RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 OR5AC2Q9NZP5 309 aa11.95□□□□□ -0.5
MSH6-203ENST00000420813 SIX6O95475 246 aa11.94□□□□□ -0.5
MSH6-203ENST00000420813 ZNF138P52744 262 aa11.94□□□□□ -0.5
MSH6-203ENST00000420813 CYCSP99999 105 aaKnown RBP11.94□□□□□ -0.5
MSH6-203ENST00000420813 ARPC5LQ9BPX5 153 aa11.94□□□□□ -0.5
MSH6-203ENST00000420813 ICOSQ9Y6W8 199 aa11.94□□□□□ -0.5
MSH6-203ENST00000420813 RBAKDNA6NC62 111 aa11.93□□□□□ -0.5
MSH6-203ENST00000420813 C17orf112F2Z3M2 114 aa11.93□□□□□ -0.5
MSH6-203ENST00000420813 PAX4O43316 350 aa11.93□□□□□ -0.5
MSH6-203ENST00000420813 SLAQ13239 276 aa11.93□□□□□ -0.5
MSH6-203ENST00000420813 ZFP69Q49AA0 526 aa11.93□□□□□ -0.5
MSH6-203ENST00000420813 LRRC37A5PQ49AS3 106 aa11.93□□□□□ -0.5
MSH6-203ENST00000420813 LYPD1Q8N2G4 141 aa11.93□□□□□ -0.5
MSH6-203ENST00000420813 MAPKAPK5-AS1Q8N8E1 139 aa11.93□□□□□ -0.5
MSH6-203ENST00000420813 PHYHIPLQ96FC7 376 aa11.93□□□□□ -0.5
MSH6-203ENST00000420813 PRO0255Q9UI72 69 aa11.93□□□□□ -0.5
MSH6-203ENST00000420813 TP53TG3Q9ULZ0 132 aa11.93□□□□□ -0.5
MSH6-203ENST00000420813 APOBP04114 4563 aaKnown RBP11.92□□□□□ -0.5
MSH6-203ENST00000420813 H0YIZ8 118 aa11.92□□□□□ -0.5
MSH6-203ENST00000420813 SIVA1O15304 175 aa11.92□□□□□ -0.5
MSH6-203ENST00000420813 OR10J4P0C629 311 aa11.92□□□□□ -0.5
MSH6-203ENST00000420813 CSN1S1P47710 185 aa11.92□□□□□ -0.5
MSH6-203ENST00000420813 LINC00315P59091 139 aa11.92□□□□□ -0.5
MSH6-203ENST00000420813 ZNF415Q09FC8 603 aa11.92□□□□□ -0.5
MSH6-203ENST00000420813 MRPL16Q9NX20 251 aaKnown RBP11.92□□□□□ -0.5
MSH6-203ENST00000420813 OR7C2O60412 319 aa11.91□□□□□ -0.5
MSH6-203ENST00000420813 ZNF266Q14584 549 aa11.91□□□□□ -0.5
MSH6-203ENST00000420813 Q6ZQT7 251 aa11.91□□□□□ -0.5
MSH6-203ENST00000420813 Q8TAT8 98 aa11.91□□□□□ -0.5
MSH6-203ENST00000420813 ASB13Q8WXK3 278 aa11.91□□□□□ -0.5
MSH6-203ENST00000420813 DNAH5Q8TE73 4624 aa11.91□□□□□ -0.5
MSH6-203ENST00000420813 GIPP09681 153 aaPredicted RBP11.9□□□□□ -0.5
MSH6-203ENST00000420813 CRYBA4P53673 196 aa11.9□□□□□ -0.5
MSH6-203ENST00000420813 KRTAP10-2P60368 255 aa11.9□□□□□ -0.5
MSH6-203ENST00000420813 Q6ZRN7 208 aaPredicted RBP11.9□□□□□ -0.5
MSH6-203ENST00000420813 ATP5SQ99766 215 aa11.9□□□□□ -0.5
MSH6-203ENST00000420813 LENEPQ9Y5L5 61 aa11.9□□□□□ -0.5
MSH6-203ENST00000420813 NXPH4O95158 308 aa11.89□□□□□ -0.51
MSH6-203ENST00000420813 IGHV3-53P01767 116 aa11.89□□□□□ -0.51
MSH6-203ENST00000420813 RANP62826 216 aaKnown RBP11.89□□□□□ -0.51
MSH6-203ENST00000420813 UBE2L3P68036 154 aaKnown RBP11.89□□□□□ -0.51
MSH6-203ENST00000420813 FHL2Q14192 279 aa11.89□□□□□ -0.51
MSH6-203ENST00000420813 MRPL23Q16540 153 aaKnown RBP11.89□□□□□ -0.51
MSH6-203ENST00000420813 Q8N1X5 172 aa11.89□□□□□ -0.51
MSH6-203ENST00000420813 PPP1R1CQ8WVI7 109 aa11.89□□□□□ -0.51
MSH6-203ENST00000420813 HHLA3Q9XRX5 114 aa11.89□□□□□ -0.51
MSH6-203ENST00000420813 C1QBP02746 253 aa11.88□□□□□ -0.51
MSH6-203ENST00000420813 PET100P0DJ07 73 aa11.88□□□□□ -0.51
MSH6-203ENST00000420813 H2BFSP57053 126 aa11.88□□□□□ -0.51
MSH6-203ENST00000420813 TAS2R45P59539 299 aa11.88□□□□□ -0.51
MSH6-203ENST00000420813 KHDC3LQ587J8 217 aa11.88□□□□□ -0.51
MSH6-203ENST00000420813 Q6AWC8 147 aa11.88□□□□□ -0.51
MSH6-203ENST00000420813 HSPB11Q9Y547 144 aa11.88□□□□□ -0.51
MSH6-203ENST00000420813 DIRC3C9JPN6 131 aa11.87□□□□□ -0.51
MSH6-203ENST00000420813 FFAR4Q5NUL3 377 aa11.87□□□□□ -0.51
MSH6-203ENST00000420813 LYPD5Q6UWN5 251 aa11.87□□□□□ -0.51
MSH6-203ENST00000420813 IQCF2Q8IXL9 164 aa11.87□□□□□ -0.51
MSH6-203ENST00000420813 TMED6Q8WW62 240 aa11.87□□□□□ -0.51
MSH6-203ENST00000420813 C8orf49Q96NF6 230 aa11.87□□□□□ -0.51
MSH6-203ENST00000420813 SPXQ9BT56 116 aa11.87□□□□□ -0.51
MSH6-203ENST00000420813 MPC2O95563 127 aa11.86□□□□□ -0.51
MSH6-203ENST00000420813 MUC21Q5SSG8 566 aa11.86□□□□□ -0.51
MSH6-203ENST00000420813 NEGR1Q7Z3B1 354 aa11.86□□□□□ -0.51
MSH6-203ENST00000420813 OR10G4Q8NGN3 311 aa11.86□□□□□ -0.51
MSH6-203ENST00000420813 RASL10AQ92737 203 aa11.86□□□□□ -0.51
MSH6-203ENST00000420813 TRGV11A0A075B6L2 103 aa11.85□□□□□ -0.51
MSH6-203ENST00000420813 TRGV4A0A0C4DH28 118 aa11.85□□□□□ -0.51
MSH6-203ENST00000420813 IFNA5P01569 189 aa11.85□□□□□ -0.51
MSH6-203ENST00000420813 FAM159AQ6UWV7 190 aa11.85□□□□□ -0.51
MSH6-203ENST00000420813 SCGB1C1Q8TD33 95 aa11.85□□□□□ -0.51
MSH6-203ENST00000420813 MDFICQ9P1T7 246 aa11.85□□□□□ -0.51
MSH6-203ENST00000420813 K7EP13 123 aa11.84□□□□□ -0.51
MSH6-203ENST00000420813 TMEM183BQ1AE95 376 aa11.84□□□□□ -0.51
MSH6-203ENST00000420813 TDRG1Q3Y452 100 aa11.84□□□□□ -0.51
MSH6-203ENST00000420813 NFE4Q86UQ8 179 aa11.84□□□□□ -0.51
MSH6-203ENST00000420813 TMEM183AQ8IXX5 376 aa11.84□□□□□ -0.51
MSH6-203ENST00000420813 ARL6IP6Q8N6S5 226 aa11.84□□□□□ -0.51
MSH6-203ENST00000420813 OR2T35Q8NGX2 323 aa11.84□□□□□ -0.51
MSH6-203ENST00000420813 OTORQ9NRC9 128 aa11.84□□□□□ -0.51
MSH6-203ENST00000420813 PGPEP1Q9NXJ5 209 aa11.84□□□□□ -0.51
MSH6-203ENST00000420813 TRAV9-2A0A087WT02 112 aa11.83□□□□□ -0.52
MSH6-203ENST00000420813 EREGO14944 169 aa11.83□□□□□ -0.52
MSH6-203ENST00000420813 ORM1P02763 201 aa11.83□□□□□ -0.52
MSH6-203ENST00000420813 RPL12P30050 165 aaKnown RBP11.83□□□□□ -0.52
MSH6-203ENST00000420813 SRIP30626 198 aa11.83□□□□□ -0.52
MSH6-203ENST00000420813 ERVFC1-1P60608 527 aa11.83□□□□□ -0.52
MSH6-203ENST00000420813 FAM74A1Q5RGS3 127 aa11.83□□□□□ -0.52
MSH6-203ENST00000420813 ZNF479Q96JC4 524 aa11.83□□□□□ -0.52
MSH6-203ENST00000420813 HYLS1Q96M11 299 aa11.83□□□□□ -0.52
MSH6-203ENST00000420813 SCRT2Q9NQ03 307 aa11.83□□□□□ -0.52
MSH6-203ENST00000420813 K7EQD1 137 aa11.82□□□□□ -0.52
MSH6-203ENST00000420813 SFTA3P0C7M3 94 aa11.82□□□□□ -0.52
MSH6-203ENST00000420813 CDPF1Q6NVV7 123 aa11.82□□□□□ -0.52
MSH6-203ENST00000420813 PQLC2Q6ZP29 291 aa11.82□□□□□ -0.52
MSH6-203ENST00000420813 CMTM2Q8TAZ6 248 aa11.82□□□□□ -0.52
MSH6-203ENST00000420813 PCNPQ8WW12 178 aaKnown RBP11.82□□□□□ -0.52
MSH6-203ENST00000420813 SMIM3Q9BZL3 60 aa11.82□□□□□ -0.52
MSH6-203ENST00000420813 LY96Q9Y6Y9 160 aa11.82□□□□□ -0.52
MSH6-203ENST00000420813 TRAV4A0A0B4J268 109 aa11.81□□□□□ -0.52
MSH6-203ENST00000420813 PGPA6NDG6 321 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms