RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 KIR2DL5BA0A0G2JN68 375 aa9.13□□□□□ -0.95
TMEM53-206ENST00000420706 KIR2DL5BA0A0G2JPC4 375 aa9.13□□□□□ -0.95
TMEM53-206ENST00000420706 PGPEP1LA6NFU8 196 aa9.13□□□□□ -0.95
TMEM53-206ENST00000420706 AMBPP02760 352 aa9.13□□□□□ -0.95
TMEM53-206ENST00000420706 FRMD6-AS1P0C7T7 363 aa9.13□□□□□ -0.95
TMEM53-206ENST00000420706 SMUG1Q53HV7 270 aa9.13□□□□□ -0.95
TMEM53-206ENST00000420706 DEFB121Q5J5C9 76 aa9.13□□□□□ -0.95
TMEM53-206ENST00000420706 PRR9Q5T870 116 aa9.13□□□□□ -0.95
TMEM53-206ENST00000420706 KIR2DL5AQ8N109 375 aa9.13□□□□□ -0.95
TMEM53-206ENST00000420706 KIR2DL5BQ8NHK3 375 aa9.13□□□□□ -0.95
TMEM53-206ENST00000420706 XCL2Q9UBD3 114 aa9.13□□□□□ -0.95
TMEM53-206ENST00000420706 LY96Q9Y6Y9 160 aa9.13□□□□□ -0.95
TMEM53-206ENST00000420706 NBEAL1Q6ZS30 2694 aa9.12□□□□□ -0.95
TMEM53-206ENST00000420706 GCGP01275 180 aa9.12□□□□□ -0.95
TMEM53-206ENST00000420706 RNASE4P34096 147 aaKnown RBP9.12□□□□□ -0.95
TMEM53-206ENST00000420706 CRIP1P50238 77 aa9.12□□□□□ -0.95
TMEM53-206ENST00000420706 ZNF80P51504 273 aaPredicted RBP9.12□□□□□ -0.95
TMEM53-206ENST00000420706 APOC4P55056 127 aa9.12□□□□□ -0.95
TMEM53-206ENST00000420706 BTN1A1Q13410 526 aa9.12□□□□□ -0.95
TMEM53-206ENST00000420706 TMEM241Q24JQ0 296 aa9.12□□□□□ -0.95
TMEM53-206ENST00000420706 GFI1BQ5VTD9 330 aa9.12□□□□□ -0.95
TMEM53-206ENST00000420706 SMIM12Q96EX1 92 aa9.12□□□□□ -0.95
TMEM53-206ENST00000420706 ZC2HC1AQ96GY0 325 aa9.12□□□□□ -0.95
TMEM53-206ENST00000420706 C1QTNF4Q9BXJ3 329 aa9.12□□□□□ -0.95
TMEM53-206ENST00000420706 NAT8Q9UHE5 227 aa9.12□□□□□ -0.95
TMEM53-206ENST00000420706 C7orf71A4D174 169 aa9.11□□□□□ -0.95
TMEM53-206ENST00000420706 F8W036 122 aa9.11□□□□□ -0.95
TMEM53-206ENST00000420706 UBE2CO00762 179 aa9.11□□□□□ -0.95
TMEM53-206ENST00000420706 ZNF324O75467 553 aaPredicted RBP9.11□□□□□ -0.95
TMEM53-206ENST00000420706 CA1P00915 261 aaPredicted RBP9.11□□□□□ -0.95
TMEM53-206ENST00000420706 ADCYAP1P18509 176 aa9.11□□□□□ -0.95
TMEM53-206ENST00000420706 Q6AWC8 147 aa9.11□□□□□ -0.95
TMEM53-206ENST00000420706 Q6ZQT7 251 aa9.11□□□□□ -0.95
TMEM53-206ENST00000420706 CSNK1G2-AS1Q8NCQ2 148 aa9.11□□□□□ -0.95
TMEM53-206ENST00000420706 SEC11CQ9BY50 192 aa9.11□□□□□ -0.95
TMEM53-206ENST00000420706 SDF2L1Q9HCN8 221 aa9.11□□□□□ -0.95
TMEM53-206ENST00000420706 TRAV12-3A0A0B4J271 114 aa9.1□□□□□ -0.95
TMEM53-206ENST00000420706 FABP5P3A8MUU1 101 aa9.1□□□□□ -0.95
TMEM53-206ENST00000420706 K7EN84 100 aa9.1□□□□□ -0.95
TMEM53-206ENST00000420706 RBMY1A1P0DJD3 496 aaKnown RBP9.1□□□□□ -0.95
TMEM53-206ENST00000420706 RBMY1CP0DJD4 496 aa9.1□□□□□ -0.95
TMEM53-206ENST00000420706 MGST1P10620 155 aaKnown RBP9.1□□□□□ -0.95
TMEM53-206ENST00000420706 RPL23P62829 140 aaKnown RBP9.1□□□□□ -0.95
TMEM53-206ENST00000420706 OR5I1Q13606 314 aa9.1□□□□□ -0.95
TMEM53-206ENST00000420706 RBMY1FQ15415 496 aaKnown RBP9.1□□□□□ -0.95
TMEM53-206ENST00000420706 C10orf91Q5T1B1 145 aa9.1□□□□□ -0.95
TMEM53-206ENST00000420706 LINC01551Q86U37 167 aa9.1□□□□□ -0.95
TMEM53-206ENST00000420706 C1orf158Q8N1D5 194 aa9.1□□□□□ -0.95
TMEM53-206ENST00000420706 MRAPQ8TCY5 172 aa9.1□□□□□ -0.95
TMEM53-206ENST00000420706 C20orf144Q9BQM9 153 aa9.1□□□□□ -0.95
TMEM53-206ENST00000420706 TRAV21A0A0B4J279 112 aa9.09□□□□□ -0.95
TMEM53-206ENST00000420706 INSP01308 110 aa9.09□□□□□ -0.95
TMEM53-206ENST00000420706 PFN1P07737 140 aaKnown RBP9.09□□□□□ -0.95
TMEM53-206ENST00000420706 NIPSNAP3BQ9BS92 247 aa9.09□□□□□ -0.95
TMEM53-206ENST00000420706 BIN3Q9NQY0 253 aa9.09□□□□□ -0.95
TMEM53-206ENST00000420706 SH2D1AO60880 128 aa9.08□□□□□ -0.96
TMEM53-206ENST00000420706 FAM162BQ5T6X4 162 aa9.08□□□□□ -0.96
TMEM53-206ENST00000420706 PRR27Q6MZM9 219 aa9.08□□□□□ -0.96
TMEM53-206ENST00000420706 SBSPONQ8IVN8 264 aa9.08□□□□□ -0.96
TMEM53-206ENST00000420706 C19orf71A6NCJ1 209 aa9.07□□□□□ -0.96
TMEM53-206ENST00000420706 KRBOX1C9JBD0 128 aa9.07□□□□□ -0.96
TMEM53-206ENST00000420706 ADIRFQ15847 76 aa9.07□□□□□ -0.96
TMEM53-206ENST00000420706 ZNF705AQ6ZN79 300 aaPredicted RBP9.07□□□□□ -0.96
TMEM53-206ENST00000420706 Q6ZWC4 215 aa9.07□□□□□ -0.96
TMEM53-206ENST00000420706 NUDT10Q8NFP7 164 aa9.07□□□□□ -0.96
TMEM53-206ENST00000420706 ISOC2Q96AB3 205 aa9.07□□□□□ -0.96
TMEM53-206ENST00000420706 NUDT11Q96G61 164 aa9.07□□□□□ -0.96
TMEM53-206ENST00000420706 LINC01587Q99440 93 aa9.07□□□□□ -0.96
TMEM53-206ENST00000420706 C11orf21Q9P2W6 132 aa9.07□□□□□ -0.96
TMEM53-206ENST00000420706 CARHSP1Q9Y2V2 147 aaKnown RBP9.07□□□□□ -0.96
TMEM53-206ENST00000420706 GOLT1BQ9Y3E0 138 aa9.07□□□□□ -0.96
TMEM53-206ENST00000420706 IGKV3D-20A0A0C4DH25 116 aa9.06□□□□□ -0.96
TMEM53-206ENST00000420706 H7BYZ3 331 aa9.06□□□□□ -0.96
TMEM53-206ENST00000420706 PNRC1Q12796 327 aaPredicted RBP9.06□□□□□ -0.96
TMEM53-206ENST00000420706 DEFB135Q30KP9 77 aa9.06□□□□□ -0.96
TMEM53-206ENST00000420706 FAM231DQ6ZW35 169 aa9.06□□□□□ -0.96
TMEM53-206ENST00000420706 TMEM256Q8N2U0 113 aa9.06□□□□□ -0.96
TMEM53-206ENST00000420706 RNF183Q96D59 192 aa9.06□□□□□ -0.96
TMEM53-206ENST00000420706 DAZAP1Q96EP5 407 aaKnown RBP9.06□□□□□ -0.96
TMEM53-206ENST00000420706 RNASE7Q9H1E1 156 aaKnown RBP9.06□□□□□ -0.96
TMEM53-206ENST00000420706 IGHV3OR16-12A0A075B7B8 117 aa9.05□□□□□ -0.96
TMEM53-206ENST00000420706 IGHV1OR15-1A0A075B7D0 117 aa9.05□□□□□ -0.96
TMEM53-206ENST00000420706 SPRY2O43597 315 aa9.05□□□□□ -0.96
TMEM53-206ENST00000420706 ORM1P02763 201 aa9.05□□□□□ -0.96
TMEM53-206ENST00000420706 PRM2P04554 102 aa9.05□□□□□ -0.96
TMEM53-206ENST00000420706 ANXA2RQ3ZCQ2 193 aa9.05□□□□□ -0.96
TMEM53-206ENST00000420706 MUC21Q5SSG8 566 aa9.05□□□□□ -0.96
TMEM53-206ENST00000420706 FAM159AQ6UWV7 190 aa9.05□□□□□ -0.96
TMEM53-206ENST00000420706 ZNF575Q86XF7 245 aa9.05□□□□□ -0.96
TMEM53-206ENST00000420706 RCHY1Q96PM5 261 aa9.05□□□□□ -0.96
TMEM53-206ENST00000420706 PYGO2Q9BRQ0 406 aa9.05□□□□□ -0.96
TMEM53-206ENST00000420706 LINC00467Q9BRT7 94 aa9.05□□□□□ -0.96
TMEM53-206ENST00000420706 TMEM208Q9BTX3 173 aa9.05□□□□□ -0.96
TMEM53-206ENST00000420706 OSTCQ9NRP0 149 aa9.05□□□□□ -0.96
TMEM53-206ENST00000420706 GNRH2O43555 120 aa9.04□□□□□ -0.96
TMEM53-206ENST00000420706 ERVFC1-1P60608 527 aa9.04□□□□□ -0.96
TMEM53-206ENST00000420706 TDRG1Q3Y452 100 aa9.04□□□□□ -0.96
TMEM53-206ENST00000420706 LINC01559Q495D7 138 aa9.04□□□□□ -0.96
TMEM53-206ENST00000420706 IBA57Q5T440 356 aaKnown RBP9.04□□□□□ -0.96
TMEM53-206ENST00000420706 NEU1Q99519 415 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms