RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 P0DMU3 169 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 FAM231AP0DMU4 169 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 FAM231CP0DMU5 169 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 HRES1P13985 223 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 SDC2P34741 201 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 ARPP19P56211 112 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 PDZD9Q8IXQ8 264 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 ZC2HC1AQ96GY0 325 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 PRADC1Q9BSG0 188 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 MARCOQ9UEW3 520 aaPredicted RBP2.79□□□□□ -1.96
LSM5-206ENST00000409987 Q9Y3F1 56 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 FANCMQ8IYD8 2048 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 UTP20O75691 2785 aaKnown RBP2.79□□□□□ -1.96
LSM5-206ENST00000409987 DOCK1Q14185 1865 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 CDK5RAP2Q96SN8 1893 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 BSNQ9UPA5 3926 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 A0A1B0GUL6 1792 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 NIPBLQ6KC79 2804 aaeCLIP2.78□□□□□ -1.96
LSM5-206ENST00000409987 CELSR1Q9NYQ6 3014 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 MYH2Q9UKX2 1941 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 CELSR2Q9HCU4 2923 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 SIP14410 1827 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 PTPRQQ9UMZ3 2332 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 IGHV1-58A0A0C4DH39 117 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 J3QQQ9 107 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 OR2H2O95918 312 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 COX6A1P12074 109 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 DEFA4P12838 97 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 HLA-EP13747 358 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 HBBP68871 147 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 MYL5Q02045 173 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 KRTAP21-3Q3LHN1 58 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 VMA21Q3ZAQ7 101 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 FAM27BQ5VT28 67 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 EIF5AL1Q6IS14 154 aaKnown RBP2.78□□□□□ -1.96
LSM5-206ENST00000409987 RPL13AP3Q6NVV1 102 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 CGREF1Q99674 301 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 VPS25Q9BRG1 176 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 NPCDR1Q9BY65 106 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 ADGRG4Q8IZF6 3080 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 LRRK2Q5S007 2527 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 DOCK6Q96HP0 2047 aa2.78□□□□□ -1.96
LSM5-206ENST00000409987 ACACAQ13085 2346 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 OTOGQ6ZRI0 2925 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 IGHV3-64A0A075B6Q5 118 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 IGHV1-18A0A0C4DH31 117 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 TRBV7-6A0A0J9YX20 115 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 A0A1B0GW64 132 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 C5orf58C9J3I9 102 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 PRB1P04280 392 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 HTR1AP08908 422 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 FABP2P12104 132 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 FUSP35637 526 aaKnown RBP eCLIP2.77□□□□□ -1.97
LSM5-206ENST00000409987 DEFB134Q4QY38 66 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 PYDC2Q56P42 97 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 LINC00305Q7Z4B0 112 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 LRRC28Q86X40 367 aaPredicted RBP2.77□□□□□ -1.97
LSM5-206ENST00000409987 C3orf56Q8N813 242 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 HS3ST2Q9Y278 367 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 U3KQ87 197 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 CRYBG3Q68DQ2 2970 aa2.77□□□□□ -1.97
LSM5-206ENST00000409987 NAV3Q8IVL0 2385 aa2.76□□□□□ -1.97
LSM5-206ENST00000409987 APC2O95996 2303 aa2.76□□□□□ -1.97
LSM5-206ENST00000409987 USP9YO00507 2555 aaPredicted RBP2.76□□□□□ -1.97
LSM5-206ENST00000409987 PTPRSQ13332 1948 aa2.76□□□□□ -1.97
LSM5-206ENST00000409987 LOC107984640A0A0U1RRK4 108 aa2.76□□□□□ -1.97
LSM5-206ENST00000409987 G3V3Q6 166 aa2.76□□□□□ -1.97
LSM5-206ENST00000409987 HIST1H2BKO60814 126 aa2.76□□□□□ -1.97
LSM5-206ENST00000409987 PGLYRP1O75594 196 aaPredicted RBP2.76□□□□□ -1.97
LSM5-206ENST00000409987 HIST1H2BJP06899 126 aa2.76□□□□□ -1.97
LSM5-206ENST00000409987 EVI2AP22794 236 aa2.76□□□□□ -1.97
LSM5-206ENST00000409987 RPL35P42766 123 aaKnown RBP2.76□□□□□ -1.97
LSM5-206ENST00000409987 HIST1H1AQ02539 215 aaPredicted RBP2.76□□□□□ -1.97
LSM5-206ENST00000409987 Q5XG85 94 aa2.76□□□□□ -1.97
LSM5-206ENST00000409987 SOSTDC1Q6X4U4 206 aa2.76□□□□□ -1.97
LSM5-206ENST00000409987 OR4E2Q8NGC2 313 aa2.76□□□□□ -1.97
LSM5-206ENST00000409987 NHP2Q9NX24 153 aaKnown RBP2.76□□□□□ -1.97
LSM5-206ENST00000409987 AKAP9Q99996 3911 aa2.76□□□□□ -1.97
LSM5-206ENST00000409987 PDZD2O15018 2839 aa2.76□□□□□ -1.97
LSM5-206ENST00000409987 THADAQ6YHU6 1953 aa2.76□□□□□ -1.97
LSM5-206ENST00000409987 CCDC171Q6TFL3 1326 aa2.75□□□□□ -1.97
LSM5-206ENST00000409987 A0A096LPI6 279 aa2.75□□□□□ -1.97
LSM5-206ENST00000409987 A0A1W2PNM2 257 aa2.75□□□□□ -1.97
LSM5-206ENST00000409987 DYNLT1P63172 113 aa2.75□□□□□ -1.97
LSM5-206ENST00000409987 NDUFA5Q16718 116 aa2.75□□□□□ -1.97
LSM5-206ENST00000409987 SLC30A7Q8NEW0 376 aa2.75□□□□□ -1.97
LSM5-206ENST00000409987 OR51A4Q8NGJ6 313 aa2.75□□□□□ -1.97
LSM5-206ENST00000409987 CMTM2Q8TAZ6 248 aa2.75□□□□□ -1.97
LSM5-206ENST00000409987 AQP3Q92482 292 aa2.75□□□□□ -1.97
LSM5-206ENST00000409987 ZNF714Q96N38 554 aa2.75□□□□□ -1.97
LSM5-206ENST00000409987 PSORS1C2Q9UIG4 136 aa2.75□□□□□ -1.97
LSM5-206ENST00000409987 URB1O60287 2271 aaKnown RBP2.75□□□□□ -1.97
LSM5-206ENST00000409987 COL11A1P12107 1806 aaPredicted RBP2.75□□□□□ -1.97
LSM5-206ENST00000409987 DOCK2Q92608 1830 aa2.75□□□□□ -1.97
LSM5-206ENST00000409987 ODF3BA8MYP8 253 aa2.74□□□□□ -1.97
LSM5-206ENST00000409987 H3BMG7 143 aa2.74□□□□□ -1.97
LSM5-206ENST00000409987 K7ERJ3 54 aa2.74□□□□□ -1.97
LSM5-206ENST00000409987 SDCBPO00560 298 aaPredicted RBP2.74□□□□□ -1.97
LSM5-206ENST00000409987 CLPSP04118 112 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms