RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 GUK1Q16774 197 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 MUC21Q5SSG8 566 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 OR1L4Q8NGR5 311 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 Q8TAT8 98 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 ZNF479Q96JC4 524 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 LINC00477Q96M19 166 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 LINC00467Q9BRT7 94 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 SLC39A9Q9NUM3 307 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 UQCC1Q9NVA1 299 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 PRO0255Q9UI72 69 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 RNF24Q9Y225 148 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 TIMM9Q9Y5J7 89 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 K7EQD1 137 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 RGS13O14921 159 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 ZNF253O75346 499 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 SIX6O95475 246 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 C1QBP02746 253 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 HIST1H1EP10412 219 aaKnown RBP5.46□□□□□ -1.54
VIM-202ENST00000421459 CRISP2P16562 243 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 RPL29P47914 159 aaKnown RBP5.46□□□□□ -1.54
VIM-202ENST00000421459 CYCSP99999 105 aaKnown RBP5.46□□□□□ -1.54
VIM-202ENST00000421459 BAXQ07812 192 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 RAB31Q13636 194 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 MRPL23Q16540 153 aaKnown RBP5.46□□□□□ -1.54
VIM-202ENST00000421459 CDPF1Q6NVV7 123 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 C9orf47Q6ZRZ4 202 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 MIR17HGQ75NE6 70 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 NEGR1Q7Z3B1 354 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 MRPL53Q96EL3 112 aaKnown RBP5.46□□□□□ -1.54
VIM-202ENST00000421459 C2orf50Q96LR7 162 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 SLC25A2Q9BXI2 301 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 NMES1Q9C002 83 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 MSRB1Q9NZV6 116 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 FAM30AQ9NZY2 134 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 LY96Q9Y6Y9 160 aa5.46□□□□□ -1.54
VIM-202ENST00000421459 TRGV4A0A0C4DH28 118 aa5.45□□□□□ -1.54
VIM-202ENST00000421459 C5orf51A6NDU8 294 aa5.45□□□□□ -1.54
VIM-202ENST00000421459 EIF3GO75821 320 aaKnown RBP eCLIP5.45□□□□□ -1.54
VIM-202ENST00000421459 GYPEP15421 78 aa5.45□□□□□ -1.54
VIM-202ENST00000421459 FGF7P21781 194 aa5.45□□□□□ -1.54
VIM-202ENST00000421459 S100A10P60903 97 aa5.45□□□□□ -1.54
VIM-202ENST00000421459 ZNF415Q09FC8 603 aa5.45□□□□□ -1.54
VIM-202ENST00000421459 VWC2Q2TAL6 325 aa5.45□□□□□ -1.54
VIM-202ENST00000421459 ZFP69Q49AA0 526 aa5.45□□□□□ -1.54
VIM-202ENST00000421459 IBA57Q5T440 356 aaKnown RBP5.45□□□□□ -1.54
VIM-202ENST00000421459 NFE4Q86UQ8 179 aa5.45□□□□□ -1.54
VIM-202ENST00000421459 OR2T35Q8NGX2 323 aa5.45□□□□□ -1.54
VIM-202ENST00000421459 FAM167A-AS1Q96KT0 104 aa5.45□□□□□ -1.54
VIM-202ENST00000421459 PFDN5Q99471 154 aa5.45□□□□□ -1.54
VIM-202ENST00000421459 ARPC5LQ9BPX5 153 aa5.45□□□□□ -1.54
VIM-202ENST00000421459 MRPL32Q9BYC8 188 aaKnown RBP5.45□□□□□ -1.54
VIM-202ENST00000421459 TMEM14CQ9P0S9 112 aa5.45□□□□□ -1.54
VIM-202ENST00000421459 ZNF492Q9P255 531 aa5.45□□□□□ -1.54
VIM-202ENST00000421459 TRAV9-2A0A087WT02 112 aa5.44□□□□□ -1.54
VIM-202ENST00000421459 IGHV3-16A0A0C4DH30 117 aa5.44□□□□□ -1.54
VIM-202ENST00000421459 OR10J4P0C629 311 aa5.44□□□□□ -1.54
VIM-202ENST00000421459 SRIP30626 198 aa5.44□□□□□ -1.54
VIM-202ENST00000421459 Q5BKY6 102 aa5.44□□□□□ -1.54
VIM-202ENST00000421459 TMEM78Q5T7P6 136 aa5.44□□□□□ -1.54
VIM-202ENST00000421459 TMEM252Q8N6L7 170 aa5.44□□□□□ -1.54
VIM-202ENST00000421459 OR11H4Q8NGC9 324 aa5.44□□□□□ -1.54
VIM-202ENST00000421459 THAP6Q8TBB0 222 aa5.44□□□□□ -1.54
VIM-202ENST00000421459 PPP1R1CQ8WVI7 109 aa5.44□□□□□ -1.54
VIM-202ENST00000421459 PHYHIPLQ96FC7 376 aa5.44□□□□□ -1.54
VIM-202ENST00000421459 HYLS1Q96M11 299 aa5.44□□□□□ -1.54
VIM-202ENST00000421459 PRELID1Q9Y255 219 aa5.44□□□□□ -1.54
VIM-202ENST00000421459 DMBT1Q9UGM3 2413 aaPredicted RBP5.44□□□□□ -1.54
VIM-202ENST00000421459 IGLV5-52A0A0A0MRZ9 124 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 LRCOL1A6NCL2 159 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 HMSDA8MTL9 139 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 FAM229AH3BQW9 127 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 SMLR1H3BR10 107 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 GNRH2O43555 120 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 MPC2O95563 127 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 CRYGDP07320 174 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 NBEAP1P0C6P0 100 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 EVI2AP22794 236 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 S100A11P31949 105 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 SULT1A1P50225 295 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 ZNF138P52744 262 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 NHLH2Q02577 135 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 SLAQ13239 276 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 RAB32Q13637 225 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 TMEM183BQ1AE95 376 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 TMEM183AQ8IXX5 376 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 FXYD5Q96DB9 178 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 NPCDR1Q9BY65 106 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 AAMDCQ9H7C9 122 aa5.43□□□□□ -1.54
VIM-202ENST00000421459 LYRM2Q9NU23 88 aaPredicted RBP5.43□□□□□ -1.54
VIM-202ENST00000421459 H0YIZ8 118 aa5.42□□□□□ -1.54
VIM-202ENST00000421459 NMBP08949 121 aa5.42□□□□□ -1.54
VIM-202ENST00000421459 RANP62826 216 aaKnown RBP5.42□□□□□ -1.54
VIM-202ENST00000421459 PDE6HQ13956 83 aa5.42□□□□□ -1.54
VIM-202ENST00000421459 Q6ZSN1 163 aa5.42□□□□□ -1.54
VIM-202ENST00000421459 C9orf62Q8N4C0 152 aa5.42□□□□□ -1.54
VIM-202ENST00000421459 OR10G4Q8NGN3 311 aa5.42□□□□□ -1.54
VIM-202ENST00000421459 PAXXQ9BUH6 204 aa5.42□□□□□ -1.54
VIM-202ENST00000421459 SLC25A31Q9H0C2 315 aa5.42□□□□□ -1.54
VIM-202ENST00000421459 OR51M1Q9H341 326 aa5.42□□□□□ -1.54
VIM-202ENST00000421459 Q9HAA7 133 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms