RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 J3KT08 172 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 NPYP01303 97 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 SMCPP49901 116 aaPredicted RBP6.2□□□□□ -1.42
SIK3-203ENST00000415541 FHL3Q13643 280 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 TMEM78Q5T7P6 136 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 WFDC3Q8IUB2 231 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 MYOZ3Q8TDC0 251 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 TMEM190Q8WZ59 177 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 BOD1L1Q8NFC6 3051 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 ABCA2Q9BZC7 2435 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 A0A096LNJ9 63 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 IGHV3-21A0A0B4J1V1 117 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 A4D1N5 150 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 LINC01549A6NIU2 74 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 K7EMI3 77 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 IGHV3-48P01763 117 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 EMP1P54849 157 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 ANKRD29Q8N6D5 301 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 CENPEQ02224 2701 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 TRAV3A0A0B4J244 114 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 TCRAP04437 139 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 MYOD1P15172 320 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 DLX1P56177 255 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 CD69Q07108 199 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 LOXL1Q08397 574 aaPredicted RBP6.2□□□□□ -1.42
SIK3-203ENST00000415541 FAM104BQ5XKR9 115 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 LYPD2Q6UXB3 125 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 PRNTQ86SH4 94 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 AAMDCQ9H7C9 122 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 ZNRD1Q9P1U0 126 aa6.2□□□□□ -1.42
SIK3-203ENST00000415541 TRAV4A0A0B4J268 109 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 ZNF672Q499Z4 452 aaPredicted RBP6.19□□□□□ -1.42
SIK3-203ENST00000415541 C2orf83Q53S99 150 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 LRRC75A-AS1Q8N1F1 130 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 FXYD5Q96DB9 178 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 ZMAT4Q9H898 229 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 NXT2Q9NPJ8 142 aaKnown RBP6.19□□□□□ -1.42
SIK3-203ENST00000415541 IGHV3OR16-10A0A075B7F0 116 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 TRAV8-1A0A0A6YYK1 113 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 COL8A2P25067 703 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 LEPP41159 167 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 FXYD7P58549 80 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 MRPL23Q16540 153 aaKnown RBP6.19□□□□□ -1.42
SIK3-203ENST00000415541 LINC00322Q6ZN03 302 aaPredicted RBP6.19□□□□□ -1.42
SIK3-203ENST00000415541 C10orf126Q8N4M7 172 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 HHLA3Q9XRX5 114 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 TMEM178BH3BS89 294 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 ZNF493Q6ZR52 646 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 LINC00305Q7Z4B0 112 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 C11orf53Q8IXP5 236 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 C15orf53Q8NAA6 179 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 OR1L8Q8NGR8 309 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 TMEM14BQ9NUH8 114 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 MDFICQ9P1T7 246 aa6.19□□□□□ -1.42
SIK3-203ENST00000415541 TRAV2A0A0B4J234 112 aa6.18□□□□□ -1.42
SIK3-203ENST00000415541 TMEM213A2RRL7 107 aa6.18□□□□□ -1.42
SIK3-203ENST00000415541 PLNP26678 52 aa6.18□□□□□ -1.42
SIK3-203ENST00000415541 SCGB1D4Q6XE38 83 aa6.18□□□□□ -1.42
SIK3-203ENST00000415541 OR11H6Q8NGC7 330 aa6.18□□□□□ -1.42
SIK3-203ENST00000415541 ABCA12Q86UK0 2595 aa6.18□□□□□ -1.42
SIK3-203ENST00000415541 SAA2P0DJI9 122 aaPredicted RBP6.18□□□□□ -1.42
SIK3-203ENST00000415541 MFAP4P55083 255 aa6.18□□□□□ -1.42
SIK3-203ENST00000415541 PRCDQ00LT1 54 aa6.18□□□□□ -1.42
SIK3-203ENST00000415541 HCP5Q6MZN7 132 aa6.18□□□□□ -1.42
SIK3-203ENST00000415541 NUP37Q8NFH4 326 aa6.18□□□□□ -1.42
SIK3-203ENST00000415541 U3KQK5 164 aa6.18□□□□□ -1.42
SIK3-203ENST00000415541 TRBV7-3A0A075B6L6 115 aa6.18□□□□□ -1.42
SIK3-203ENST00000415541 C9orf153Q5TBE3 101 aa6.18□□□□□ -1.42
SIK3-203ENST00000415541 MORN3Q6PF18 240 aaPredicted RBP6.18□□□□□ -1.42
SIK3-203ENST00000415541 Q86TA4 180 aa6.18□□□□□ -1.42
SIK3-203ENST00000415541 Q9H3A6 140 aa6.18□□□□□ -1.42
SIK3-203ENST00000415541 FRYQ5TBA9 3013 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 SLC25A20O43772 301 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 TGFAP01135 160 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 MYCNOSP40205 109 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 MRPL20Q9BYC9 149 aaKnown RBP6.17□□□□□ -1.42
SIK3-203ENST00000415541 SIGLEC9Q9Y336 463 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 SPENQ96T58 3664 aaKnown RBP6.17□□□□□ -1.42
SIK3-203ENST00000415541 IGLV3-9A0A075B6K5 115 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 TRAV40A0A0B4J280 105 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 PRB1P04280 392 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 SFTA2Q6UW10 78 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 GAFA1Q96PS6 74 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 OTORQ9NRC9 128 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 PLXNB1O43157 2135 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 DMXL1Q9Y485 3027 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 IGKV1OR2-108A0A075B7D4 117 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 WI2-2373I1.2A0A1W2PRP0 233 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 C9JAW5 83 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 ORM2P19652 201 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 TMEM200BQ69YZ2 307 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 SBSPONQ8IVN8 264 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 AMN1Q8IY45 258 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 AJUBAQ96IF1 538 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 RITA1Q96K30 269 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 HIGD1AQ9Y241 93 aa6.17□□□□□ -1.42
SIK3-203ENST00000415541 TNRC6BQ9UPQ9 1833 aaKnown RBP6.17□□□□□ -1.42
SIK3-203ENST00000415541 MRPL51Q4U2R6 128 aaKnown RBP6.16□□□□□ -1.42
SIK3-203ENST00000415541 MORN5Q5VZ52 161 aa6.16□□□□□ -1.42
SIK3-203ENST00000415541 TRGV9Q99603 122 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms