RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 PSMB8P28062 276 aa12.97□□□□□ -0.33
PTPRC-206ENST00000413409 RAB4BP61018 213 aa12.97□□□□□ -0.33
PTPRC-206ENST00000413409 HBBP68871 147 aa12.97□□□□□ -0.33
PTPRC-206ENST00000413409 S100A12P80511 92 aa12.97□□□□□ -0.33
PTPRC-206ENST00000413409 LCN12Q6JVE5 192 aa12.97□□□□□ -0.33
PTPRC-206ENST00000413409 TCF24Q7RTU0 167 aa12.97□□□□□ -0.33
PTPRC-206ENST00000413409 GTSF1Q8WW33 167 aa12.97□□□□□ -0.33
PTPRC-206ENST00000413409 NPFFR1Q9GZQ6 430 aa12.97□□□□□ -0.33
PTPRC-206ENST00000413409 A0A1W2PS18 150 aa12.96□□□□□ -0.33
PTPRC-206ENST00000413409 PYY3Q5JQD4 70 aa12.96□□□□□ -0.33
PTPRC-206ENST00000413409 OR10J3Q5JRS4 329 aa12.96□□□□□ -0.33
PTPRC-206ENST00000413409 C8orf86Q6ZUL3 223 aa12.96□□□□□ -0.33
PTPRC-206ENST00000413409 WFDC9Q8NEX5 89 aa12.96□□□□□ -0.33
PTPRC-206ENST00000413409 PRR25Q96S07 402 aa12.96□□□□□ -0.33
PTPRC-206ENST00000413409 NDFIP1Q9BT67 221 aa12.96□□□□□ -0.33
PTPRC-206ENST00000413409 TRAV8-2A0A0B4J237 113 aa12.95□□□□□ -0.34
PTPRC-206ENST00000413409 ZNF207O43670 478 aaKnown RBP12.95□□□□□ -0.34
PTPRC-206ENST00000413409 HLA-DMBP28068 263 aa12.95□□□□□ -0.34
PTPRC-206ENST00000413409 FAM162BQ5T6X4 162 aa12.95□□□□□ -0.34
PTPRC-206ENST00000413409 C8orf49Q96NF6 230 aa12.95□□□□□ -0.34
PTPRC-206ENST00000413409 IGHV3-66A0A0C4DH42 116 aa12.94□□□□□ -0.34
PTPRC-206ENST00000413409 A0A1B0GW15 77 aa12.94□□□□□ -0.34
PTPRC-206ENST00000413409 GRIFINA4D1Z8 144 aa12.94□□□□□ -0.34
PTPRC-206ENST00000413409 IGHV3-11P01762 117 aa12.94□□□□□ -0.34
PTPRC-206ENST00000413409 CD28P10747 220 aa12.94□□□□□ -0.34
PTPRC-206ENST00000413409 CRIP1P50238 77 aa12.94□□□□□ -0.34
PTPRC-206ENST00000413409 TMEM95Q3KNT9 176 aa12.94□□□□□ -0.34
PTPRC-206ENST00000413409 GDF5OSQ5U4N7 250 aa12.94□□□□□ -0.34
PTPRC-206ENST00000413409 UNQ9165/PRO28630Q6UXU0 137 aa12.94□□□□□ -0.34
PTPRC-206ENST00000413409 ZNF702PQ9H963 129 aa12.94□□□□□ -0.34
PTPRC-206ENST00000413409 PEF1Q9UBV8 284 aaKnown RBP12.94□□□□□ -0.34
PTPRC-206ENST00000413409 TP53TG3Q9ULZ0 132 aa12.94□□□□□ -0.34
PTPRC-206ENST00000413409 K7EMT4 169 aa12.93□□□□□ -0.34
PTPRC-206ENST00000413409 SH2D1AO60880 128 aa12.93□□□□□ -0.34
PTPRC-206ENST00000413409 BMI1P35226 326 aa12.93□□□□□ -0.34
PTPRC-206ENST00000413409 RPS20P60866 119 aaKnown RBP12.93□□□□□ -0.34
PTPRC-206ENST00000413409 SLAQ13239 276 aa12.93□□□□□ -0.34
PTPRC-206ENST00000413409 FOXE3Q13461 319 aa12.93□□□□□ -0.34
PTPRC-206ENST00000413409 GATD1Q8NB37 220 aa12.93□□□□□ -0.34
PTPRC-206ENST00000413409 MYOZ3Q8TDC0 251 aa12.93□□□□□ -0.34
PTPRC-206ENST00000413409 PGLYRP4Q96LB8 373 aa12.93□□□□□ -0.34
PTPRC-206ENST00000413409 VGLL1Q99990 258 aa12.93□□□□□ -0.34
PTPRC-206ENST00000413409 NIT2Q9NQR4 276 aa12.93□□□□□ -0.34
PTPRC-206ENST00000413409 U3KQK5 164 aa12.93□□□□□ -0.34
PTPRC-206ENST00000413409 ELANEP08246 267 aa12.92□□□□□ -0.34
PTPRC-206ENST00000413409 SRIP30626 198 aa12.92□□□□□ -0.34
PTPRC-206ENST00000413409 LINC00310P59036 64 aa12.92□□□□□ -0.34
PTPRC-206ENST00000413409 PAFAH1B2P68402 229 aa12.92□□□□□ -0.34
PTPRC-206ENST00000413409 CASC10Q5T4H9 136 aa12.92□□□□□ -0.34
PTPRC-206ENST00000413409 TMEM256Q8N2U0 113 aa12.92□□□□□ -0.34
PTPRC-206ENST00000413409 PPP1R14DQ9NXH3 145 aa12.92□□□□□ -0.34
PTPRC-206ENST00000413409 CSMD3Q7Z407 3707 aa12.92□□□□□ -0.34
PTPRC-206ENST00000413409 IGHV3OR16-13A0A075B7E8 117 aa12.91□□□□□ -0.34
PTPRC-206ENST00000413409 IGHV3-49A0A0A0MS15 119 aa12.91□□□□□ -0.34
PTPRC-206ENST00000413409 IGHV3-74A0A0B4J1X5 117 aa12.91□□□□□ -0.34
PTPRC-206ENST00000413409 IGHV7-4-1A0A0J9YVY3 117 aa12.91□□□□□ -0.34
PTPRC-206ENST00000413409 ZNF705FA8MVS1 300 aaPredicted RBP12.91□□□□□ -0.34
PTPRC-206ENST00000413409 A8MWP6 167 aa12.91□□□□□ -0.34
PTPRC-206ENST00000413409 CD33P20138 364 aa12.91□□□□□ -0.34
PTPRC-206ENST00000413409 KLF5Q13887 457 aaPredicted RBP12.91□□□□□ -0.34
PTPRC-206ENST00000413409 JOSD1Q15040 202 aaPredicted RBP12.91□□□□□ -0.34
PTPRC-206ENST00000413409 IGFL4Q6B9Z1 124 aa12.91□□□□□ -0.34
PTPRC-206ENST00000413409 BAGE3Q86Y29 109 aa12.91□□□□□ -0.34
PTPRC-206ENST00000413409 GPHB5Q86YW7 130 aa12.91□□□□□ -0.34
PTPRC-206ENST00000413409 Q8N2B8 174 aa12.91□□□□□ -0.34
PTPRC-206ENST00000413409 RNF152Q8N8N0 203 aa12.91□□□□□ -0.34
PTPRC-206ENST00000413409 Q8TAT8 98 aa12.91□□□□□ -0.34
PTPRC-206ENST00000413409 DAZ1Q9NQZ3 744 aaKnown RBP12.91□□□□□ -0.34
PTPRC-206ENST00000413409 HERC2O95714 4834 aa12.91□□□□□ -0.34
PTPRC-206ENST00000413409 HUWE1Q7Z6Z7 4374 aaKnown RBP12.91□□□□□ -0.34
PTPRC-206ENST00000413409 A0A1B0GUT8 65 aa12.9□□□□□ -0.34
PTPRC-206ENST00000413409 TMEM189A5PLL7 270 aa12.9□□□□□ -0.34
PTPRC-206ENST00000413409 PRAC2D3DTV9 90 aa12.9□□□□□ -0.34
PTPRC-206ENST00000413409 SOCS3O14543 225 aa12.9□□□□□ -0.34
PTPRC-206ENST00000413409 SERF1AO75920 110 aa12.9□□□□□ -0.34
PTPRC-206ENST00000413409 RIGQ13278 110 aa12.9□□□□□ -0.34
PTPRC-206ENST00000413409 FAM106AQ4KMX7 169 aa12.9□□□□□ -0.34
PTPRC-206ENST00000413409 SAMD13Q5VXD3 122 aa12.9□□□□□ -0.34
PTPRC-206ENST00000413409 C9orf47Q6ZRZ4 202 aa12.9□□□□□ -0.34
PTPRC-206ENST00000413409 LCNL1Q6ZST4 164 aa12.9□□□□□ -0.34
PTPRC-206ENST00000413409 NDUFA11Q86Y39 141 aa12.9□□□□□ -0.34
PTPRC-206ENST00000413409 RNF182Q8N6D2 247 aa12.9□□□□□ -0.34
PTPRC-206ENST00000413409 C16orf92Q96LL3 132 aa12.9□□□□□ -0.34
PTPRC-206ENST00000413409 ASCL2Q99929 193 aa12.9□□□□□ -0.34
PTPRC-206ENST00000413409 CITED2Q99967 270 aaPredicted RBP12.9□□□□□ -0.34
PTPRC-206ENST00000413409 STARD9Q9P2P6 4700 aa12.89□□□□□ -0.35
PTPRC-206ENST00000413409 LCE6AA0A183 80 aa12.89□□□□□ -0.35
PTPRC-206ENST00000413409 GZMBP10144 247 aa12.89□□□□□ -0.35
PTPRC-206ENST00000413409 CAMPP49913 170 aa12.89□□□□□ -0.35
PTPRC-206ENST00000413409 KIAA1644Q3SXP7 199 aa12.89□□□□□ -0.35
PTPRC-206ENST00000413409 BORCS7Q96B45 105 aa12.89□□□□□ -0.35
PTPRC-206ENST00000413409 UFC1Q9Y3C8 167 aa12.89□□□□□ -0.35
PTPRC-206ENST00000413409 LENEPQ9Y5L5 61 aa12.89□□□□□ -0.35
PTPRC-206ENST00000413409 LGALS1P09382 135 aaKnown RBP12.88□□□□□ -0.35
PTPRC-206ENST00000413409 ZNF138P52744 262 aa12.88□□□□□ -0.35
PTPRC-206ENST00000413409 TMEM78Q5T7P6 136 aa12.88□□□□□ -0.35
PTPRC-206ENST00000413409 KCNS1Q96KK3 526 aa12.88□□□□□ -0.35
PTPRC-206ENST00000413409 SMPXQ9UHP9 88 aa12.88□□□□□ -0.35
PTPRC-206ENST00000413409 NUPR1O60356 82 aa12.88□□□□□ -0.35
PTPRC-206ENST00000413409 HOXD3P31249 432 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms