RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 IGHV7-81A0A0B4J1V7 117 aa13.34□□□□□ -0.27
RARA-206ENST00000425707 IGLL5B9A064 214 aa13.34□□□□□ -0.27
RARA-206ENST00000425707 K7EMI3 77 aa13.34□□□□□ -0.27
RARA-206ENST00000425707 ERCC8Q13216 396 aa13.34□□□□□ -0.27
RARA-206ENST00000425707 TM4SF20Q53R12 229 aa13.34□□□□□ -0.27
RARA-206ENST00000425707 NHP2Q9NX24 153 aaKnown RBP13.34□□□□□ -0.27
RARA-206ENST00000425707 MRPL35Q9NZE8 188 aaKnown RBP13.34□□□□□ -0.27
RARA-206ENST00000425707 IGHV7-4-1A0A0J9YVY3 117 aa13.33□□□□□ -0.28
RARA-206ENST00000425707 A0A1B0GWB2 263 aa13.33□□□□□ -0.28
RARA-206ENST00000425707 NCBP2LA6PVI3 153 aaKnown RBP13.33□□□□□ -0.28
RARA-206ENST00000425707 PRAC2D3DTV9 90 aa13.33□□□□□ -0.28
RARA-206ENST00000425707 J3QR89 54 aa13.33□□□□□ -0.28
RARA-206ENST00000425707 IGFL4Q6B9Z1 124 aa13.33□□□□□ -0.28
RARA-206ENST00000425707 VMO1Q7Z5L0 202 aa13.33□□□□□ -0.28
RARA-206ENST00000425707 TEX48A0A1B0GUV7 120 aa13.33□□□□□ -0.28
RARA-206ENST00000425707 GOSR1O95249 250 aa13.33□□□□□ -0.28
RARA-206ENST00000425707 TPRP12270 2363 aaKnown RBP13.33□□□□□ -0.28
RARA-206ENST00000425707 SLC25A16P16260 332 aa13.33□□□□□ -0.28
RARA-206ENST00000425707 KLRD1Q13241 179 aa13.33□□□□□ -0.28
RARA-206ENST00000425707 C9orf47Q6ZRZ4 202 aa13.33□□□□□ -0.28
RARA-206ENST00000425707 RP1L1Q8IWN7 2480 aaPredicted RBP13.33□□□□□ -0.28
RARA-206ENST00000425707 TRAV40A0A0B4J280 105 aa13.32□□□□□ -0.28
RARA-206ENST00000425707 A0A1W2PRD5 423 aa13.32□□□□□ -0.28
RARA-206ENST00000425707 A0A1W2PRF3 423 aa13.32□□□□□ -0.28
RARA-206ENST00000425707 A0A1W2PRM7 423 aa13.32□□□□□ -0.28
RARA-206ENST00000425707 IGHV3-23P01764 117 aa13.32□□□□□ -0.28
RARA-206ENST00000425707 GATA1P15976 413 aaPredicted RBP13.32□□□□□ -0.28
RARA-206ENST00000425707 AGPAT4-IT1Q9H0P7 198 aa13.32□□□□□ -0.28
RARA-206ENST00000425707 TMEM160Q9NX00 188 aa13.32□□□□□ -0.28
RARA-206ENST00000425707 LENEPQ9Y5L5 61 aa13.32□□□□□ -0.28
RARA-206ENST00000425707 TTTY13Q9BZ97 58 aa13.31□□□□□ -0.28
RARA-206ENST00000425707 PIEZO2Q9H5I5 2752 aa13.31□□□□□ -0.28
RARA-206ENST00000425707 TMEM11P17152 192 aa13.31□□□□□ -0.28
RARA-206ENST00000425707 RPL24P83731 157 aaKnown RBP13.31□□□□□ -0.28
RARA-206ENST00000425707 TMEM78Q5T7P6 136 aa13.31□□□□□ -0.28
RARA-206ENST00000425707 C11orf21Q9P2W6 132 aa13.31□□□□□ -0.28
RARA-206ENST00000425707 H7C1H1 209 aa13.31□□□□□ -0.28
RARA-206ENST00000425707 CIDEAO60543 219 aa13.31□□□□□ -0.28
RARA-206ENST00000425707 C12orf74Q32Q52 190 aa13.31□□□□□ -0.28
RARA-206ENST00000425707 ZNF479Q96JC4 524 aa13.31□□□□□ -0.28
RARA-206ENST00000425707 ATP6V0BQ99437 205 aa13.31□□□□□ -0.28
RARA-206ENST00000425707 SPANXB1Q9NS25 103 aaPredicted RBP13.31□□□□□ -0.28
RARA-206ENST00000425707 K7ERJ3 54 aa13.3□□□□□ -0.28
RARA-206ENST00000425707 TRGV3P03979 118 aa13.3□□□□□ -0.28
RARA-206ENST00000425707 Q8N9W7 124 aa13.3□□□□□ -0.28
RARA-206ENST00000425707 ZZEF1O43149 2961 aa13.3□□□□□ -0.28
RARA-206ENST00000425707 CLPSL1A2RUU4 121 aa13.3□□□□□ -0.28
RARA-206ENST00000425707 F8VRH5 84 aa13.3□□□□□ -0.28
RARA-206ENST00000425707 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.3□□□□□ -0.28
RARA-206ENST00000425707 SAMD13Q5VXD3 122 aa13.3□□□□□ -0.28
RARA-206ENST00000425707 MAPKAPK5-AS1Q8N8E1 139 aa13.3□□□□□ -0.28
RARA-206ENST00000425707 TRBV7-3A0A075B6L6 115 aa13.29□□□□□ -0.28
RARA-206ENST00000425707 C15orf32Q32M92 178 aa13.29□□□□□ -0.28
RARA-206ENST00000425707 ORMDL2Q53FV1 153 aa13.29□□□□□ -0.28
RARA-206ENST00000425707 CENPVL3A0A0U1RRI6 287 aa13.29□□□□□ -0.28
RARA-206ENST00000425707 CD300EQ496F6 205 aaPredicted RBP13.29□□□□□ -0.28
RARA-206ENST00000425707 MSRB2Q9Y3D2 182 aa13.29□□□□□ -0.28
RARA-206ENST00000425707 U3KQE9 123 aa13.29□□□□□ -0.28
RARA-206ENST00000425707 TRAV8-2A0A0B4J237 113 aa13.29□□□□□ -0.28
RARA-206ENST00000425707 SMIM2Q9BVW6 85 aa13.29□□□□□ -0.28
RARA-206ENST00000425707 ANKRD11Q6UB99 2663 aaPredicted RBP13.29□□□□□ -0.28
RARA-206ENST00000425707 PPIFP30405 207 aaKnown RBP13.28□□□□□ -0.28
RARA-206ENST00000425707 SIGMAR1Q99720 223 aa13.28□□□□□ -0.28
RARA-206ENST00000425707 C20orf78Q9BR46 151 aa13.28□□□□□ -0.28
RARA-206ENST00000425707 RRN3P1Q2M238 152 aa13.28□□□□□ -0.28
RARA-206ENST00000425707 RNF182Q8N6D2 247 aa13.28□□□□□ -0.28
RARA-206ENST00000425707 SPATA25Q9BR10 227 aa13.27□□□□□ -0.28
RARA-206ENST00000425707 SELENOKQ9Y6D0 94 aa13.27□□□□□ -0.28
RARA-206ENST00000425707 LINC01560Q8TB33 94 aa13.27□□□□□ -0.29
RARA-206ENST00000425707 TOMM6Q96B49 74 aa13.27□□□□□ -0.29
RARA-206ENST00000425707 ATMQ13315 3056 aa13.27□□□□□ -0.29
RARA-206ENST00000425707 CLEC3BP05452 202 aa13.26□□□□□ -0.29
RARA-206ENST00000425707 TRBV7-1A0A0A6YYK4 115 aa13.26□□□□□ -0.29
RARA-206ENST00000425707 MYMXA0A1B0GTQ4 84 aa13.26□□□□□ -0.29
RARA-206ENST00000425707 SPANXN1Q5VSR9 72 aa13.26□□□□□ -0.29
RARA-206ENST00000425707 METTL26Q96S19 204 aa13.26□□□□□ -0.29
RARA-206ENST00000425707 HIST1H4GQ99525 98 aa13.26□□□□□ -0.29
RARA-206ENST00000425707 C8orf86Q6ZUL3 223 aa13.25□□□□□ -0.29
RARA-206ENST00000425707 EEF1AKMT3Q96AZ1 226 aa13.25□□□□□ -0.29
RARA-206ENST00000425707 SMG1Q96Q15 3661 aaKnown RBP13.25□□□□□ -0.29
RARA-206ENST00000425707 M0R381 172 aa13.25□□□□□ -0.29
RARA-206ENST00000425707 MED14OSP0DP75 135 aa13.25□□□□□ -0.29
RARA-206ENST00000425707 C11orf71Q6IPW1 123 aa13.25□□□□□ -0.29
RARA-206ENST00000425707 CCDC140Q96MF4 163 aa13.25□□□□□ -0.29
RARA-206ENST00000425707 POLEQ07864 2286 aa13.25□□□□□ -0.29
RARA-206ENST00000425707 OR11H12B2RN74 326 aa13.24□□□□□ -0.29
RARA-206ENST00000425707 NEXN-AS1Q8NBZ9 246 aa13.24□□□□□ -0.29
RARA-206ENST00000425707 OR11H1Q8NG94 326 aa13.24□□□□□ -0.29
RARA-206ENST00000425707 OR11H2Q8NH07 326 aa13.24□□□□□ -0.29
RARA-206ENST00000425707 PRO0461Q9UI25 63 aa13.24□□□□□ -0.29
RARA-206ENST00000425707 UFC1Q9Y3C8 167 aa13.24□□□□□ -0.29
RARA-206ENST00000425707 GAGE12HA6NDE8 117 aa13.24□□□□□ -0.29
RARA-206ENST00000425707 WFDC2Q14508 124 aa13.23□□□□□ -0.29
RARA-206ENST00000425707 SIRPDQ9H106 197 aa13.23□□□□□ -0.29
RARA-206ENST00000425707 GAGE13Q4V321 117 aa13.23□□□□□ -0.29
RARA-206ENST00000425707 PCNX1Q96RV3 2341 aa13.23□□□□□ -0.29
RARA-206ENST00000425707 LINC01549A6NIU2 74 aa13.23□□□□□ -0.29
RARA-206ENST00000425707 PPP1R17O96001 155 aa13.23□□□□□ -0.29
RARA-206ENST00000425707 AZU1P20160 251 aa13.23□□□□□ -0.29
RARA-206ENST00000425707 PRR30Q53SZ7 412 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms