RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 DEFB113Q30KQ7 82 aa8.96□□□□□ -0.97
PTCH1-205ENST00000418258 DUX4L9Q6RFH8 374 aaPredicted RBP8.96□□□□□ -0.97
PTCH1-205ENST00000418258 SLAQ13239 276 aa8.96□□□□□ -0.97
PTCH1-205ENST00000418258 TRAV26-2A0A0B4J265 109 aa8.96□□□□□ -0.97
PTCH1-205ENST00000418258 hADV29S1A0JD25 119 aa8.96□□□□□ -0.97
PTCH1-205ENST00000418258 TMEM213A2RRL7 107 aa8.96□□□□□ -0.98
PTCH1-205ENST00000418258 ZNF134P52741 427 aa8.96□□□□□ -0.98
PTCH1-205ENST00000418258 NDUFAF3Q9BU61 184 aa8.96□□□□□ -0.98
PTCH1-205ENST00000418258 PCDH15Q96QU1 1955 aa8.96□□□□□ -0.98
PTCH1-205ENST00000418258 C9orf66Q5T8R8 295 aa8.96□□□□□ -0.98
PTCH1-205ENST00000418258 DEFB136Q30KP8 78 aa8.96□□□□□ -0.98
PTCH1-205ENST00000418258 A0A0G2JRQ6 117 aa8.96□□□□□ -0.98
PTCH1-205ENST00000418258 FGF16O43320 207 aa8.96□□□□□ -0.98
PTCH1-205ENST00000418258 TRBV24-1A0A075B6N3 115 aa8.95□□□□□ -0.98
PTCH1-205ENST00000418258 LY96Q9Y6Y9 160 aa8.95□□□□□ -0.98
PTCH1-205ENST00000418258 A0A1B0GUS0 222 aa8.95□□□□□ -0.98
PTCH1-205ENST00000418258 SOCS3O14543 225 aa8.95□□□□□ -0.98
PTCH1-205ENST00000418258 C17orf58Q2M2W7 97 aa8.95□□□□□ -0.98
PTCH1-205ENST00000418258 IGHV4-59P01825 116 aa8.95□□□□□ -0.98
PTCH1-205ENST00000418258 DEFB105AQ8NG35 78 aa8.95□□□□□ -0.98
PTCH1-205ENST00000418258 HOXB4P17483 251 aaPredicted RBP8.95□□□□□ -0.98
PTCH1-205ENST00000418258 QRFPP83859 136 aa8.95□□□□□ -0.98
PTCH1-205ENST00000418258 PLA2G2CQ5R387 149 aa8.95□□□□□ -0.98
PTCH1-205ENST00000418258 XCL1P47992 114 aa8.95□□□□□ -0.98
PTCH1-205ENST00000418258 RPL18AQ02543 176 aaKnown RBP8.95□□□□□ -0.98
PTCH1-205ENST00000418258 DEFB112Q30KQ8 113 aa8.95□□□□□ -0.98
PTCH1-205ENST00000418258 Q6ZS49 121 aa8.95□□□□□ -0.98
PTCH1-205ENST00000418258 IGHV1-24A0A0C4DH33 117 aa8.95□□□□□ -0.98
PTCH1-205ENST00000418258 IGLV3-9A0A075B6K5 115 aa8.94□□□□□ -0.98
PTCH1-205ENST00000418258 UBE2CO00762 179 aa8.94□□□□□ -0.98
PTCH1-205ENST00000418258 NBL1P41271 181 aa8.94□□□□□ -0.98
PTCH1-205ENST00000418258 IGHV7-4-1A0A0J9YVY3 117 aa8.94□□□□□ -0.98
PTCH1-205ENST00000418258 KIR3DS1Q14943 382 aa8.94□□□□□ -0.98
PTCH1-205ENST00000418258 A0A1B0GW64 132 aa8.94□□□□□ -0.98
PTCH1-205ENST00000418258 PRSS46E5RG02 174 aa8.94□□□□□ -0.98
PTCH1-205ENST00000418258 SDHAF1A6NFY7 115 aa8.94□□□□□ -0.98
PTCH1-205ENST00000418258 LMO1P25800 156 aa8.94□□□□□ -0.98
PTCH1-205ENST00000418258 Q6ZRM9 215 aa8.94□□□□□ -0.98
PTCH1-205ENST00000418258 NEGR1Q7Z3B1 354 aa8.94□□□□□ -0.98
PTCH1-205ENST00000418258 HIST3H2BBQ8N257 126 aa8.94□□□□□ -0.98
PTCH1-205ENST00000418258 ELANEP08246 267 aa8.94□□□□□ -0.98
PTCH1-205ENST00000418258 Q6ZQT7 251 aa8.94□□□□□ -0.98
PTCH1-205ENST00000418258 STPG4Q8N801 248 aa8.94□□□□□ -0.98
PTCH1-205ENST00000418258 TEX48A0A1B0GUV7 120 aa8.93□□□□□ -0.98
PTCH1-205ENST00000418258 IGHV2-5P01817 119 aa8.93□□□□□ -0.98
PTCH1-205ENST00000418258 INAFM2P0DMQ5 153 aa8.93□□□□□ -0.98
PTCH1-205ENST00000418258 RNASE13Q5GAN3 156 aaKnown RBP8.93□□□□□ -0.98
PTCH1-205ENST00000418258 PRSS33Q8NF86 280 aa8.93□□□□□ -0.98
PTCH1-205ENST00000418258 SMIM2Q9BVW6 85 aa8.93□□□□□ -0.98
PTCH1-205ENST00000418258 TRBV19A0A075B6N1 114 aa8.93□□□□□ -0.98
PTCH1-205ENST00000418258 LOXP28300 417 aaPredicted RBP8.93□□□□□ -0.98
PTCH1-205ENST00000418258 TCF15Q12870 199 aa8.93□□□□□ -0.98
PTCH1-205ENST00000418258 CYTL1Q9NRR1 136 aa8.93□□□□□ -0.98
PTCH1-205ENST00000418258 TPSG1Q9NRR2 321 aa8.93□□□□□ -0.98
PTCH1-205ENST00000418258 C2orf66Q6UXQ4 117 aa8.92□□□□□ -0.98
PTCH1-205ENST00000418258 Q6ZR03 302 aa8.92□□□□□ -0.98
PTCH1-205ENST00000418258 BUB3O43684 328 aa8.92□□□□□ -0.98
PTCH1-205ENST00000418258 FOXL2NBQ6ZUU3 175 aa8.92□□□□□ -0.98
PTCH1-205ENST00000418258 ATP6V0BQ99437 205 aa8.92□□□□□ -0.98
PTCH1-205ENST00000418258 PKIGQ9Y2B9 76 aa8.92□□□□□ -0.98
PTCH1-205ENST00000418258 MRPL53Q96EL3 112 aaKnown RBP8.92□□□□□ -0.98
PTCH1-205ENST00000418258 PTPN13Q12923 2485 aa8.92□□□□□ -0.98
PTCH1-205ENST00000418258 SONP18583 2426 aaKnown RBP8.92□□□□□ -0.98
PTCH1-205ENST00000418258 LY6G6EA0A0G2JKS1 128 aa8.92□□□□□ -0.98
PTCH1-205ENST00000418258 WISP1O95388 367 aa8.92□□□□□ -0.98
PTCH1-205ENST00000418258 SPINK8P0C7L1 97 aa8.92□□□□□ -0.98
PTCH1-205ENST00000418258 C3orf79P0CE67 100 aa8.92□□□□□ -0.98
PTCH1-205ENST00000418258 RHOHQ15669 191 aa8.92□□□□□ -0.98
PTCH1-205ENST00000418258 U3KQA8 63 aa8.92□□□□□ -0.98
PTCH1-205ENST00000418258 CRLF1O75462 422 aa8.91□□□□□ -0.98
PTCH1-205ENST00000418258 CCL18P55774 89 aa8.91□□□□□ -0.98
PTCH1-205ENST00000418258 TET2Q6N021 2002 aaPredicted RBP8.91□□□□□ -0.98
PTCH1-205ENST00000418258 C1orf43Q9BWL3 253 aa8.91□□□□□ -0.98
PTCH1-205ENST00000418258 U3KQE9 123 aa8.91□□□□□ -0.98
PTCH1-205ENST00000418258 TNRC6BQ9UPQ9 1833 aaKnown RBP8.91□□□□□ -0.98
PTCH1-205ENST00000418258 HAMPP81172 84 aa8.9□□□□□ -0.98
PTCH1-205ENST00000418258 TRAV12-1A0A0B4J245 112 aa8.9□□□□□ -0.98
PTCH1-205ENST00000418258 GP9P14770 177 aa8.9□□□□□ -0.98
PTCH1-205ENST00000418258 HERVK_113P63121 156 aa8.9□□□□□ -0.98
PTCH1-205ENST00000418258 FOXI2Q6ZQN5 318 aa8.9□□□□□ -0.98
PTCH1-205ENST00000418258 NDUFS7O75251 213 aa8.9□□□□□ -0.98
PTCH1-205ENST00000418258 MRPL51Q4U2R6 128 aaKnown RBP8.9□□□□□ -0.98
PTCH1-205ENST00000418258 Q8N8P6 123 aa8.9□□□□□ -0.98
PTCH1-205ENST00000418258 H3BRN7 92 aa8.9□□□□□ -0.98
PTCH1-205ENST00000418258 GRNP28799 593 aaKnown RBP8.9□□□□□ -0.98
PTCH1-205ENST00000418258 UBL5Q9BZL1 73 aa8.9□□□□□ -0.98
PTCH1-205ENST00000418258 SLURP1P55000 103 aa8.9□□□□□ -0.98
PTCH1-205ENST00000418258 APRG1Q8IVJ8 170 aa8.9□□□□□ -0.98
PTCH1-205ENST00000418258 MORN5Q5VZ52 161 aa8.9□□□□□ -0.99
PTCH1-205ENST00000418258 FAM104BQ5XKR9 115 aa8.9□□□□□ -0.99
PTCH1-205ENST00000418258 PIP4P1Q86T03 277 aa8.9□□□□□ -0.99
PTCH1-205ENST00000418258 WDR86Q86TI4 376 aa8.89□□□□□ -0.99
PTCH1-205ENST00000418258 PIFOQ8TCI5 191 aa8.89□□□□□ -0.99
PTCH1-205ENST00000418258 CFHR4Q92496 578 aa8.89□□□□□ -0.99
PTCH1-205ENST00000418258 PRR25Q96S07 402 aa8.89□□□□□ -0.99
PTCH1-205ENST00000418258 SRSF2Q01130 221 aaKnown RBP8.89□□□□□ -0.99
PTCH1-205ENST00000418258 DIAPH2-AS1Q14236 149 aa8.89□□□□□ -0.99
PTCH1-205ENST00000418258 MPV17L2Q567V2 206 aa8.89□□□□□ -0.99
PTCH1-205ENST00000418258 ZFHX2Q9C0A1 2572 aaPredicted RBP8.89□□□□□ -0.99
PTCH1-205ENST00000418258 TRAV13-2A0A0B4J235 113 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms