RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 PPP1R1AQ13522 171 aa3.68□□□□□ -1.82
NOD1-203ENST00000413433 TMEM241Q24JQ0 296 aa3.68□□□□□ -1.82
NOD1-203ENST00000413433 ASB13Q8WXK3 278 aa3.68□□□□□ -1.82
NOD1-203ENST00000413433 USMG5Q96IX5 58 aa3.68□□□□□ -1.82
NOD1-203ENST00000413433 CMSS1Q9BQ75 279 aaKnown RBP3.68□□□□□ -1.82
NOD1-203ENST00000413433 PECRQ9BY49 303 aa3.68□□□□□ -1.82
NOD1-203ENST00000413433 OR2D2Q9H210 308 aa3.68□□□□□ -1.82
NOD1-203ENST00000413433 SND1-IT1Q9HBX3 110 aa3.68□□□□□ -1.82
NOD1-203ENST00000413433 RBM7Q9Y580 266 aaKnown RBP3.68□□□□□ -1.82
NOD1-203ENST00000413433 AGRNO00468 2067 aa3.67□□□□□ -1.82
NOD1-203ENST00000413433 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.67□□□□□ -1.82
NOD1-203ENST00000413433 C2orf70A6NJV1 201 aa3.67□□□□□ -1.82
NOD1-203ENST00000413433 E7EUB6 86 aa3.67□□□□□ -1.82
NOD1-203ENST00000413433 CRYZL1O95825 349 aa3.67□□□□□ -1.82
NOD1-203ENST00000413433 LINC00614P0C842 121 aa3.67□□□□□ -1.82
NOD1-203ENST00000413433 UBBP0CG47 229 aa3.67□□□□□ -1.82
NOD1-203ENST00000413433 CBLN1P23435 193 aa3.67□□□□□ -1.82
NOD1-203ENST00000413433 RAB14P61106 215 aa3.67□□□□□ -1.82
NOD1-203ENST00000413433 HSD17B12Q53GQ0 312 aa3.67□□□□□ -1.82
NOD1-203ENST00000413433 CENPWQ5EE01 88 aa3.67□□□□□ -1.82
NOD1-203ENST00000413433 AKAP14Q86UN6 197 aa3.67□□□□□ -1.82
NOD1-203ENST00000413433 OR10J5Q8NHC4 309 aa3.67□□□□□ -1.82
NOD1-203ENST00000413433 Q9H521 79 aa3.67□□□□□ -1.82
NOD1-203ENST00000413433 VSIRQ9H7M9 311 aa3.67□□□□□ -1.82
NOD1-203ENST00000413433 ZNF430Q9H8G1 570 aaPredicted RBP3.67□□□□□ -1.82
NOD1-203ENST00000413433 IGLV4-69A0A075B6H9 119 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 TRBV6-7A0A0A0MS04 114 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 LOC105371267A0A1B0GV96 52 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 KLLNB2CW77 178 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 FAM25AB3EWG3 89 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 FAM25CB3EWG5 89 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 FAM25GB3EWG6 89 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 DENRO43583 198 aaKnown RBP3.66□□□□□ -1.82
NOD1-203ENST00000413433 GGCTO75223 188 aaKnown RBP3.66□□□□□ -1.82
NOD1-203ENST00000413433 REG1AP05451 166 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 UCHL1P09936 223 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 SAA1P0DJI8 122 aaPredicted RBP3.66□□□□□ -1.82
NOD1-203ENST00000413433 RPL12P30050 165 aaKnown RBP3.66□□□□□ -1.82
NOD1-203ENST00000413433 SULT1A2P50226 295 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 MP68P56378 58 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 GNG2P59768 71 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 RAB2AP61019 212 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 RPS25P62851 125 aaKnown RBP3.66□□□□□ -1.82
NOD1-203ENST00000413433 RPL30P62888 115 aaKnown RBP3.66□□□□□ -1.82
NOD1-203ENST00000413433 TNFRSF9Q07011 255 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 BTN1A1Q13410 526 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 PLECQ15149 4684 aaKnown RBP3.66□□□□□ -1.82
NOD1-203ENST00000413433 RTL8BQ17RB0 113 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 VMA21Q3ZAQ7 101 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 TMEM91Q6ZNR0 172 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 C8orf59Q8N0T1 100 aaPredicted RBP3.66□□□□□ -1.82
NOD1-203ENST00000413433 TTC9CQ8N5M4 171 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.66□□□□□ -1.82
NOD1-203ENST00000413433 OR2K2Q8NGT1 345 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 CIRBP-AS1Q8TBR5 109 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 SLC25A46Q96AG3 418 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 GPR82Q96P67 336 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 GINS4Q9BRT9 223 aa3.66□□□□□ -1.82
NOD1-203ENST00000413433 RSL24D1Q9UHA3 163 aaKnown RBP3.66□□□□□ -1.82
NOD1-203ENST00000413433 ALMS1Q8TCU4 4167 aa3.65□□□□□ -1.82
NOD1-203ENST00000413433 IGHV3OR16-8A0A075B7F1 116 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 A0A1B0GW64 132 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 FAM223BA6NKX1 122 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 PANO1I0J062 215 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 CTXN2P0C2S0 81 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 NFYAP23511 347 aaPredicted RBP3.65□□□□□ -1.83
NOD1-203ENST00000413433 CRHBPP24387 322 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 CMC4P56277 68 aaPredicted RBP3.65□□□□□ -1.83
NOD1-203ENST00000413433 TCL1AP56279 114 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 CDK10Q15131 360 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 DEFB135Q30KP9 77 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 UNQ9165/PRO28630Q6UXU0 137 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 LINC00299Q6ZSB3 139 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 LYG2Q86SG7 212 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 COMMD7Q86VX2 200 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 FAM223AQ8IWN6 122 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.65□□□□□ -1.83
NOD1-203ENST00000413433 BORCS5Q969J3 196 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 SPIN2AQ99865 258 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 SPIN2BQ9BPZ2 258 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 MND1Q9BWT6 205 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 SLC2A9Q9NRM0 540 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 LSM2Q9Y333 95 aaKnown RBP3.65□□□□□ -1.83
NOD1-203ENST00000413433 ALG5Q9Y673 324 aa3.65□□□□□ -1.83
NOD1-203ENST00000413433 TNCP24821 2201 aa3.64□□□□□ -1.83
NOD1-203ENST00000413433 FRAS1Q86XX4 4008 aa3.64□□□□□ -1.83
NOD1-203ENST00000413433 IGHV3-21A0A0B4J1V1 117 aa3.64□□□□□ -1.83
NOD1-203ENST00000413433 TRAV3A0A0B4J244 114 aa3.64□□□□□ -1.83
NOD1-203ENST00000413433 DEFB4AO15263 64 aa3.64□□□□□ -1.83
NOD1-203ENST00000413433 ZNF207O43670 478 aaKnown RBP3.64□□□□□ -1.83
NOD1-203ENST00000413433 S1PR2O95136 353 aa3.64□□□□□ -1.83
NOD1-203ENST00000413433 IGKV1-39P01597 117 aa3.64□□□□□ -1.83
NOD1-203ENST00000413433 IGKV1D-39P04432 117 aa3.64□□□□□ -1.83
NOD1-203ENST00000413433 PTHLHP12272 177 aa3.64□□□□□ -1.83
NOD1-203ENST00000413433 DEFA4P12838 97 aa3.64□□□□□ -1.83
NOD1-203ENST00000413433 GADD45AP24522 165 aa3.64□□□□□ -1.83
NOD1-203ENST00000413433 MAP2K4P45985 399 aa3.64□□□□□ -1.83
NOD1-203ENST00000413433 RPL5P46777 297 aaKnown RBP3.64□□□□□ -1.83
NOD1-203ENST00000413433 SERPINB10P48595 397 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms