RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 IGKV4-1P06312 121 aa14.73□□□□□ -0.05
SHANK3-202ENST00000414786 CRYGSP22914 178 aa14.72□□□□□ -0.05
SHANK3-202ENST00000414786 DEFB135Q30KP9 77 aa14.72□□□□□ -0.05
SHANK3-202ENST00000414786 IGHG2P01859 326 aa14.71□□□□□ -0.05
SHANK3-202ENST00000414786 GATA3P23771 443 aa14.71□□□□□ -0.05
SHANK3-202ENST00000414786 LINC00114Q6XXX2 140 aa14.71□□□□□ -0.05
SHANK3-202ENST00000414786 A0A0G2JRQ6 117 aa14.71□□□□□ -0.05
SHANK3-202ENST00000414786 IGLV3-12A0A075B6K2 115 aa14.71□□□□□ -0.05
SHANK3-202ENST00000414786 NDUFB1O75438 58 aa14.71□□□□□ -0.06
SHANK3-202ENST00000414786 FOXE3Q13461 319 aa14.71□□□□□ -0.06
SHANK3-202ENST00000414786 MRPL51Q4U2R6 128 aaKnown RBP14.71□□□□□ -0.06
SHANK3-202ENST00000414786 C9orf66Q5T8R8 295 aa14.71□□□□□ -0.06
SHANK3-202ENST00000414786 Q6P435 159 aa14.71□□□□□ -0.06
SHANK3-202ENST00000414786 GAGE12HA6NDE8 117 aa14.7□□□□□ -0.06
SHANK3-202ENST00000414786 LY6G6FQ5SQ64 297 aa14.7□□□□□ -0.06
SHANK3-202ENST00000414786 ICOSQ9Y6W8 199 aa14.7□□□□□ -0.06
SHANK3-202ENST00000414786 FAM231BA6NCW3 169 aa14.7□□□□□ -0.06
SHANK3-202ENST00000414786 C15orf62A8K5M9 175 aa14.7□□□□□ -0.06
SHANK3-202ENST00000414786 PCNX1Q96RV3 2341 aa14.7□□□□□ -0.06
SHANK3-202ENST00000414786 HOXB4P17483 251 aaPredicted RBP14.7□□□□□ -0.06
SHANK3-202ENST00000414786 NYNRINQ9P2P1 1898 aaKnown RBP14.69□□□□□ -0.06
SHANK3-202ENST00000414786 Q9H8V8 135 aa14.69□□□□□ -0.06
SHANK3-202ENST00000414786 SPTAN1Q13813 2472 aaKnown RBP14.69□□□□□ -0.06
SHANK3-202ENST00000414786 LYPD6BQ8NI32 183 aa14.69□□□□□ -0.06
SHANK3-202ENST00000414786 TRPM3Q9HCF6 1732 aaPredicted RBP14.69□□□□□ -0.06
SHANK3-202ENST00000414786 A0A1B0GW64 132 aa14.69□□□□□ -0.06
SHANK3-202ENST00000414786 ELANEP08246 267 aa14.69□□□□□ -0.06
SHANK3-202ENST00000414786 CYYR1Q96J86 154 aa14.69□□□□□ -0.06
SHANK3-202ENST00000414786 ZNF134P52741 427 aa14.69□□□□□ -0.06
SHANK3-202ENST00000414786 TMEM141Q96I45 108 aa14.69□□□□□ -0.06
SHANK3-202ENST00000414786 IGKV3D-7A0A0C4DH55 119 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 RHOHQ15669 191 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 DAND5Q8N907 189 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 KLF2Q9Y5W3 355 aaPredicted RBP14.68□□□□□ -0.06
SHANK3-202ENST00000414786 BTCP35070 178 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 Q6ZS92 163 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 RNF5Q99942 180 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 C17orf77Q96MU5 243 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 TMEM14BQ9NUH8 114 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 TRAV13-2A0A0B4J235 113 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 A0A0J9YWU9 116 aa14.67□□□□□ -0.06
SHANK3-202ENST00000414786 TEX22C9J3V5 150 aa14.67□□□□□ -0.06
SHANK3-202ENST00000414786 KLK5Q9Y337 293 aaPredicted RBP14.67□□□□□ -0.06
SHANK3-202ENST00000414786 HIST2H2BCQ6DN03 193 aa14.67□□□□□ -0.06
SHANK3-202ENST00000414786 GFI1Q99684 422 aa14.67□□□□□ -0.06
SHANK3-202ENST00000414786 SCN4AP35499 1836 aa14.67□□□□□ -0.06
SHANK3-202ENST00000414786 IGLV3-19P01714 112 aa14.67□□□□□ -0.06
SHANK3-202ENST00000414786 M0R2N4 97 aa14.67□□□□□ -0.06
SHANK3-202ENST00000414786 FUSP35637 526 aaKnown RBP eCLIP14.67□□□□□ -0.062e-6■■■□□ 15.1
SHANK3-202ENST00000414786 RETNQ9HD89 108 aa14.67□□□□□ -0.06
SHANK3-202ENST00000414786 IGKV1-6A0A0C4DH72 117 aa14.66□□□□□ -0.06
SHANK3-202ENST00000414786 IGHV4-38-2P0DP08 117 aa14.66□□□□□ -0.06
SHANK3-202ENST00000414786 HIST2H2BDQ6DRA6 164 aa14.66□□□□□ -0.06
SHANK3-202ENST00000414786 MRPL53Q96EL3 112 aaKnown RBP14.66□□□□□ -0.06
SHANK3-202ENST00000414786 NDUFS6O75380 124 aaKnown RBP14.66□□□□□ -0.06
SHANK3-202ENST00000414786 HERVK_113P63121 156 aa14.66□□□□□ -0.06
SHANK3-202ENST00000414786 XIRP1Q702N8 1843 aaKnown RBP14.66□□□□□ -0.06
SHANK3-202ENST00000414786 DLEU1O43261 78 aa14.66□□□□□ -0.06
SHANK3-202ENST00000414786 CASC2Q6XLA1 102 aa14.66□□□□□ -0.06
SHANK3-202ENST00000414786 FGF16O43320 207 aa14.65□□□□□ -0.06
SHANK3-202ENST00000414786 TNCP24821 2201 aa14.65□□□□□ -0.06
SHANK3-202ENST00000414786 IGHV7-4-1A0A0J9YVY3 117 aa14.65□□□□□ -0.06
SHANK3-202ENST00000414786 SPART-AS1P0CW21 52 aa14.65□□□□□ -0.06
SHANK3-202ENST00000414786 ADAMTS7Q9UKP4 1686 aa14.64□□□□□ -0.07
SHANK3-202ENST00000414786 BAALC-AS2P0C853 105 aa14.64□□□□□ -0.07
SHANK3-202ENST00000414786 FLVCR1-AS1Q8TAF5 88 aa14.64□□□□□ -0.07
SHANK3-202ENST00000414786 ARHGAP21Q5T5U3 1957 aa14.64□□□□□ -0.07
SHANK3-202ENST00000414786 DEFB113Q30KQ7 82 aa14.64□□□□□ -0.07
SHANK3-202ENST00000414786 NDUFA4O00483 81 aa14.64□□□□□ -0.07
SHANK3-202ENST00000414786 ORMDL1Q9P0S3 153 aa14.64□□□□□ -0.07
SHANK3-202ENST00000414786 IFITM1P13164 125 aa14.63□□□□□ -0.07
SHANK3-202ENST00000414786 HRCT1Q6UXD1 115 aa14.63□□□□□ -0.07
SHANK3-202ENST00000414786 MRPL35Q9NZE8 188 aaKnown RBP14.63□□□□□ -0.07
SHANK3-202ENST00000414786 Q8N8P6 123 aa14.63□□□□□ -0.07
SHANK3-202ENST00000414786 COL4A5P29400 1685 aa14.63□□□□□ -0.07
SHANK3-202ENST00000414786 EML6Q6ZMW3 1958 aa14.63□□□□□ -0.07
SHANK3-202ENST00000414786 LYPD1Q8N2G4 141 aa14.63□□□□□ -0.07
SHANK3-202ENST00000414786 FBLN5Q9UBX5 448 aa14.63□□□□□ -0.07
SHANK3-202ENST00000414786 UBE2V1Q13404 147 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 HIGD2BQ4VC39 106 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 ETV2O00321 342 aaPredicted RBP14.62□□□□□ -0.07
SHANK3-202ENST00000414786 IFI6P09912 130 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 C1orf194Q5T5A4 169 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 RBBP6Q7Z6E9 1792 aaKnown RBP14.62□□□□□ -0.07
SHANK3-202ENST00000414786 PARP14Q460N5 1801 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 IGHV4-30-2A0A087WSY4 118 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 ANKRD29Q8N6D5 301 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 VSIG2Q96IQ7 327 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 TRBV20-1A0A075B6N2 111 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 IGLV3-9A0A075B6K5 115 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 Q6ZRM9 215 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 ACACAQ13085 2346 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 ARID2Q68CP9 1835 aa14.61□□□□□ -0.07
SHANK3-202ENST00000414786 DYNAPQ8N1N2 210 aa14.61□□□□□ -0.07
SHANK3-202ENST00000414786 KLK12Q9UKR0 248 aa14.61□□□□□ -0.07
SHANK3-202ENST00000414786 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.61□□□□□ -0.07
SHANK3-202ENST00000414786 MRPL27Q9P0M9 148 aaKnown RBP14.61□□□□□ -0.07
SHANK3-202ENST00000414786 H3BMG7 143 aa14.61□□□□□ -0.07
SHANK3-202ENST00000414786 PRSS33Q8NF86 280 aa14.61□□□□□ -0.07
SHANK3-202ENST00000414786 ATP6V0E2Q8NHE4 81 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms