RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 OR2K2Q8NGT1 345 aa8.7□□□□□ -1.02
SNRNP35-202ENST00000412157 TSKUQ8WUA8 353 aa8.7□□□□□ -1.02
SNRNP35-202ENST00000412157 CITED1Q99966 193 aa8.7□□□□□ -1.02
SNRNP35-202ENST00000412157 TRBV7-9A0A0J9YWB2 115 aa8.69□□□□□ -1.02
SNRNP35-202ENST00000412157 A0A0J9YX75 114 aa8.69□□□□□ -1.02
SNRNP35-202ENST00000412157 SMIM27A0A1W2PRY6 76 aa8.69□□□□□ -1.02
SNRNP35-202ENST00000412157 XKRY2A2RUG3 117 aa8.69□□□□□ -1.02
SNRNP35-202ENST00000412157 TMEM189A5PLL7 270 aa8.69□□□□□ -1.02
SNRNP35-202ENST00000412157 FABP5P3A8MUU1 101 aa8.69□□□□□ -1.02
SNRNP35-202ENST00000412157 CA1P00915 261 aaPredicted RBP8.69□□□□□ -1.02
SNRNP35-202ENST00000412157 TCL1AP56279 114 aa8.69□□□□□ -1.02
SNRNP35-202ENST00000412157 DEFB1P60022 68 aa8.69□□□□□ -1.02
SNRNP35-202ENST00000412157 RPS20P60866 119 aaKnown RBP8.69□□□□□ -1.02
SNRNP35-202ENST00000412157 FOXI2Q6ZQN5 318 aa8.69□□□□□ -1.02
SNRNP35-202ENST00000412157 PYGO2Q9BRQ0 406 aa8.69□□□□□ -1.02
SNRNP35-202ENST00000412157 NAT8BQ9UHF3 227 aa8.69□□□□□ -1.02
SNRNP35-202ENST00000412157 IZUMO1RA6ND01 250 aa8.68□□□□□ -1.02
SNRNP35-202ENST00000412157 C1orf196B1AJZ1 125 aa8.68□□□□□ -1.02
SNRNP35-202ENST00000412157 CD33P20138 364 aa8.68□□□□□ -1.02
SNRNP35-202ENST00000412157 LEPP41159 167 aa8.68□□□□□ -1.02
SNRNP35-202ENST00000412157 CRIP1P50238 77 aa8.68□□□□□ -1.02
SNRNP35-202ENST00000412157 DEFB131AP59861 70 aa8.68□□□□□ -1.02
SNRNP35-202ENST00000412157 LINC00482Q8N8I6 264 aa8.68□□□□□ -1.02
SNRNP35-202ENST00000412157 ODF3Q96PU9 254 aa8.68□□□□□ -1.02
SNRNP35-202ENST00000412157 GFRA4Q9GZZ7 299 aa8.68□□□□□ -1.02
SNRNP35-202ENST00000412157 SAV1Q9H4B6 383 aaPredicted RBP8.68□□□□□ -1.02
SNRNP35-202ENST00000412157 FAM231BA6NCW3 169 aa8.67□□□□□ -1.02
SNRNP35-202ENST00000412157 TYMSP04818 313 aa8.67□□□□□ -1.02
SNRNP35-202ENST00000412157 ZNF80P51504 273 aaPredicted RBP8.67□□□□□ -1.02
SNRNP35-202ENST00000412157 CMC4P56277 68 aaPredicted RBP8.67□□□□□ -1.02
SNRNP35-202ENST00000412157 RAB5BP61020 215 aa8.67□□□□□ -1.02
SNRNP35-202ENST00000412157 COX19Q49B96 90 aa8.67□□□□□ -1.02
SNRNP35-202ENST00000412157 NEU1Q99519 415 aa8.67□□□□□ -1.02
SNRNP35-202ENST00000412157 SRD5A3Q9H8P0 318 aa8.67□□□□□ -1.02
SNRNP35-202ENST00000412157 MAP6D1Q9H9H5 199 aa8.67□□□□□ -1.02
SNRNP35-202ENST00000412157 TRAV21A0A0B4J279 112 aa8.66□□□□□ -1.02
SNRNP35-202ENST00000412157 HIGD1CA8MV81 97 aa8.66□□□□□ -1.02
SNRNP35-202ENST00000412157 J3KRW8 73 aa8.66□□□□□ -1.02
SNRNP35-202ENST00000412157 IGLV1-51P01701 117 aa8.66□□□□□ -1.02
SNRNP35-202ENST00000412157 ORM1P02763 201 aa8.66□□□□□ -1.02
SNRNP35-202ENST00000412157 GPX1P07203 203 aa8.66□□□□□ -1.02
SNRNP35-202ENST00000412157 CRISP2P16562 243 aa8.66□□□□□ -1.02
SNRNP35-202ENST00000412157 TSPOP30536 169 aa8.66□□□□□ -1.02
SNRNP35-202ENST00000412157 GDF5OSQ5U4N7 250 aa8.66□□□□□ -1.02
SNRNP35-202ENST00000412157 Q6AWC8 147 aa8.66□□□□□ -1.02
SNRNP35-202ENST00000412157 ZFAND2AQ8N6M9 145 aa8.66□□□□□ -1.02
SNRNP35-202ENST00000412157 BORCS7Q96B45 105 aa8.66□□□□□ -1.02
SNRNP35-202ENST00000412157 FAM19A4Q96LR4 140 aa8.66□□□□□ -1.02
SNRNP35-202ENST00000412157 AGRNO00468 2067 aa8.65□□□□□ -1.02
SNRNP35-202ENST00000412157 TMSB15BA0A087X1C1 80 aa8.65□□□□□ -1.02
SNRNP35-202ENST00000412157 SPINK4O60575 86 aa8.65□□□□□ -1.02
SNRNP35-202ENST00000412157 GZMBP10144 247 aa8.65□□□□□ -1.02
SNRNP35-202ENST00000412157 HLA-DRB4P13762 266 aa8.65□□□□□ -1.02
SNRNP35-202ENST00000412157 LINC01559Q495D7 138 aa8.65□□□□□ -1.02
SNRNP35-202ENST00000412157 C9orf66Q5T8R8 295 aa8.65□□□□□ -1.02
SNRNP35-202ENST00000412157 NUP35Q8NFH5 326 aa8.65□□□□□ -1.02
SNRNP35-202ENST00000412157 ZNF256Q9Y2P7 627 aaPredicted RBP8.65□□□□□ -1.02
SNRNP35-202ENST00000412157 HLA-DRB4X5D2U9 266 aa8.65□□□□□ -1.02
SNRNP35-202ENST00000412157 KNCNA6PVL3 124 aa8.64□□□□□ -1.03
SNRNP35-202ENST00000412157 OR11H12B2RN74 326 aa8.64□□□□□ -1.03
SNRNP35-202ENST00000412157 IGKV3-20P01619 116 aa8.64□□□□□ -1.03
SNRNP35-202ENST00000412157 RNASE4P34096 147 aaKnown RBP8.64□□□□□ -1.03
SNRNP35-202ENST00000412157 INSL3P51460 131 aa8.64□□□□□ -1.03
SNRNP35-202ENST00000412157 ACTL10Q5JWF8 245 aa8.64□□□□□ -1.03
SNRNP35-202ENST00000412157 PRR9Q5T870 116 aa8.64□□□□□ -1.03
SNRNP35-202ENST00000412157 MRPL54Q6P161 138 aaKnown RBP8.64□□□□□ -1.03
SNRNP35-202ENST00000412157 WDR73Q6P4I2 378 aa8.64□□□□□ -1.03
SNRNP35-202ENST00000412157 RASL11AQ6T310 242 aa8.64□□□□□ -1.03
SNRNP35-202ENST00000412157 ATP5L2Q7Z4Y8 100 aa8.64□□□□□ -1.03
SNRNP35-202ENST00000412157 APRG1Q8IVJ8 170 aa8.64□□□□□ -1.03
SNRNP35-202ENST00000412157 C3orf56Q8N813 242 aa8.64□□□□□ -1.03
SNRNP35-202ENST00000412157 PGLYRP4Q96LB8 373 aa8.64□□□□□ -1.03
SNRNP35-202ENST00000412157 MCRIP2Q9BUT9 160 aaKnown RBP8.64□□□□□ -1.03
SNRNP35-202ENST00000412157 ZNF747Q9BV97 191 aa8.64□□□□□ -1.03
SNRNP35-202ENST00000412157 C7orf71A4D174 169 aa8.63□□□□□ -1.03
SNRNP35-202ENST00000412157 KLLNB2CW77 178 aa8.63□□□□□ -1.03
SNRNP35-202ENST00000412157 TRGC2P03986 189 aa8.63□□□□□ -1.03
SNRNP35-202ENST00000412157 CDKN1BP46527 198 aa8.63□□□□□ -1.03
SNRNP35-202ENST00000412157 GTSF1Q8WW33 167 aa8.63□□□□□ -1.03
SNRNP35-202ENST00000412157 NAGKQ9UJ70 344 aa8.63□□□□□ -1.03
SNRNP35-202ENST00000412157 TRAPPC1Q9Y5R8 145 aa8.63□□□□□ -1.03
SNRNP35-202ENST00000412157 SNURFLB1AK76 121 aa8.62□□□□□ -1.03
SNRNP35-202ENST00000412157 H3BMM0 161 aa8.62□□□□□ -1.03
SNRNP35-202ENST00000412157 MT-ND6P03923 174 aa8.62□□□□□ -1.03
SNRNP35-202ENST00000412157 RAB4BP61018 213 aa8.62□□□□□ -1.03
SNRNP35-202ENST00000412157 HBBP68871 147 aa8.62□□□□□ -1.03
SNRNP35-202ENST00000412157 RIGQ13278 110 aa8.62□□□□□ -1.03
SNRNP35-202ENST00000412157 SPINK13Q1W4C9 94 aa8.62□□□□□ -1.03
SNRNP35-202ENST00000412157 ODF3L2Q3SX64 289 aa8.62□□□□□ -1.03
SNRNP35-202ENST00000412157 STHQ8IWL8 128 aa8.62□□□□□ -1.03
SNRNP35-202ENST00000412157 ZFP82Q8N141 532 aa8.62□□□□□ -1.03
SNRNP35-202ENST00000412157 FER1L6-AS1Q8NA97 138 aa8.62□□□□□ -1.03
SNRNP35-202ENST00000412157 FRZBQ92765 325 aa8.62□□□□□ -1.03
SNRNP35-202ENST00000412157 TPPP3Q9BW30 176 aa8.62□□□□□ -1.03
SNRNP35-202ENST00000412157 A0A1B0GUT8 65 aa8.61□□□□□ -1.03
SNRNP35-202ENST00000412157 GRIFINA4D1Z8 144 aa8.61□□□□□ -1.03
SNRNP35-202ENST00000412157 A8MTW9 85 aa8.61□□□□□ -1.03
SNRNP35-202ENST00000412157 HLA-DQA1P01909 254 aa8.61□□□□□ -1.03
SNRNP35-202ENST00000412157 S100A8P05109 93 aa8.61□□□□□ -1.03
SNRNP35-202ENST00000412157 FOXA3P55318 350 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms