RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 FAM236BA0A1B0GV22 79 aa1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 OR2T8A6NH00 312 aa1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 M0R233 179 aa1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 UQCRQO14949 82 aa1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 SLC25A5P05141 298 aaKnown RBP1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 TMEM91Q6ZNR0 172 aa1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 CCL4L1Q8NHW4 92 aa1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 C4orf3Q8WVX3 66 aa1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 SDF2Q99470 211 aa1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 GNG8Q9UK08 70 aa1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 CUL7Q14999 1698 aa1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 KIDINS220Q9ULH0 1771 aa1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 KIAA1549Q9HCM3 1950 aa1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 TNRC6BQ9UPQ9 1833 aaKnown RBP1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 WDR97A6NE52 1622 aa1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 C17orf112F2Z3M2 114 aa1.65□□□□□ -2.15
HMGB3P31-201ENST00000413333 F6UZH7 168 aa1.65□□□□□ -2.15
HMGB3P31-201ENST00000413333 CORTO00230 105 aa1.65□□□□□ -2.15
HMGB3P31-201ENST00000413333 GEMIN2O14893 280 aaKnown RBP1.65□□□□□ -2.15
HMGB3P31-201ENST00000413333 MT-ND6P03923 174 aa1.65□□□□□ -2.15
HMGB3P31-201ENST00000413333 APODP05090 189 aa1.65□□□□□ -2.15
HMGB3P31-201ENST00000413333 CCL4P13236 92 aa1.65□□□□□ -2.15
HMGB3P31-201ENST00000413333 CCSMST1Q4G0I0 132 aa1.65□□□□□ -2.15
HMGB3P31-201ENST00000413333 TEN1Q86WV5 123 aa1.65□□□□□ -2.15
HMGB3P31-201ENST00000413333 FAM216BQ8N7L0 139 aa1.65□□□□□ -2.15
HMGB3P31-201ENST00000413333 OR4B1Q8NGF8 309 aa1.65□□□□□ -2.15
HMGB3P31-201ENST00000413333 TMEM191AQ9H0A3 160 aa1.65□□□□□ -2.15
HMGB3P31-201ENST00000413333 ALPK3Q96L96 1907 aa1.65□□□□□ -2.15
HMGB3P31-201ENST00000413333 USP54Q70EL1 1684 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 ADGRB1O14514 1584 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 IGKV2D-26A0A0A0MRZ7 120 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 TRBV6-7A0A0A0MS04 114 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 TRAV10A0A0B4J240 114 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 LOC100130705A0A1B0GUX0 176 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 IGLV1-51P01701 117 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 HBDP02042 147 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 HLA-DRB4P13762 266 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 RBP2P50120 134 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 CDK6Q00534 326 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 PLGLB1Q02325 96 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 KRTAP21-3Q3LHN1 58 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 C1orf134Q5TEV5 83 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 C2orf82Q6UX34 121 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 RAB37Q96AX2 223 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 CHCHD2Q9Y6H1 151 aaPredicted RBP1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 HLA-DRB4X5D2U9 266 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 PLXNA4Q9HCM2 1894 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 QRICH2Q9H0J4 1663 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 AKAP11Q9UKA4 1901 aa1.64□□□□□ -2.15
HMGB3P31-201ENST00000413333 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 ANGP03950 147 aaKnown RBP1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 FABP4P15090 132 aa1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 FGF7P21781 194 aa1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 DSCR4P56555 118 aaPredicted RBP1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 SNRPD3P62318 126 aaKnown RBP1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 MRPS10P82664 201 aaKnown RBP1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 MRPS36P82909 103 aaKnown RBP1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 FAM74A1Q5RGS3 127 aa1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 C3orf62Q6ZUJ4 267 aa1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 MUCL1Q96DR8 90 aa1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 PSMG3Q9BT73 122 aaPredicted RBP1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 PDCD10Q9BUL8 212 aa1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 COMMD3Q9UBI1 195 aa1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 DNAJC15Q9Y5T4 150 aa1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 HELZP42694 1942 aaKnown RBP1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 RP1L1Q8IWN7 2480 aaPredicted RBP1.63□□□□□ -2.15
HMGB3P31-201ENST00000413333 SPAARA0A1B0GVQ0 90 aa1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 ERC2-IT1O76042 136 aa1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 S100A8P05109 93 aa1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 SAA1P0DJI8 122 aaPredicted RBP1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 TPT1P13693 172 aaKnown RBP1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 HIST1H1BP16401 226 aaKnown RBP1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 GUCA1AP43080 201 aaPredicted RBP1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 BTG2P78543 158 aa1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 SCIMPQ6UWF3 145 aa1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 IZUMO2Q6UXV1 221 aa1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 TCTEX1D1Q8N7M0 179 aa1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 Q8N814 137 aa1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 PP6455Q8WZ26 134 aa1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 PPP3R2Q96LZ3 170 aa1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 OR4C12Q96R67 309 aa1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 SLC35B3Q9H1N7 401 aa1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 SCN3BQ9NY72 215 aa1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 CCDC167Q9P0B6 97 aa1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 METTL1Q9UBP6 276 aaKnown RBP1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 NAIPQ13075 1403 aa1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 MYOM2P54296 1465 aa1.62□□□□□ -2.15
HMGB3P31-201ENST00000413333 MUC6Q6W4X9 2439 aa1.61□□□□□ -2.15
HMGB3P31-201ENST00000413333 HEATR1Q9H583 2144 aaKnown RBP1.61□□□□□ -2.15
HMGB3P31-201ENST00000413333 COL24A1Q17RW2 1714 aa1.61□□□□□ -2.15
HMGB3P31-201ENST00000413333 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.61□□□□□ -2.15
HMGB3P31-201ENST00000413333 C20orf202A1L168 122 aa1.61□□□□□ -2.15
HMGB3P31-201ENST00000413333 E7EUB6 86 aa1.61□□□□□ -2.15
HMGB3P31-201ENST00000413333 CDC42EP2O14613 210 aa1.61□□□□□ -2.15
HMGB3P31-201ENST00000413333 CD3DP04234 171 aa1.61□□□□□ -2.15
HMGB3P31-201ENST00000413333 CD14P08571 375 aa1.61□□□□□ -2.15
HMGB3P31-201ENST00000413333 SLC25A4P12235 298 aa1.61□□□□□ -2.15
HMGB3P31-201ENST00000413333 MEIG1Q5JSS6 88 aa1.61□□□□□ -2.15
HMGB3P31-201ENST00000413333 CLEC2BQ92478 149 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms