RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 CA1P00915 261 aaPredicted RBP13.68□□□□□ -0.22
CDC42-204ENST00000411827 SPINK13Q1W4C9 94 aa13.68□□□□□ -0.22
CDC42-204ENST00000411827 Q6ZWC4 215 aa13.68□□□□□ -0.22
CDC42-204ENST00000411827 SGK494Q96LW2 274 aa13.68□□□□□ -0.22
CDC42-204ENST00000411827 NAT8Q9UHE5 227 aa13.68□□□□□ -0.22
CDC42-204ENST00000411827 TRAV21A0A0B4J279 112 aa13.67□□□□□ -0.22
CDC42-204ENST00000411827 C7orf71A4D174 169 aa13.67□□□□□ -0.22
CDC42-204ENST00000411827 FABP5P3A8MUU1 101 aa13.67□□□□□ -0.22
CDC42-204ENST00000411827 FRMD6-AS1P0C7T7 363 aa13.67□□□□□ -0.22
CDC42-204ENST00000411827 PNRC1Q12796 327 aaPredicted RBP13.67□□□□□ -0.22
CDC42-204ENST00000411827 Q6AWC8 147 aa13.67□□□□□ -0.22
CDC42-204ENST00000411827 TVP23CQ96ET8 276 aa13.67□□□□□ -0.22
CDC42-204ENST00000411827 SEC11CQ9BY50 192 aa13.67□□□□□ -0.22
CDC42-204ENST00000411827 TRBV20OR9-2A0A075B6H5 130 aa13.66□□□□□ -0.22
CDC42-204ENST00000411827 M0R2Z0 102 aa13.66□□□□□ -0.22
CDC42-204ENST00000411827 FAM162BQ5T6X4 162 aa13.66□□□□□ -0.22
CDC42-204ENST00000411827 TP53TG1Q9Y2A0 90 aa13.66□□□□□ -0.22
CDC42-204ENST00000411827 GOLT1BQ9Y3E0 138 aa13.66□□□□□ -0.22
CDC42-204ENST00000411827 KRBOX1C9JBD0 128 aa13.65□□□□□ -0.22
CDC42-204ENST00000411827 H7BYZ3 331 aa13.65□□□□□ -0.22
CDC42-204ENST00000411827 GCGP01275 180 aa13.65□□□□□ -0.22
CDC42-204ENST00000411827 PFN1P07737 140 aaKnown RBP13.65□□□□□ -0.22
CDC42-204ENST00000411827 RNASE4P34096 147 aaKnown RBP13.65□□□□□ -0.22
CDC42-204ENST00000411827 DEFB121Q5J5C9 76 aa13.65□□□□□ -0.22
CDC42-204ENST00000411827 GFI1BQ5VTD9 330 aa13.65□□□□□ -0.22
CDC42-204ENST00000411827 XCL2Q9UBD3 114 aa13.65□□□□□ -0.22
CDC42-204ENST00000411827 AGRNO00468 2067 aa13.65□□□□□ -0.22
CDC42-204ENST00000411827 F8W036 122 aa13.64□□□□□ -0.23
CDC42-204ENST00000411827 CRXO43186 299 aaPredicted RBP13.64□□□□□ -0.23
CDC42-204ENST00000411827 GIG44P09565 113 aaPredicted RBP13.64□□□□□ -0.23
CDC42-204ENST00000411827 PRB4P10163 310 aaPredicted RBP13.64□□□□□ -0.23
CDC42-204ENST00000411827 OCC1Q8TAD7 63 aa13.64□□□□□ -0.23
CDC42-204ENST00000411827 MRAPQ8TCY5 172 aa13.64□□□□□ -0.23
CDC42-204ENST00000411827 DAZAP1Q96EP5 407 aaKnown RBP13.64□□□□□ -0.23
CDC42-204ENST00000411827 LINC00467Q9BRT7 94 aa13.64□□□□□ -0.23
CDC42-204ENST00000411827 IGLV2-8P01709 118 aa13.63□□□□□ -0.23
CDC42-204ENST00000411827 MGST1P10620 155 aaKnown RBP13.63□□□□□ -0.23
CDC42-204ENST00000411827 LINC01551Q86U37 167 aa13.63□□□□□ -0.23
CDC42-204ENST00000411827 ZC2HC1AQ96GY0 325 aa13.63□□□□□ -0.23
CDC42-204ENST00000411827 KCNS1Q96KK3 526 aa13.63□□□□□ -0.23
CDC42-204ENST00000411827 C8orf49Q96NF6 230 aa13.63□□□□□ -0.23
CDC42-204ENST00000411827 PYGO2Q9BRQ0 406 aa13.63□□□□□ -0.23
CDC42-204ENST00000411827 SDF2L1Q9HCN8 221 aa13.63□□□□□ -0.23
CDC42-204ENST00000411827 SMIM9A6NGZ8 99 aa13.62□□□□□ -0.23
CDC42-204ENST00000411827 ZNF324O75467 553 aaPredicted RBP13.62□□□□□ -0.23
CDC42-204ENST00000411827 PRB2P02812 416 aaPredicted RBP13.62□□□□□ -0.23
CDC42-204ENST00000411827 CSNK1G2-AS1Q8NCQ2 148 aa13.62□□□□□ -0.23
CDC42-204ENST00000411827 TMEM208Q9BTX3 173 aa13.62□□□□□ -0.23
CDC42-204ENST00000411827 TRAV12-2A0A075B6T6 113 aa13.61□□□□□ -0.23
CDC42-204ENST00000411827 TRAV12-3A0A0B4J271 114 aa13.61□□□□□ -0.23
CDC42-204ENST00000411827 FXYD7P58549 80 aa13.61□□□□□ -0.23
CDC42-204ENST00000411827 TDRG1Q3Y452 100 aa13.61□□□□□ -0.23
CDC42-204ENST00000411827 C10orf91Q5T1B1 145 aa13.61□□□□□ -0.23
CDC42-204ENST00000411827 RCHY1Q96PM5 261 aa13.61□□□□□ -0.23
CDC42-204ENST00000411827 NEU1Q99519 415 aa13.61□□□□□ -0.23
CDC42-204ENST00000411827 TGP01266 2768 aa13.61□□□□□ -0.23
CDC42-204ENST00000411827 B4DEV8 164 aa13.6□□□□□ -0.23
CDC42-204ENST00000411827 BTN1A1Q13410 526 aa13.6□□□□□ -0.23
CDC42-204ENST00000411827 FAM159AQ6UWV7 190 aa13.6□□□□□ -0.23
CDC42-204ENST00000411827 ZNF705AQ6ZN79 300 aaPredicted RBP13.6□□□□□ -0.23
CDC42-204ENST00000411827 FAM231DQ6ZW35 169 aa13.6□□□□□ -0.23
CDC42-204ENST00000411827 RNF183Q96D59 192 aa13.6□□□□□ -0.23
CDC42-204ENST00000411827 CARHSP1Q9Y2V2 147 aaKnown RBP13.6□□□□□ -0.23
CDC42-204ENST00000411827 XKRY2A2RUG3 117 aa13.59□□□□□ -0.23
CDC42-204ENST00000411827 J3KRW8 73 aa13.59□□□□□ -0.23
CDC42-204ENST00000411827 DEFA6Q01524 100 aa13.59□□□□□ -0.23
CDC42-204ENST00000411827 PRR9Q5T870 116 aa13.59□□□□□ -0.23
CDC42-204ENST00000411827 C15orf54Q8N8G6 183 aa13.59□□□□□ -0.23
CDC42-204ENST00000411827 NHLRC2Q8NBF2 726 aa13.59□□□□□ -0.23
CDC42-204ENST00000411827 LINC01587Q99440 93 aa13.59□□□□□ -0.23
CDC42-204ENST00000411827 IGHV1OR15-1A0A075B7D0 117 aa13.58□□□□□ -0.24
CDC42-204ENST00000411827 SPRY2O43597 315 aa13.58□□□□□ -0.24
CDC42-204ENST00000411827 SH2D1AO60880 128 aa13.58□□□□□ -0.24
CDC42-204ENST00000411827 P01737 135 aa13.58□□□□□ -0.24
CDC42-204ENST00000411827 CRIP1P50238 77 aa13.58□□□□□ -0.24
CDC42-204ENST00000411827 ZNF80P51504 273 aaPredicted RBP13.58□□□□□ -0.24
CDC42-204ENST00000411827 RPS20P60866 119 aaKnown RBP13.58□□□□□ -0.24
CDC42-204ENST00000411827 RPL23P62829 140 aaKnown RBP13.58□□□□□ -0.24
CDC42-204ENST00000411827 ZNF493Q6ZR52 646 aa13.58□□□□□ -0.24
CDC42-204ENST00000411827 SLC7A5P1Q8MH63 180 aa13.58□□□□□ -0.24
CDC42-204ENST00000411827 B9D2Q9BPU9 175 aa13.58□□□□□ -0.24
CDC42-204ENST00000411827 SPATA25Q9BR10 227 aa13.58□□□□□ -0.24
CDC42-204ENST00000411827 OSTCQ9NRP0 149 aa13.58□□□□□ -0.24
CDC42-204ENST00000411827 C19orf71A6NCJ1 209 aa13.57□□□□□ -0.24
CDC42-204ENST00000411827 PGPEP1LA6NFU8 196 aa13.57□□□□□ -0.24
CDC42-204ENST00000411827 CXCL1P09341 107 aa13.57□□□□□ -0.24
CDC42-204ENST00000411827 NHLRC4P0CG21 123 aaPredicted RBP13.57□□□□□ -0.24
CDC42-204ENST00000411827 KIR3DS1Q14943 382 aa13.57□□□□□ -0.24
CDC42-204ENST00000411827 ADIRFQ15847 76 aa13.57□□□□□ -0.24
CDC42-204ENST00000411827 ANXA2RQ3ZCQ2 193 aa13.57□□□□□ -0.24
CDC42-204ENST00000411827 LINC01559Q495D7 138 aa13.57□□□□□ -0.24
CDC42-204ENST00000411827 PRR27Q6MZM9 219 aa13.57□□□□□ -0.24
CDC42-204ENST00000411827 C1orf158Q8N1D5 194 aa13.57□□□□□ -0.24
CDC42-204ENST00000411827 TRGV11A0A075B6L2 103 aa13.56□□□□□ -0.24
CDC42-204ENST00000411827 K7EN84 100 aa13.56□□□□□ -0.24
CDC42-204ENST00000411827 PPP1R2P9O14990 202 aa13.56□□□□□ -0.24
CDC42-204ENST00000411827 ORM1P02763 201 aa13.56□□□□□ -0.24
CDC42-204ENST00000411827 ERVFC1-1P60608 527 aa13.56□□□□□ -0.24
CDC42-204ENST00000411827 DEFB135Q30KP9 77 aa13.56□□□□□ -0.24
CDC42-204ENST00000411827 CT83Q5H943 113 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms