RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 DSCR4P56555 118 aaPredicted RBP2.32□□□□□ -2.04
SF3B1-205ENST00000424674 DSCR10P59022 87 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 ZNF826PQ6ZT77 177 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 SLC25A26Q70HW3 274 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 ARL17AQ8IVW1 177 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 Q8N8P6 123 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 DYNLRB2Q8TF09 96 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 MUCL1Q96DR8 90 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 OR8B2Q96RD0 313 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 RABAC1Q9UI14 185 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 MAGI2Q86UL8 1455 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 SCAF11Q99590 1463 aaKnown RBP2.32□□□□□ -2.04
SF3B1-205ENST00000424674 ALPK3Q96L96 1907 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 MYH13Q9UKX3 1938 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 IGHV3OR16-8A0A075B7F1 116 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 A0A087WSZ3 146 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 TRAV3A0A0B4J244 114 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 E7EUB6 86 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 GNGT2O14610 69 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 PIRTP0C851 137 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 DEFA4P12838 97 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 RPL26P61254 145 aaKnown RBP2.31□□□□□ -2.04
SF3B1-205ENST00000424674 C1orf134Q5TEV5 83 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 TMEM136Q6ZRR5 245 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 SH2D6Q7Z4S9 175 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 ARPINQ7Z6K5 226 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 LYPD6Q86Y78 171 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 LINC00052Q96N35 136 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 UQCR10Q9UDW1 63 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 MINOS1-NBL1R4GNA1 71 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 S4R3C0 116 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 SVILO95425 2214 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 CPSF1Q10570 1443 aaKnown RBP2.31□□□□□ -2.04
SF3B1-205ENST00000424674 ZNF646O15015 1829 aaPredicted RBP2.31□□□□□ -2.04
SF3B1-205ENST00000424674 CCDC88AQ3V6T2 1871 aa2.31□□□□□ -2.04
SF3B1-205ENST00000424674 NUP205Q92621 2012 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 IGLV10-54A0A075B6I4 117 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 IGLV3-12A0A075B6K2 115 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 A6NIN4 97 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 PSCAO43653 123 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 SSR2P43308 183 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 KRTDAPP60985 99 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 ZNF345Q14585 488 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 SPINK14Q6IE38 97 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 SPINT4Q6UDR6 99 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 UNQ5815/PRO19632Q6UWF5 114 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 LINC00269Q8N2A0 174 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 OR8B3Q8NGG8 313 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 TMEM254Q8TBM7 123 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 TMEM141Q96I45 108 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 SMCO4Q9NRQ5 59 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 CLIP1P30622 1438 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 C10orf71Q711Q0 1435 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 CHD1O14646 1710 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 CITO14578 2027 aa2.3□□□□□ -2.04
SF3B1-205ENST00000424674 MYO5AQ9Y4I1 1855 aaKnown RBP2.29□□□□□ -2.04
SF3B1-205ENST00000424674 PXDNLA1KZ92 1463 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 PLEKHH2Q8IVE3 1493 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 ABCC5O15440 1437 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 IGKV1D-42A0A075B6H8 117 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 IGLC7A0M8Q6 106 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 B4DSR2 109 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 MIFP14174 115 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 ADCYAP1P18509 176 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 CASC2Q6XLA1 102 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 COMMD6Q7Z4G1 85 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 FAM19A2Q8N3H0 131 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 PMCHL2Q9BQD1 86 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 HIGD2AQ9BW72 106 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 REG4Q9BYZ8 158 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 ANKRD12Q6UB98 2062 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 PTPRBP23467 1997 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 TANC2Q9HCD6 1990 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 SCN8AQ9UQD0 1980 aa2.29□□□□□ -2.04
SF3B1-205ENST00000424674 TRPM3Q9HCF6 1732 aaPredicted RBP2.28□□□□□ -2.04
SF3B1-205ENST00000424674 CCDC88BA6NC98 1476 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 ERVK-7P63135 1459 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 IFT140Q96RY7 1462 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 DAPK1P53355 1430 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 CASKIN1Q8WXD9 1431 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 PLIN4Q96Q06 1357 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 TRAV1-1A0A0B4J248 108 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 A0A0J9YX75 114 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 TRBV7-7A0A0K0K1E9 115 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 HMSDA8MTL9 139 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 IBA57-AS1B1ANH7 110 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 ATOX1O00244 68 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 WISP3O95389 354 aaPredicted RBP2.28□□□□□ -2.04
SF3B1-205ENST00000424674 SFT2D2O95562 160 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 IGKCP01834 107 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 APOC3P02656 99 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 NMBP08949 121 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 SLC25A6P12236 298 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 CBLN1P23435 193 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 INSL4Q14641 139 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 ZNF79Q15937 498 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 Q1T7F1 81 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 RPL7L1Q6DKI1 246 aaKnown RBP2.28□□□□□ -2.04
SF3B1-205ENST00000424674 ALKAL2Q6UX46 152 aa2.28□□□□□ -2.04
SF3B1-205ENST00000424674 S100A16Q96FQ6 103 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms