8 167 aa3.99□□□□□ -1.77
C9orf3-205ENST00000427193 IGHV3OR16-8A0A075B7F1 116 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 COX7A2P2O60397 106 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 ZNF253O75346 499 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 EIF3GO75821 320 aaKnown RBP eCLIP3.98□□□□□ -1.77
C9orf3-205ENST00000427193 IGLV1-51P01701 117 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 CD5P06127 495 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 FOLR2P14207 255 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 NPPCP23582 126 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 BMI1P35226 326 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 CDC34P49427 236 aaPredicted RBP3.98□□□□□ -1.77
C9orf3-205ENST00000427193 PDE6HQ13956 83 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 DEFB114Q30KQ6 69 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 AKR1C8PQ5T2L2 129 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 LEMD1Q68G75 181 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 STXBP6Q8NFX7 210 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 OR4F17Q8NGA8 305 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 OR1B1Q8NGR6 318 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 GPR82Q96P67 336 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 OR4F4Q96R69 305 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 METTL26Q96S19 204 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 ACTR3CQ9C0K3 210 aaPredicted RBP3.98□□□□□ -1.77
C9orf3-205ENST00000427193 ZNF586Q9NXT0 402 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 DOK5Q9P104 306 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 MLXQ9UH92 298 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 UBQLN2Q9UHD9 624 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 RABAC1Q9UI14 185 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 ARL2-SNX15V9GYD0 113 aa3.98□□□□□ -1.77
C9orf3-205ENST00000427193 UBR4Q5T4S7 5183 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 TRBV19A0A075B6N1 114 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 TRAV2A0A0B4J234 112 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 TRAV8-2A0A0B4J237 113 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 TRAV25A0A0B4J276 109 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 MAP1LC3B2A6NCE7 125 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 LINC00862A6NCI5 91 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 ZNF705EA8MWA4 302 aaPredicted RBP3.97□□□□□ -1.77
C9orf3-205ENST00000427193 OVOL1O14753 267 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 ARL14EPLP0DKL9 152 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 HIST1H1EP10412 219 aaKnown RBP3.97□□□□□ -1.77
C9orf3-205ENST00000427193 RPL7P18124 248 aaKnown RBP3.97□□□□□ -1.77
C9orf3-205ENST00000427193 GCHFRP30047 84 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 PSMB3P49720 205 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 COTL1Q14019 142 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 NSUN5P1Q3KNT7 163 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 SIGLEC15Q6ZMC9 328 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 EIF4E3Q8N5X7 224 aaKnown RBP3.97□□□□□ -1.77
C9orf3-205ENST00000427193 FAM213BQ8TBF2 198 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 SFT2D1Q8WV19 159 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 PBDC1Q9BVG4 233 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 MAP1LC3BQ9GZQ8 125 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 OR51M1Q9H341 326 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 SLC25A22Q9H936 323 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 RNF24Q9Y225 148 aa3.97□□□□□ -1.77
C9orf3-205ENST00000427193 ZNF256Q9Y2P7 627 aaPredicted RBP3.97□□□□□ -1.77
C9orf3-205ENST00000427193 MUC4Q99102 2169 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 SERTM2A0A1B0GWG4 89 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 A0A1W2PRE2 83 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 FAM74A7A6NL05 159 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 A8MTW9 85 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 A8MU10 97 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 GGTLC3B5MD39 225 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 HSBP1L1C9JCN9 74 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 K7EQG2 157 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 SLC17A3O00476 420 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 ZNF207O43670 478 aaKnown RBP3.96□□□□□ -1.78
C9orf3-205ENST00000427193 CXorf1O96002 111 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 NBEAP1P0C6P0 100 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 DNAH10OSP0CZ25 163 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 PYYP10082 97 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 S100A7P31151 101 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 MEOX2P50222 304 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 INSL3P51460 131 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 TAS2R45P59539 299 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 EGFEM1PQ0D2K5 195 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 GUK1Q16774 197 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 KHDC3LQ587J8 217 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 LCN15Q6UWW0 184 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 S100A7AQ86SG5 101 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 BPIFA4PQ86YQ2 179 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 TMEM61Q8N0U2 210 aa3.96□□□□□ -1.78
C9orf3-205ENST00000427193 LYPD1Q8N2G4 141 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms