RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 Q8N6K4 173 aa11.08□□□□□ -0.64
ERCC3-202ENST00000426778 AGPAT4-IT1Q9H0P7 198 aa11.08□□□□□ -0.64
ERCC3-202ENST00000426778 PEF1Q9UBV8 284 aaKnown RBP11.08□□□□□ -0.64
ERCC3-202ENST00000426778 FBLL1A6NHQ2 334 aaKnown RBP11.08□□□□□ -0.64
ERCC3-202ENST00000426778 BUB3O43684 328 aa11.08□□□□□ -0.64
ERCC3-202ENST00000426778 SAA4P35542 130 aa11.08□□□□□ -0.64
ERCC3-202ENST00000426778 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.08□□□□□ -0.64
ERCC3-202ENST00000426778 DTX2Q86UW9 622 aa11.08□□□□□ -0.64
ERCC3-202ENST00000426778 TMEM158Q8WZ71 300 aa11.08□□□□□ -0.64
ERCC3-202ENST00000426778 CCDC140Q96MF4 163 aa11.08□□□□□ -0.64
ERCC3-202ENST00000426778 FOXC2Q99958 501 aa11.08□□□□□ -0.64
ERCC3-202ENST00000426778 POLQO75417 2590 aa11.07□□□□□ -0.64
ERCC3-202ENST00000426778 K7ERJ3 54 aa11.07□□□□□ -0.64
ERCC3-202ENST00000426778 AP1S3Q96PC3 154 aa11.07□□□□□ -0.64
ERCC3-202ENST00000426778 MAP1LC3AQ9H492 121 aa11.07□□□□□ -0.64
ERCC3-202ENST00000426778 USP9YO00507 2555 aaPredicted RBP11.07□□□□□ -0.64
ERCC3-202ENST00000426778 CCDC144NLQ6NUI1 221 aa11.07□□□□□ -0.64
ERCC3-202ENST00000426778 KLK15Q9H2R5 256 aa11.07□□□□□ -0.64
ERCC3-202ENST00000426778 ZFAND3Q9H8U3 227 aa11.07□□□□□ -0.64
ERCC3-202ENST00000426778 UBTD1Q9HAC8 227 aa11.07□□□□□ -0.64
ERCC3-202ENST00000426778 CLPSL1A2RUU4 121 aa11.06□□□□□ -0.64
ERCC3-202ENST00000426778 GCSHP23434 173 aa11.06□□□□□ -0.64
ERCC3-202ENST00000426778 CDKN1BP46527 198 aa11.06□□□□□ -0.64
ERCC3-202ENST00000426778 C11orf71Q6IPW1 123 aa11.06□□□□□ -0.64
ERCC3-202ENST00000426778 S100A7AQ86SG5 101 aa11.06□□□□□ -0.64
ERCC3-202ENST00000426778 ZNF502Q8TBZ5 544 aa11.06□□□□□ -0.64
ERCC3-202ENST00000426778 CFAP46Q8IYW2 2715 aa11.06□□□□□ -0.64
ERCC3-202ENST00000426778 TMEM160Q9NX00 188 aa11.05□□□□□ -0.64
ERCC3-202ENST00000426778 EFNA4P52798 201 aa11.05□□□□□ -0.64
ERCC3-202ENST00000426778 ADAMTSL5Q6ZMM2 481 aa11.05□□□□□ -0.64
ERCC3-202ENST00000426778 TRAV8-2A0A0B4J237 113 aa11.04□□□□□ -0.64
ERCC3-202ENST00000426778 RIPPLY3P57055 190 aa11.04□□□□□ -0.64
ERCC3-202ENST00000426778 ODF1Q14990 250 aa11.04□□□□□ -0.64
ERCC3-202ENST00000426778 PRR9Q5T870 116 aa11.04□□□□□ -0.64
ERCC3-202ENST00000426778 A0A0G2JLM5 398 aa11.04□□□□□ -0.64
ERCC3-202ENST00000426778 H3BVH4 76 aa11.04□□□□□ -0.64
ERCC3-202ENST00000426778 FXYD2P54710 66 aa11.04□□□□□ -0.64
ERCC3-202ENST00000426778 LCNL1Q6ZST4 164 aa11.04□□□□□ -0.64
ERCC3-202ENST00000426778 ZNF48Q96MX3 618 aaPredicted RBP11.04□□□□□ -0.64
ERCC3-202ENST00000426778 PSMG3-AS1Q96PY0 264 aa11.04□□□□□ -0.64
ERCC3-202ENST00000426778 BPESC1Q9GZL8 116 aa11.04□□□□□ -0.64
ERCC3-202ENST00000426778 TRAV40A0A0B4J280 105 aa11.03□□□□□ -0.64
ERCC3-202ENST00000426778 BRD3OSQ6XYD6 125 aa11.03□□□□□ -0.64
ERCC3-202ENST00000426778 AJUBAQ96IF1 538 aa11.03□□□□□ -0.64
ERCC3-202ENST00000426778 SIRPDQ9H106 197 aa11.03□□□□□ -0.64
ERCC3-202ENST00000426778 GOSR1O95249 250 aa11.03□□□□□ -0.64
ERCC3-202ENST00000426778 TRBV12-3P01733 135 aa11.03□□□□□ -0.64
ERCC3-202ENST00000426778 NBL1P41271 181 aa11.03□□□□□ -0.64
ERCC3-202ENST00000426778 RPS20P60866 119 aaKnown RBP11.03□□□□□ -0.64
ERCC3-202ENST00000426778 SEC11AP67812 179 aa11.03□□□□□ -0.64
ERCC3-202ENST00000426778 ZC2HC1BQ5TFG8 222 aa11.03□□□□□ -0.64
ERCC3-202ENST00000426778 C8orf86Q6ZUL3 223 aa11.03□□□□□ -0.64
ERCC3-202ENST00000426778 GLMPQ8WWB7 406 aa11.03□□□□□ -0.64
ERCC3-202ENST00000426778 MEGF9Q9H1U4 602 aa11.02□□□□□ -0.64
ERCC3-202ENST00000426778 HHLA3Q9XRX5 114 aa11.02□□□□□ -0.64
ERCC3-202ENST00000426778 TMEM8BA6NDV4 472 aa11.02□□□□□ -0.65
ERCC3-202ENST00000426778 TMEM78Q5T7P6 136 aa11.02□□□□□ -0.65
ERCC3-202ENST00000426778 A6NDN8 102 aa11.02□□□□□ -0.65
ERCC3-202ENST00000426778 C9orf118A6NHY6 69 aa11.02□□□□□ -0.65
ERCC3-202ENST00000426778 M0R381 172 aa11.02□□□□□ -0.65
ERCC3-202ENST00000426778 HSD52Q0P140 79 aa11.02□□□□□ -0.65
ERCC3-202ENST00000426778 FBXL19-AS1Q494R0 122 aa11.02□□□□□ -0.65
ERCC3-202ENST00000426778 SPANXN1Q5VSR9 72 aa11.02□□□□□ -0.65
ERCC3-202ENST00000426778 FAM110DQ8TAY7 271 aaPredicted RBP11.02□□□□□ -0.65
ERCC3-202ENST00000426778 WFDC12Q8WWY7 111 aa11.02□□□□□ -0.65
ERCC3-202ENST00000426778 MRPL35Q9NZE8 188 aaKnown RBP11.02□□□□□ -0.65
ERCC3-202ENST00000426778 IGHV3-11P01762 117 aa11.01□□□□□ -0.65
ERCC3-202ENST00000426778 SMIM17P0DL12 118 aa11.01□□□□□ -0.65
ERCC3-202ENST00000426778 FCER1GP30273 86 aa11.01□□□□□ -0.65
ERCC3-202ENST00000426778 LY6DQ14210 128 aa11.01□□□□□ -0.65
ERCC3-202ENST00000426778 OR1N2Q8NGR9 330 aa11.01□□□□□ -0.65
ERCC3-202ENST00000426778 MYO18BQ8IUG5 2567 aa11.01□□□□□ -0.65
ERCC3-202ENST00000426778 F6UB75 175 aa11.01□□□□□ -0.65
ERCC3-202ENST00000426778 RPL11P62913 178 aaKnown RBP11.01□□□□□ -0.65
ERCC3-202ENST00000426778 EBI3Q14213 229 aa11.01□□□□□ -0.65
ERCC3-202ENST00000426778 COX8CQ7Z4L0 72 aa11.01□□□□□ -0.65
ERCC3-202ENST00000426778 OR2K2Q8NGT1 345 aa11.01□□□□□ -0.65
ERCC3-202ENST00000426778 C16orf92Q96LL3 132 aa11.01□□□□□ -0.65
ERCC3-202ENST00000426778 SCGB2A1O75556 95 aa11□□□□□ -0.65
ERCC3-202ENST00000426778 LINC01559Q495D7 138 aa11□□□□□ -0.65
ERCC3-202ENST00000426778 UNQ9165/PRO28630Q6UXU0 137 aa11□□□□□ -0.65
ERCC3-202ENST00000426778 C20orf173Q96LM9 149 aa11□□□□□ -0.65
ERCC3-202ENST00000426778 IGHV7-4-1A0A0J9YVY3 117 aa11□□□□□ -0.65
ERCC3-202ENST00000426778 IGKCP01834 107 aa11□□□□□ -0.65
ERCC3-202ENST00000426778 SRD5A1P18405 259 aa11□□□□□ -0.65
ERCC3-202ENST00000426778 LY6EQ16553 131 aa11□□□□□ -0.65
ERCC3-202ENST00000426778 HIF1ANQ9NWT6 349 aa11□□□□□ -0.65
ERCC3-202ENST00000426778 H3BRM9 83 aa10.99□□□□□ -0.65
ERCC3-202ENST00000426778 MINOS1Q5TGZ0 78 aa10.99□□□□□ -0.65
ERCC3-202ENST00000426778 METTL26Q96S19 204 aa10.99□□□□□ -0.65
ERCC3-202ENST00000426778 MINOS1-NBL1R4GNA1 71 aa10.99□□□□□ -0.65
ERCC3-202ENST00000426778 MAPKAPK5-AS1Q8N8E1 139 aa10.99□□□□□ -0.65
ERCC3-202ENST00000426778 NHP2Q9NX24 153 aaKnown RBP10.99□□□□□ -0.65
ERCC3-202ENST00000426778 SPCS1Q9Y6A9 102 aa10.99□□□□□ -0.65
ERCC3-202ENST00000426778 USP9XQ93008 2570 aaPredicted RBP10.99□□□□□ -0.65
ERCC3-202ENST00000426778 OR9G4Q8NGQ1 327 aa10.98□□□□□ -0.65
ERCC3-202ENST00000426778 CHAC1Q9BUX1 264 aa10.98□□□□□ -0.65
ERCC3-202ENST00000426778 CACNA1AO00555 2505 aa10.98□□□□□ -0.65
ERCC3-202ENST00000426778 UFSP1Q6NVU6 142 aa10.98□□□□□ -0.65
ERCC3-202ENST00000426778 MTURNQ8N3F0 131 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms