RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 A0A1W2PPV4 95 aa9.66□□□□□ -0.86
SNX3-204ENST00000426155 H7BYZ3 331 aa9.66□□□□□ -0.86
SNX3-204ENST00000426155 DEFB130BP0DP73 79 aa9.66□□□□□ -0.86
SNX3-204ENST00000426155 DEFB130AP0DP74 79 aa9.66□□□□□ -0.86
SNX3-204ENST00000426155 CDC34P49427 236 aaPredicted RBP9.66□□□□□ -0.86
SNX3-204ENST00000426155 TAS2R45P59539 299 aa9.66□□□□□ -0.86
SNX3-204ENST00000426155 BLOC1S1P78537 153 aa9.66□□□□□ -0.86
SNX3-204ENST00000426155 LGALS9CQ6DKI2 356 aa9.66□□□□□ -0.86
SNX3-204ENST00000426155 Q6ZQT7 251 aa9.66□□□□□ -0.86
SNX3-204ENST00000426155 SSX7Q7RTT5 188 aa9.66□□□□□ -0.86
SNX3-204ENST00000426155 OR2G3Q8NGZ4 309 aa9.66□□□□□ -0.86
SNX3-204ENST00000426155 RNASE8Q8TDE3 154 aaKnown RBP9.66□□□□□ -0.86
SNX3-204ENST00000426155 C16orf74Q96GX8 76 aa9.66□□□□□ -0.86
SNX3-204ENST00000426155 PSMG3Q9BT73 122 aaPredicted RBP9.66□□□□□ -0.86
SNX3-204ENST00000426155 SEC11CQ9BY50 192 aa9.66□□□□□ -0.86
SNX3-204ENST00000426155 RPH3ALQ9UNE2 315 aa9.66□□□□□ -0.86
SNX3-204ENST00000426155 C7orf71A4D174 169 aa9.65□□□□□ -0.86
SNX3-204ENST00000426155 KLLNB2CW77 178 aa9.65□□□□□ -0.86
SNX3-204ENST00000426155 F8W036 122 aa9.65□□□□□ -0.86
SNX3-204ENST00000426155 ARL14EPLP0DKL9 152 aa9.65□□□□□ -0.86
SNX3-204ENST00000426155 C10orf91Q5T1B1 145 aa9.65□□□□□ -0.86
SNX3-204ENST00000426155 TMEM78Q5T7P6 136 aa9.65□□□□□ -0.86
SNX3-204ENST00000426155 C9orf47Q6ZRZ4 202 aa9.65□□□□□ -0.86
SNX3-204ENST00000426155 TMEM263Q8WUH6 116 aaKnown RBP9.65□□□□□ -0.86
SNX3-204ENST00000426155 C20orf144Q9BQM9 153 aa9.65□□□□□ -0.86
SNX3-204ENST00000426155 LYRM9A8MSI8 78 aa9.64□□□□□ -0.87
SNX3-204ENST00000426155 RNASE4P34096 147 aaKnown RBP9.64□□□□□ -0.87
SNX3-204ENST00000426155 TCTAP57738 103 aa9.64□□□□□ -0.87
SNX3-204ENST00000426155 CTAG1AP78358 180 aa9.64□□□□□ -0.87
SNX3-204ENST00000426155 ZFAND2AQ8N6M9 145 aa9.64□□□□□ -0.87
SNX3-204ENST00000426155 RAB24Q969Q5 203 aa9.64□□□□□ -0.87
SNX3-204ENST00000426155 LINC00477Q96M19 166 aa9.64□□□□□ -0.87
SNX3-204ENST00000426155 TREM1Q9NP99 234 aa9.64□□□□□ -0.87
SNX3-204ENST00000426155 NOP10Q9NPE3 64 aaKnown RBP9.64□□□□□ -0.87
SNX3-204ENST00000426155 ZNF492Q9P255 531 aa9.64□□□□□ -0.87
SNX3-204ENST00000426155 SLC25A5P05141 298 aaKnown RBP9.63□□□□□ -0.87
SNX3-204ENST00000426155 STAG3L2P0CL84 134 aa9.63□□□□□ -0.87
SNX3-204ENST00000426155 STAG3L3P0CL85 134 aa9.63□□□□□ -0.87
SNX3-204ENST00000426155 CRISP2P16562 243 aa9.63□□□□□ -0.87
SNX3-204ENST00000426155 GNG5P63218 68 aa9.63□□□□□ -0.87
SNX3-204ENST00000426155 FAM74A1Q5RGS3 127 aa9.63□□□□□ -0.87
SNX3-204ENST00000426155 ATRAIDQ6UW56 229 aa9.63□□□□□ -0.87
SNX3-204ENST00000426155 PQLC2Q6ZP29 291 aa9.63□□□□□ -0.87
SNX3-204ENST00000426155 LYPD1Q8N2G4 141 aa9.63□□□□□ -0.87
SNX3-204ENST00000426155 NDUFAF3Q9BU61 184 aa9.63□□□□□ -0.87
SNX3-204ENST00000426155 DNAH2Q9P225 4427 aa9.63□□□□□ -0.87
SNX3-204ENST00000426155 PGPA6NDG6 321 aa9.62□□□□□ -0.87
SNX3-204ENST00000426155 FAM74A7A6NL05 159 aa9.62□□□□□ -0.87
SNX3-204ENST00000426155 DIRC3C9JPN6 131 aa9.62□□□□□ -0.87
SNX3-204ENST00000426155 ZNF324O75467 553 aaPredicted RBP9.62□□□□□ -0.87
SNX3-204ENST00000426155 GPX1P07203 203 aa9.62□□□□□ -0.87
SNX3-204ENST00000426155 CSN1S1P47710 185 aa9.62□□□□□ -0.87
SNX3-204ENST00000426155 ZNF138P52744 262 aa9.62□□□□□ -0.87
SNX3-204ENST00000426155 FAM74A3Q4VXF1 159 aa9.62□□□□□ -0.87
SNX3-204ENST00000426155 TMEM88Q6PEY1 159 aa9.62□□□□□ -0.87
SNX3-204ENST00000426155 ZNF493Q6ZR52 646 aa9.62□□□□□ -0.87
SNX3-204ENST00000426155 OTORQ9NRC9 128 aa9.62□□□□□ -0.87
SNX3-204ENST00000426155 TIMM8BQ9Y5J9 83 aaPredicted RBP9.62□□□□□ -0.87
SNX3-204ENST00000426155 BORCS7-ASMTA0A0B4J1R7 106 aa9.61□□□□□ -0.87
SNX3-204ENST00000426155 S100A9P06702 114 aaKnown RBP9.61□□□□□ -0.87
SNX3-204ENST00000426155 AKR1D1P51857 326 aa9.61□□□□□ -0.87
SNX3-204ENST00000426155 RAB5BP61020 215 aa9.61□□□□□ -0.87
SNX3-204ENST00000426155 SERF2P84101 59 aa9.61□□□□□ -0.87
SNX3-204ENST00000426155 ZNF726P1Q15940 193 aa9.61□□□□□ -0.87
SNX3-204ENST00000426155 PYGO2Q9BRQ0 406 aa9.61□□□□□ -0.87
SNX3-204ENST00000426155 SMCO4Q9NRQ5 59 aa9.61□□□□□ -0.87
SNX3-204ENST00000426155 CYTL1Q9NRR1 136 aa9.61□□□□□ -0.87
SNX3-204ENST00000426155 TP53TG3Q9ULZ0 132 aa9.61□□□□□ -0.87
SNX3-204ENST00000426155 NACAE9PAV3 2078 aa9.6□□□□□ -0.87
SNX3-204ENST00000426155 TRAV8-1A0A0A6YYK1 113 aa9.6□□□□□ -0.87
SNX3-204ENST00000426155 RBAKDNA6NC62 111 aa9.6□□□□□ -0.87
SNX3-204ENST00000426155 S100A8P05109 93 aa9.6□□□□□ -0.87
SNX3-204ENST00000426155 GCHFRP30047 84 aa9.6□□□□□ -0.87
SNX3-204ENST00000426155 GOLT1AQ6ZVE7 132 aa9.6□□□□□ -0.87
SNX3-204ENST00000426155 C11orf72Q8NBR9 251 aa9.6□□□□□ -0.87
SNX3-204ENST00000426155 CMTM2Q8TAZ6 248 aa9.6□□□□□ -0.87
SNX3-204ENST00000426155 GNPNAT1Q96EK6 184 aaPredicted RBP9.6□□□□□ -0.87
SNX3-204ENST00000426155 TCEAL7Q9BRU2 100 aa9.6□□□□□ -0.87
SNX3-204ENST00000426155 GSN-AS1Q9NRJ2 163 aa9.6□□□□□ -0.87
SNX3-204ENST00000426155 BIRC6Q9NR09 4857 aa9.59□□□□□ -0.87
SNX3-204ENST00000426155 GAGE12BA1L429 117 aa9.59□□□□□ -0.87
SNX3-204ENST00000426155 CBY3A6NI87 242 aa9.59□□□□□ -0.87
SNX3-204ENST00000426155 PCP4L1A6NKN8 68 aa9.59□□□□□ -0.87
SNX3-204ENST00000426155 SNURFLB1AK76 121 aa9.59□□□□□ -0.87
SNX3-204ENST00000426155 F5H768 121 aa9.59□□□□□ -0.87
SNX3-204ENST00000426155 GAGE7O76087 117 aa9.59□□□□□ -0.87
SNX3-204ENST00000426155 MBP02144 154 aa9.59□□□□□ -0.87
SNX3-204ENST00000426155 GAGE12FP0CL80 117 aa9.59□□□□□ -0.87
SNX3-204ENST00000426155 GAGE12GP0CL81 117 aa9.59□□□□□ -0.87
SNX3-204ENST00000426155 GAGE12IP0CL82 117 aa9.59□□□□□ -0.87
SNX3-204ENST00000426155 PEA15Q15121 130 aa9.59□□□□□ -0.87
SNX3-204ENST00000426155 C15orf54Q8N8G6 183 aa9.59□□□□□ -0.87
SNX3-204ENST00000426155 RXFP4Q8TDU9 374 aa9.59□□□□□ -0.87
SNX3-204ENST00000426155 SGK494Q96LW2 274 aa9.59□□□□□ -0.87
SNX3-204ENST00000426155 ACTR3CQ9C0K3 210 aaPredicted RBP9.59□□□□□ -0.87
SNX3-204ENST00000426155 C1orf196B1AJZ1 125 aa9.58□□□□□ -0.88
SNX3-204ENST00000426155 GGTLC3B5MD39 225 aa9.58□□□□□ -0.88
SNX3-204ENST00000426155 F6UZH7 168 aa9.58□□□□□ -0.88
SNX3-204ENST00000426155 ATP5G1P05496 136 aa9.58□□□□□ -0.88
SNX3-204ENST00000426155 ATP5G3P48201 142 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms