RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 OR51M1Q9H341 326 aa8.34□□□□□ -1.07
HLA-DQB3-203ENST00000425319 UBE2L5PA0A1B0GUS4 154 aa8.33□□□□□ -1.08
HLA-DQB3-203ENST00000425319 K7EQD1 137 aa8.33□□□□□ -1.08
HLA-DQB3-203ENST00000425319 PFN1P07737 140 aaKnown RBP8.33□□□□□ -1.08
HLA-DQB3-203ENST00000425319 DNAH10OSP0CZ25 163 aa8.33□□□□□ -1.08
HLA-DQB3-203ENST00000425319 KRTAP10-1P60331 282 aa8.33□□□□□ -1.08
HLA-DQB3-203ENST00000425319 S100A10P60903 97 aa8.33□□□□□ -1.08
HLA-DQB3-203ENST00000425319 FAM74A1Q5RGS3 127 aa8.33□□□□□ -1.08
HLA-DQB3-203ENST00000425319 EXOC3-AS1Q8N2X6 119 aa8.33□□□□□ -1.08
HLA-DQB3-203ENST00000425319 NHLRC2Q8NBF2 726 aa8.33□□□□□ -1.08
HLA-DQB3-203ENST00000425319 FAM19A4Q96LR4 140 aa8.33□□□□□ -1.08
HLA-DQB3-203ENST00000425319 C2orf50Q96LR7 162 aa8.33□□□□□ -1.08
HLA-DQB3-203ENST00000425319 TM2D2Q9BX73 214 aa8.33□□□□□ -1.08
HLA-DQB3-203ENST00000425319 MDFICQ9P1T7 246 aa8.33□□□□□ -1.08
HLA-DQB3-203ENST00000425319 IGHV3-38A0A0C4DH36 116 aa8.32□□□□□ -1.08
HLA-DQB3-203ENST00000425319 RBAKDNA6NC62 111 aa8.32□□□□□ -1.08
HLA-DQB3-203ENST00000425319 C17orf112F2Z3M2 114 aa8.32□□□□□ -1.08
HLA-DQB3-203ENST00000425319 CIDEAO60543 219 aa8.32□□□□□ -1.08
HLA-DQB3-203ENST00000425319 FUSP35637 526 aaKnown RBP eCLIP8.32□□□□□ -1.08
HLA-DQB3-203ENST00000425319 TDRG1Q3Y452 100 aa8.32□□□□□ -1.08
HLA-DQB3-203ENST00000425319 OR10G4Q8NGN3 311 aa8.32□□□□□ -1.08
HLA-DQB3-203ENST00000425319 TP53TG3Q9ULZ0 132 aa8.32□□□□□ -1.08
HLA-DQB3-203ENST00000425319 LENEPQ9Y5L5 61 aa8.32□□□□□ -1.08
HLA-DQB3-203ENST00000425319 IGKV2-40A0A087WW87 121 aaPredicted RBP8.31□□□□□ -1.08
HLA-DQB3-203ENST00000425319 IGKV2D-40P01614 121 aaPredicted RBP8.31□□□□□ -1.08
HLA-DQB3-203ENST00000425319 PYYP10082 97 aa8.31□□□□□ -1.08
HLA-DQB3-203ENST00000425319 VWC2Q2TAL6 325 aa8.31□□□□□ -1.08
HLA-DQB3-203ENST00000425319 MUC21Q5SSG8 566 aa8.31□□□□□ -1.08
HLA-DQB3-203ENST00000425319 WFDC10BQ8IUB3 73 aa8.31□□□□□ -1.08
HLA-DQB3-203ENST00000425319 RASL10AQ92737 203 aa8.31□□□□□ -1.08
HLA-DQB3-203ENST00000425319 PRADC1Q9BSG0 188 aa8.31□□□□□ -1.08
HLA-DQB3-203ENST00000425319 PAXXQ9BUH6 204 aa8.31□□□□□ -1.08
HLA-DQB3-203ENST00000425319 LYRM2Q9NU23 88 aaPredicted RBP8.31□□□□□ -1.08
HLA-DQB3-203ENST00000425319 TRAV4A0A0B4J268 109 aa8.3□□□□□ -1.08
HLA-DQB3-203ENST00000425319 CCSO14618 274 aa8.3□□□□□ -1.08
HLA-DQB3-203ENST00000425319 NDUFB4O95168 129 aa8.3□□□□□ -1.08
HLA-DQB3-203ENST00000425319 ZNF266Q14584 549 aa8.3□□□□□ -1.08
HLA-DQB3-203ENST00000425319 BAK1Q16611 211 aa8.3□□□□□ -1.08
HLA-DQB3-203ENST00000425319 TMEM183BQ1AE95 376 aa8.3□□□□□ -1.08
HLA-DQB3-203ENST00000425319 TMEM183AQ8IXX5 376 aa8.3□□□□□ -1.08
HLA-DQB3-203ENST00000425319 TMEM252Q8N6L7 170 aa8.3□□□□□ -1.08
HLA-DQB3-203ENST00000425319 ZFAND2AQ8N6M9 145 aa8.3□□□□□ -1.08
HLA-DQB3-203ENST00000425319 CMTM2Q8TAZ6 248 aa8.3□□□□□ -1.08
HLA-DQB3-203ENST00000425319 ZNF479Q96JC4 524 aa8.3□□□□□ -1.08
HLA-DQB3-203ENST00000425319 KCNS1Q96KK3 526 aa8.3□□□□□ -1.08
HLA-DQB3-203ENST00000425319 M0R2P5 195 aa8.29□□□□□ -1.08
HLA-DQB3-203ENST00000425319 OR7C2O60412 319 aa8.29□□□□□ -1.08
HLA-DQB3-203ENST00000425319 C1QBP02746 253 aa8.29□□□□□ -1.08
HLA-DQB3-203ENST00000425319 SFTA3P0C7M3 94 aa8.29□□□□□ -1.08
HLA-DQB3-203ENST00000425319 TIRAPP58753 221 aa8.29□□□□□ -1.08
HLA-DQB3-203ENST00000425319 TAS2R45P59539 299 aa8.29□□□□□ -1.08
HLA-DQB3-203ENST00000425319 RANP62826 216 aaKnown RBP8.29□□□□□ -1.08
HLA-DQB3-203ENST00000425319 OR10J3Q5JRS4 329 aa8.29□□□□□ -1.08
HLA-DQB3-203ENST00000425319 SYT8Q8NBV8 401 aa8.29□□□□□ -1.08
HLA-DQB3-203ENST00000425319 HSPG2P98160 4391 aa8.28□□□□□ -1.08
HLA-DQB3-203ENST00000425319 IBA57-AS1B1ANH7 110 aa8.28□□□□□ -1.08
HLA-DQB3-203ENST00000425319 TOR2AQ5JU69 321 aa8.28□□□□□ -1.08
HLA-DQB3-203ENST00000425319 DEFB104AQ8WTQ1 72 aa8.28□□□□□ -1.08
HLA-DQB3-203ENST00000425319 NPCDR1Q9BY65 106 aa8.28□□□□□ -1.08
HLA-DQB3-203ENST00000425319 NAGKQ9UJ70 344 aa8.28□□□□□ -1.08
HLA-DQB3-203ENST00000425319 TRAV21A0A0B4J279 112 aa8.27□□□□□ -1.09
HLA-DQB3-203ENST00000425319 TCRBP04435 133 aa8.27□□□□□ -1.09
HLA-DQB3-203ENST00000425319 OR10J4P0C629 311 aa8.27□□□□□ -1.09
HLA-DQB3-203ENST00000425319 LINC01556Q5JQF7 62 aa8.27□□□□□ -1.09
HLA-DQB3-203ENST00000425319 Q6AWC8 147 aa8.27□□□□□ -1.09
HLA-DQB3-203ENST00000425319 Q8N814 137 aa8.27□□□□□ -1.09
HLA-DQB3-203ENST00000425319 SLC25A2Q9BXI2 301 aa8.27□□□□□ -1.09
HLA-DQB3-203ENST00000425319 NMES1Q9C002 83 aa8.27□□□□□ -1.09
HLA-DQB3-203ENST00000425319 Q9HAA7 133 aa8.27□□□□□ -1.09
HLA-DQB3-203ENST00000425319 SDF2L1Q9HCN8 221 aa8.27□□□□□ -1.09
HLA-DQB3-203ENST00000425319 BATF3Q9NR55 127 aa8.27□□□□□ -1.09
HLA-DQB3-203ENST00000425319 COX11Q9Y6N1 276 aa8.27□□□□□ -1.09
HLA-DQB3-203ENST00000425319 TRAV6A0A075B6T7 132 aa8.26□□□□□ -1.09
HLA-DQB3-203ENST00000425319 FBLL1A6NHQ2 334 aaKnown RBP8.26□□□□□ -1.09
HLA-DQB3-203ENST00000425319 LYRM1O43325 122 aa8.26□□□□□ -1.09
HLA-DQB3-203ENST00000425319 SEC11BP0C7V7 166 aa8.26□□□□□ -1.09
HLA-DQB3-203ENST00000425319 IL7P13232 177 aa8.26□□□□□ -1.09
HLA-DQB3-203ENST00000425319 RAB32Q13637 225 aa8.26□□□□□ -1.09
HLA-DQB3-203ENST00000425319 SERTAD4-AS1Q5TG53 156 aa8.26□□□□□ -1.09
HLA-DQB3-203ENST00000425319 MIR17HGQ75NE6 70 aa8.26□□□□□ -1.09
HLA-DQB3-203ENST00000425319 SCGB1C1Q8TD33 95 aa8.26□□□□□ -1.09
HLA-DQB3-203ENST00000425319 TMED6Q8WW62 240 aa8.26□□□□□ -1.09
HLA-DQB3-203ENST00000425319 NDFIP1Q9BT67 221 aa8.26□□□□□ -1.09
HLA-DQB3-203ENST00000425319 TRAV8-3A0A0A6YYJ7 113 aa8.25□□□□□ -1.09
HLA-DQB3-203ENST00000425319 IGSF23A1L1A6 192 aa8.25□□□□□ -1.09
HLA-DQB3-203ENST00000425319 H2AFB2P0C5Z0 115 aa8.25□□□□□ -1.09
HLA-DQB3-203ENST00000425319 UBE2L3P68036 154 aaKnown RBP8.25□□□□□ -1.09
HLA-DQB3-203ENST00000425319 CYCSP99999 105 aaKnown RBP8.25□□□□□ -1.09
HLA-DQB3-203ENST00000425319 RHOHQ15669 191 aa8.25□□□□□ -1.09
HLA-DQB3-203ENST00000425319 KHDC3LQ587J8 217 aa8.25□□□□□ -1.09
HLA-DQB3-203ENST00000425319 OR5C1Q8NGR4 320 aa8.25□□□□□ -1.09
HLA-DQB3-203ENST00000425319 Q8TAT8 98 aa8.25□□□□□ -1.09
HLA-DQB3-203ENST00000425319 THAP6Q8TBB0 222 aa8.25□□□□□ -1.09
HLA-DQB3-203ENST00000425319 HYLS1Q96M11 299 aa8.25□□□□□ -1.09
HLA-DQB3-203ENST00000425319 K7EQM0 130 aa8.24□□□□□ -1.09
HLA-DQB3-203ENST00000425319 PRR9Q5T870 116 aa8.24□□□□□ -1.09
HLA-DQB3-203ENST00000425319 MZT2BQ6NZ67 158 aa8.24□□□□□ -1.09
HLA-DQB3-203ENST00000425319 ARL6IP6Q8N6S5 226 aa8.24□□□□□ -1.09
HLA-DQB3-203ENST00000425319 ATP6V0E2Q8NHE4 81 aa8.24□□□□□ -1.09
HLA-DQB3-203ENST00000425319 RMI2Q96E14 147 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms