RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 SMIM7Q9BQ49 75 aa6.21□□□□□ -1.42
TRIM48-201ENST00000417545 PARLQ9H300 379 aa6.21□□□□□ -1.42
TRIM48-201ENST00000417545 SMDT1Q9H4I9 107 aa6.21□□□□□ -1.42
TRIM48-201ENST00000417545 NAGKQ9UJ70 344 aa6.21□□□□□ -1.42
TRIM48-201ENST00000417545 ZFP30Q9Y2G7 519 aa6.21□□□□□ -1.42
TRIM48-201ENST00000417545 TRAV21A0A0B4J279 112 aa6.2□□□□□ -1.42
TRIM48-201ENST00000417545 A8MTW9 85 aa6.2□□□□□ -1.42
TRIM48-201ENST00000417545 ZNF727A8MUV8 499 aa6.2□□□□□ -1.42
TRIM48-201ENST00000417545 SPRY2O43597 315 aa6.2□□□□□ -1.42
TRIM48-201ENST00000417545 GCGP01275 180 aa6.2□□□□□ -1.42
TRIM48-201ENST00000417545 HTN1P15515 57 aa6.2□□□□□ -1.42
TRIM48-201ENST00000417545 CRISP2P16562 243 aa6.2□□□□□ -1.42
TRIM48-201ENST00000417545 BTN1A1Q13410 526 aa6.2□□□□□ -1.42
TRIM48-201ENST00000417545 GFI1BQ5VTD9 330 aa6.2□□□□□ -1.42
TRIM48-201ENST00000417545 PRR27Q6MZM9 219 aa6.2□□□□□ -1.42
TRIM48-201ENST00000417545 Q6ZWC4 215 aa6.2□□□□□ -1.42
TRIM48-201ENST00000417545 TMEM256Q8N2U0 113 aa6.2□□□□□ -1.42
TRIM48-201ENST00000417545 NHLRC2Q8NBF2 726 aa6.2□□□□□ -1.42
TRIM48-201ENST00000417545 C2CD4CQ8TF44 421 aa6.2□□□□□ -1.42
TRIM48-201ENST00000417545 DAZAP1Q96EP5 407 aaKnown RBP6.2□□□□□ -1.42
TRIM48-201ENST00000417545 C8orf49Q96NF6 230 aa6.2□□□□□ -1.42
TRIM48-201ENST00000417545 C20orf144Q9BQM9 153 aa6.2□□□□□ -1.42
TRIM48-201ENST00000417545 BIN3Q9NQY0 253 aa6.2□□□□□ -1.42
TRIM48-201ENST00000417545 MGAM2Q2M2H8 2515 aa6.19□□□□□ -1.42
TRIM48-201ENST00000417545 TRBV6-1A0A0K0K1D8 114 aa6.19□□□□□ -1.42
TRIM48-201ENST00000417545 CBY3A6NI87 242 aa6.19□□□□□ -1.42
TRIM48-201ENST00000417545 SRP19P09132 144 aaKnown RBP6.19□□□□□ -1.42
TRIM48-201ENST00000417545 SOHLH1Q5JUK2 328 aa6.19□□□□□ -1.42
TRIM48-201ENST00000417545 FAM159AQ6UWV7 190 aa6.19□□□□□ -1.42
TRIM48-201ENST00000417545 LINC00322Q6ZN03 302 aaPredicted RBP6.19□□□□□ -1.42
TRIM48-201ENST00000417545 SBSPONQ8IVN8 264 aa6.19□□□□□ -1.42
TRIM48-201ENST00000417545 OR11H2Q8NH07 326 aa6.19□□□□□ -1.42
TRIM48-201ENST00000417545 DERL1Q9BUN8 251 aa6.19□□□□□ -1.42
TRIM48-201ENST00000417545 RETNQ9HD89 108 aa6.19□□□□□ -1.42
TRIM48-201ENST00000417545 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.18□□□□□ -1.42
TRIM48-201ENST00000417545 KLLNB2CW77 178 aa6.18□□□□□ -1.42
TRIM48-201ENST00000417545 H7BYZ3 331 aa6.18□□□□□ -1.42
TRIM48-201ENST00000417545 NDUFS6O75380 124 aaKnown RBP6.18□□□□□ -1.42
TRIM48-201ENST00000417545 LTAP01374 205 aa6.18□□□□□ -1.42
TRIM48-201ENST00000417545 NHLRC4P0CG21 123 aaPredicted RBP6.18□□□□□ -1.42
TRIM48-201ENST00000417545 OR5I1Q13606 314 aa6.18□□□□□ -1.42
TRIM48-201ENST00000417545 RRN3P1Q2M238 152 aa6.18□□□□□ -1.42
TRIM48-201ENST00000417545 FAM74A3Q4VXF1 159 aa6.18□□□□□ -1.42
TRIM48-201ENST00000417545 UQCC3Q6UW78 93 aa6.18□□□□□ -1.42
TRIM48-201ENST00000417545 TMEM183AQ8IXX5 376 aa6.18□□□□□ -1.42
TRIM48-201ENST00000417545 ZFAND2AQ8N6M9 145 aa6.18□□□□□ -1.42
TRIM48-201ENST00000417545 RNF183Q96D59 192 aa6.18□□□□□ -1.42
TRIM48-201ENST00000417545 TP53TG1Q9Y2A0 90 aa6.18□□□□□ -1.42
TRIM48-201ENST00000417545 KLF12Q9Y4X4 402 aa6.18□□□□□ -1.42
TRIM48-201ENST00000417545 DNAH3Q8TD57 4116 aa6.18□□□□□ -1.42
TRIM48-201ENST00000417545 FABP5P3A8MUU1 101 aa6.17□□□□□ -1.42
TRIM48-201ENST00000417545 C9JCJ5 164 aa6.17□□□□□ -1.42
TRIM48-201ENST00000417545 IGLV2-11P01706 119 aa6.17□□□□□ -1.42
TRIM48-201ENST00000417545 PFN1P07737 140 aaKnown RBP6.17□□□□□ -1.42
TRIM48-201ENST00000417545 SFTA3P0C7M3 94 aa6.17□□□□□ -1.42
TRIM48-201ENST00000417545 SRSF3P84103 164 aaKnown RBP6.17□□□□□ -1.42
TRIM48-201ENST00000417545 KIR3DS1Q14943 382 aa6.17□□□□□ -1.42
TRIM48-201ENST00000417545 MUC21Q5SSG8 566 aa6.17□□□□□ -1.42
TRIM48-201ENST00000417545 FAM162BQ5T6X4 162 aa6.17□□□□□ -1.42
TRIM48-201ENST00000417545 SMIM12Q96EX1 92 aa6.17□□□□□ -1.42
TRIM48-201ENST00000417545 ZC2HC1AQ96GY0 325 aa6.17□□□□□ -1.42
TRIM48-201ENST00000417545 KCNS1Q96KK3 526 aa6.17□□□□□ -1.42
TRIM48-201ENST00000417545 FAM19A4Q96LR4 140 aa6.17□□□□□ -1.42
TRIM48-201ENST00000417545 PYGO2Q9BRQ0 406 aa6.17□□□□□ -1.42
TRIM48-201ENST00000417545 SDF2L1Q9HCN8 221 aa6.17□□□□□ -1.42
TRIM48-201ENST00000417545 TRGV11A0A075B6L2 103 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 IGHV1OR15-1A0A075B7D0 117 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 LINC00862A6NCI5 91 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 PGPEP1LA6NFU8 196 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 SMIM9A6NGZ8 99 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 SNURFLB1AK76 121 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 F8W036 122 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 CRXO43186 299 aaPredicted RBP6.16□□□□□ -1.42
TRIM48-201ENST00000417545 ORM1P02763 201 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 MIFP14174 115 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 S100A4P26447 101 aaKnown RBP6.16□□□□□ -1.42
TRIM48-201ENST00000417545 ADIRFQ15847 76 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 TMEM241Q24JQ0 296 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 PRR9Q5T870 116 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 Q6AWC8 147 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 EIF4E3Q8N5X7 224 aaKnown RBP6.16□□□□□ -1.42
TRIM48-201ENST00000417545 TVP23CQ96ET8 276 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 TM2D3Q9BRN9 247 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 KRTAP9-2Q9BYQ4 174 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 NAT8Q9UHE5 227 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 ZNF705GA8MUZ8 300 aaPredicted RBP6.16□□□□□ -1.42
TRIM48-201ENST00000417545 B4DEV8 164 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 M0R036 132 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 SH2D1AO60880 128 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 P01737 135 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 GIG44P09565 113 aaPredicted RBP6.16□□□□□ -1.42
TRIM48-201ENST00000417545 EMP1P54849 157 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 ZNF415Q09FC8 603 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 C1orf158Q8N1D5 194 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 C16orf74Q96GX8 76 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 OVOL2Q9BRP0 275 aa6.16□□□□□ -1.42
TRIM48-201ENST00000417545 NOTCH1P46531 2555 aa6.15□□□□□ -1.42
TRIM48-201ENST00000417545 TMSB15BA0A087X1C1 80 aa6.15□□□□□ -1.43
TRIM48-201ENST00000417545 XKRY2A2RUG3 117 aa6.15□□□□□ -1.43
TRIM48-201ENST00000417545 TMEM189A5PLL7 270 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms