RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 ZNF586Q9NXT0 402 aa4.34□□□□□ -1.71
NIFKP3-201ENST00000417799 MDFICQ9P1T7 246 aa4.34□□□□□ -1.71
NIFKP3-201ENST00000417799 MLXQ9UH92 298 aa4.34□□□□□ -1.71
NIFKP3-201ENST00000417799 IGLV7-46A0A075B6I9 117 aa4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 TRBV19A0A075B6N1 114 aa4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 TRAV25A0A0B4J276 109 aa4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 A0A1W2PRE2 83 aa4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 H3BTX0 84 aa4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 SNRPCP09234 159 aaKnown RBP4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 PPT1P50897 306 aa4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 INSL3P51460 131 aa4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 PDE6HQ13956 83 aa4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 KRTAP21-3Q3LHN1 58 aa4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 Q6ZVQ6 151 aa4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 SPATA3Q8NHX4 192 aa4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 RNASE8Q8TDE3 154 aaKnown RBP4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 BLNKQ8WV28 456 aa4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 OVOL2Q9BRP0 275 aa4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 MCRIP2Q9BUT9 160 aaKnown RBP4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 MS4A6AQ9H2W1 248 aa4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 NRN1Q9NPD7 142 aa4.33□□□□□ -1.72
NIFKP3-201ENST00000417799 NOTCH3Q9UM47 2321 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 IGKV3-7A0A075B6H7 116 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 FAM74A7A6NL05 159 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 DNASE2O00115 360 aaPredicted RBP4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 SLC17A3O00476 420 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 ZNF253O75346 499 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 IFNA1P01562 189 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 IGLV1-51P01701 117 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 UBE2G2P60604 165 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 RANP62826 216 aaKnown RBP4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 PAFAH1B2P68402 229 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 PSG9Q00887 426 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 C9orf66Q5T8R8 295 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 SAMD13Q5VXD3 122 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 TMEM61Q8N0U2 210 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 LYPD1Q8N2G4 141 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 OR2K2Q8NGT1 345 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 OPRPNQ99935 248 aaPredicted RBP4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 SLC50A1Q9BRV3 221 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 NKX6-2Q9C056 277 aaPredicted RBP4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 MANBALQ9NQG1 85 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 OTORQ9NRC9 128 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 MED9Q9NWA0 146 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 GNG13Q9P2W3 67 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 YTHDF2Q9Y5A9 579 aaKnown RBP4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 ARL2-SNX15V9GYD0 113 aa4.32□□□□□ -1.72
NIFKP3-201ENST00000417799 TRAV2A0A0B4J234 112 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 TRAV8-2A0A0B4J237 113 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 LINC00862A6NCI5 91 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 IZUMO1RA6ND01 250 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 PGPA6NDG6 321 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 RBFOX3A6NFN3 312 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 K7EQG2 157 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 ISLRO14498 428 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 SOCS3O14543 225 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 BCL2P10415 239 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 IGLL1P15814 213 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 TAGLN2P37802 199 aaKnown RBP4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 ID1P41134 155 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 TFPI2P48307 235 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 GUCA2BQ16661 112 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 HAGHQ16775 308 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 ZNF506Q5JVG8 444 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 CD164L2Q6UWJ8 174 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 EXOC3-AS1Q8N2X6 119 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 DCANP1Q8TF63 244 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 FAM210AQ96ND0 272 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 SPAG8Q99932 426 aaPredicted RBP4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 RARRES2Q99969 163 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 TXNDC17Q9BRA2 123 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 GPR61Q9BZJ8 451 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 Q9H3A6 140 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 ZNF331Q9NQX6 463 aaPredicted RBP4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 CLEC5AQ9NY25 188 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 VAX2Q9UIW0 290 aa4.31□□□□□ -1.72
NIFKP3-201ENST00000417799 RAB19A4D1S5 217 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 OR4C46A6NHA9 309 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 GGTLC3B5MD39 225 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 C11orf94C9JXX5 98 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 K7EQD1 137 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 SLC25A5P05141 298 aaKnown RBP4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 CSN1S1P47710 185 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 ATP5G3P48201 142 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 SNRPD3P62318 126 aaKnown RBP4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 MEF2BQ02080 365 aaPredicted RBP4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 PEA15Q15121 130 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 PSG3Q16557 428 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 ZC2HC1BQ5TFG8 222 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 LCN12Q6JVE5 192 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 COMMD7Q86VX2 200 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 RNF182Q8N6D2 247 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 RXFP4Q8TDU9 374 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 MRPL53Q96EL3 112 aaKnown RBP4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 LINC00052Q96N35 136 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 TCEAL7Q9BRU2 100 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 EIF5A2Q9GZV4 153 aaKnown RBP4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 SMDT1Q9H4I9 107 aa4.3□□□□□ -1.72
NIFKP3-201ENST00000417799 EPDR1Q9UM22 224 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms