RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 FXYD5Q96DB9 178 aa6.86□□□□□ -1.31
GACAT3-201ENST00000426539 TNFRSF18Q9Y5U5 241 aa6.86□□□□□ -1.31
GACAT3-201ENST00000426539 IGHV1OR15-1A0A075B7D0 117 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 FAM240BA0A1B0GVZ2 78 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 SIVA1O15304 175 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 PAX4O43316 350 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 NXPH4O95158 308 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 SIX6O95475 246 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 OR10J4P0C629 311 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 NBEAP1P0C6P0 100 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 CRYBA4P53673 196 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 FHL2Q14192 279 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 TMEM78Q5T7P6 136 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 OR5C1Q8NGR4 320 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 PHYHIPLQ96FC7 376 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 CCDC32Q9BV29 185 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 OR51M1Q9H341 326 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 AAMDCQ9H7C9 122 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 OR5AC2Q9NZP5 309 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 ICOSQ9Y6W8 199 aa6.85□□□□□ -1.31
GACAT3-201ENST00000426539 ZNF138P52744 262 aa6.84□□□□□ -1.31
GACAT3-201ENST00000426539 LYPD5Q6UWN5 251 aa6.84□□□□□ -1.31
GACAT3-201ENST00000426539 C8orf49Q96NF6 230 aa6.84□□□□□ -1.31
GACAT3-201ENST00000426539 PAXXQ9BUH6 204 aa6.84□□□□□ -1.31
GACAT3-201ENST00000426539 WDR61Q9GZS3 305 aaKnown RBP6.84□□□□□ -1.31
GACAT3-201ENST00000426539 MDFICQ9P1T7 246 aa6.84□□□□□ -1.31
GACAT3-201ENST00000426539 PRO0255Q9UI72 69 aa6.84□□□□□ -1.31
GACAT3-201ENST00000426539 TRBV7-9A0A0J9YWB2 115 aa6.83□□□□□ -1.32
GACAT3-201ENST00000426539 PRAF2O60831 178 aa6.83□□□□□ -1.32
GACAT3-201ENST00000426539 ASAH1Q13510 395 aa6.83□□□□□ -1.32
GACAT3-201ENST00000426539 ZNF266Q14584 549 aa6.83□□□□□ -1.32
GACAT3-201ENST00000426539 MUC21Q5SSG8 566 aa6.83□□□□□ -1.32
GACAT3-201ENST00000426539 ARPC5LQ9BPX5 153 aa6.83□□□□□ -1.32
GACAT3-201ENST00000426539 MRPL32Q9BYC8 188 aaKnown RBP6.83□□□□□ -1.32
GACAT3-201ENST00000426539 HHLA3Q9XRX5 114 aa6.83□□□□□ -1.32
GACAT3-201ENST00000426539 LOC100996750A0A140TA64 210 aa6.82□□□□□ -1.32
GACAT3-201ENST00000426539 E5RGE8 158 aa6.82□□□□□ -1.32
GACAT3-201ENST00000426539 H3BS24 57 aa6.82□□□□□ -1.32
GACAT3-201ENST00000426539 SFTA3P0C7M3 94 aa6.82□□□□□ -1.32
GACAT3-201ENST00000426539 DNAH10OSP0CZ25 163 aa6.82□□□□□ -1.32
GACAT3-201ENST00000426539 XGP55808 180 aa6.82□□□□□ -1.32
GACAT3-201ENST00000426539 RANP62826 216 aaKnown RBP6.82□□□□□ -1.32
GACAT3-201ENST00000426539 ZNF415Q09FC8 603 aa6.82□□□□□ -1.32
GACAT3-201ENST00000426539 LRRC37A5PQ49AS3 106 aa6.82□□□□□ -1.32
GACAT3-201ENST00000426539 MZT2BQ6NZ67 158 aa6.82□□□□□ -1.32
GACAT3-201ENST00000426539 ZNF479Q96JC4 524 aa6.82□□□□□ -1.32
GACAT3-201ENST00000426539 KRTAP4-6Q9BYQ5 205 aa6.82□□□□□ -1.32
GACAT3-201ENST00000426539 NMES1Q9C002 83 aa6.82□□□□□ -1.32
GACAT3-201ENST00000426539 SLC25A31Q9H0C2 315 aa6.82□□□□□ -1.32
GACAT3-201ENST00000426539 PTTG2Q9NZH5 202 aa6.82□□□□□ -1.32
GACAT3-201ENST00000426539 RBAKDNA6NC62 111 aa6.81□□□□□ -1.32
GACAT3-201ENST00000426539 DIRC3C9JPN6 131 aa6.81□□□□□ -1.32
GACAT3-201ENST00000426539 K7EQD1 137 aa6.81□□□□□ -1.32
GACAT3-201ENST00000426539 EIF3GO75821 320 aaKnown RBP eCLIP6.81□□□□□ -1.32
GACAT3-201ENST00000426539 H2BFSP57053 126 aa6.81□□□□□ -1.32
GACAT3-201ENST00000426539 IFITM3Q01628 133 aa6.81□□□□□ -1.32
GACAT3-201ENST00000426539 SLAQ13239 276 aa6.81□□□□□ -1.32
GACAT3-201ENST00000426539 MRPL23Q16540 153 aaKnown RBP6.81□□□□□ -1.32
GACAT3-201ENST00000426539 Q6AWC8 147 aa6.81□□□□□ -1.32
GACAT3-201ENST00000426539 NEGR1Q7Z3B1 354 aa6.81□□□□□ -1.32
GACAT3-201ENST00000426539 WFDC10BQ8IUB3 73 aa6.81□□□□□ -1.32
GACAT3-201ENST00000426539 IQCF2Q8IXL9 164 aa6.81□□□□□ -1.32
GACAT3-201ENST00000426539 RASL10AQ92737 203 aa6.81□□□□□ -1.32
GACAT3-201ENST00000426539 A0A087WTM6 91 aa6.8□□□□□ -1.32
GACAT3-201ENST00000426539 TRGV4A0A0C4DH28 118 aa6.8□□□□□ -1.32
GACAT3-201ENST00000426539 OR7C2O60412 319 aa6.8□□□□□ -1.32
GACAT3-201ENST00000426539 KRTAP10-1P60331 282 aa6.8□□□□□ -1.32
GACAT3-201ENST00000426539 ERVFC1-1P60608 527 aa6.8□□□□□ -1.32
GACAT3-201ENST00000426539 UBE2L3P68036 154 aaKnown RBP6.8□□□□□ -1.32
GACAT3-201ENST00000426539 TMEM183BQ1AE95 376 aa6.8□□□□□ -1.32
GACAT3-201ENST00000426539 TMEM183AQ8IXX5 376 aa6.8□□□□□ -1.32
GACAT3-201ENST00000426539 LYPD1Q8N2G4 141 aa6.8□□□□□ -1.32
GACAT3-201ENST00000426539 OR10G4Q8NGN3 311 aa6.8□□□□□ -1.32
GACAT3-201ENST00000426539 ATP5SQ99766 215 aa6.8□□□□□ -1.32
GACAT3-201ENST00000426539 KCNIP2Q9NS61 270 aa6.8□□□□□ -1.32
GACAT3-201ENST00000426539 C17orf112F2Z3M2 114 aa6.79□□□□□ -1.32
GACAT3-201ENST00000426539 UPK1BO75841 260 aa6.79□□□□□ -1.32
GACAT3-201ENST00000426539 GYPEP15421 78 aa6.79□□□□□ -1.32
GACAT3-201ENST00000426539 CSN1S1P47710 185 aa6.79□□□□□ -1.32
GACAT3-201ENST00000426539 FFAR4Q5NUL3 377 aa6.79□□□□□ -1.32
GACAT3-201ENST00000426539 XP32Q5T750 250 aa6.79□□□□□ -1.32
GACAT3-201ENST00000426539 LINC00299Q6ZSB3 139 aa6.79□□□□□ -1.32
GACAT3-201ENST00000426539 ENKURQ8TC29 256 aa6.79□□□□□ -1.32
GACAT3-201ENST00000426539 PPP1R1CQ8WVI7 109 aa6.79□□□□□ -1.32
GACAT3-201ENST00000426539 TVP23CQ96ET8 276 aa6.79□□□□□ -1.32
GACAT3-201ENST00000426539 HSPB11Q9Y547 144 aa6.79□□□□□ -1.32
GACAT3-201ENST00000426539 LY96Q9Y6Y9 160 aa6.79□□□□□ -1.32
GACAT3-201ENST00000426539 FAT1Q14517 4588 aa6.78□□□□□ -1.32
GACAT3-201ENST00000426539 TRGV11A0A075B6L2 103 aa6.78□□□□□ -1.32
GACAT3-201ENST00000426539 IGHV3-16A0A0C4DH30 117 aa6.78□□□□□ -1.32
GACAT3-201ENST00000426539 LOC100131303A0A0U1RQF7 123 aa6.78□□□□□ -1.32
GACAT3-201ENST00000426539 EPM2AB3EWF7 344 aa6.78□□□□□ -1.32
GACAT3-201ENST00000426539 GNRH2O43555 120 aa6.78□□□□□ -1.32
GACAT3-201ENST00000426539 SRIP30626 198 aa6.78□□□□□ -1.32
GACAT3-201ENST00000426539 TDRG1Q3Y452 100 aa6.78□□□□□ -1.32
GACAT3-201ENST00000426539 NFE4Q86UQ8 179 aa6.78□□□□□ -1.32
GACAT3-201ENST00000426539 TMED6Q8WW62 240 aa6.78□□□□□ -1.32
GACAT3-201ENST00000426539 S100ZQ8WXG8 99 aa6.78□□□□□ -1.32
GACAT3-201ENST00000426539 SPXQ9BT56 116 aa6.78□□□□□ -1.32
GACAT3-201ENST00000426539 SMIM3Q9BZL3 60 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms