RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 TSTD3H0UI37 97 aa5.7□□□□□ -1.5
CXCR4-202ENST00000409817 ZNF324O75467 553 aaPredicted RBP5.7□□□□□ -1.5
CXCR4-202ENST00000409817 RAB4AP20338 218 aa5.7□□□□□ -1.5
CXCR4-202ENST00000409817 CTRLP40313 264 aa5.7□□□□□ -1.5
CXCR4-202ENST00000409817 PKIAP61925 76 aa5.7□□□□□ -1.5
CXCR4-202ENST00000409817 RNF182Q8N6D2 247 aa5.7□□□□□ -1.5
CXCR4-202ENST00000409817 CHCHD1Q96BP2 118 aaKnown RBP5.7□□□□□ -1.5
CXCR4-202ENST00000409817 AGPAT4-IT1Q9H0P7 198 aa5.7□□□□□ -1.5
CXCR4-202ENST00000409817 SMPXQ9UHP9 88 aa5.7□□□□□ -1.5
CXCR4-202ENST00000409817 NAV2Q8IVL1 2488 aa5.69□□□□□ -1.5
CXCR4-202ENST00000409817 IGHV3-49A0A0A0MS15 119 aa5.69□□□□□ -1.5
CXCR4-202ENST00000409817 PRAC2D3DTV9 90 aa5.69□□□□□ -1.5
CXCR4-202ENST00000409817 SOCS3O14543 225 aa5.69□□□□□ -1.5
CXCR4-202ENST00000409817 ARMS2P0C7Q2 107 aa5.69□□□□□ -1.5
CXCR4-202ENST00000409817 IGLC6P0CF74 106 aa5.69□□□□□ -1.5
CXCR4-202ENST00000409817 AMTP48728 403 aa5.69□□□□□ -1.5
CXCR4-202ENST00000409817 XP32Q5T750 250 aa5.69□□□□□ -1.5
CXCR4-202ENST00000409817 IGFL4Q6B9Z1 124 aa5.69□□□□□ -1.5
CXCR4-202ENST00000409817 FER1L6-AS1Q8NA97 138 aa5.69□□□□□ -1.5
CXCR4-202ENST00000409817 Q8TAT8 98 aa5.69□□□□□ -1.5
CXCR4-202ENST00000409817 UBE2E2Q96LR5 201 aa5.69□□□□□ -1.5
CXCR4-202ENST00000409817 RHPN1-AS1Q9BWJ2 59 aa5.69□□□□□ -1.5
CXCR4-202ENST00000409817 CNFNQ9BYD5 112 aa5.69□□□□□ -1.5
CXCR4-202ENST00000409817 ZNF702PQ9H963 129 aa5.69□□□□□ -1.5
CXCR4-202ENST00000409817 USP9YO00507 2555 aaPredicted RBP5.69□□□□□ -1.5
CXCR4-202ENST00000409817 CREBBPQ92793 2442 aa5.69□□□□□ -1.5
CXCR4-202ENST00000409817 LGALS9O00182 355 aa5.68□□□□□ -1.5
CXCR4-202ENST00000409817 HSBP1O75506 76 aa5.68□□□□□ -1.5
CXCR4-202ENST00000409817 LGALS1P09382 135 aaKnown RBP5.68□□□□□ -1.5
CXCR4-202ENST00000409817 PMCHP20382 165 aa5.68□□□□□ -1.5
CXCR4-202ENST00000409817 ID1P41134 155 aa5.68□□□□□ -1.5
CXCR4-202ENST00000409817 LYZL1Q6UWQ5 148 aa5.68□□□□□ -1.5
CXCR4-202ENST00000409817 IL17RELQ6ZVW7 336 aa5.68□□□□□ -1.5
CXCR4-202ENST00000409817 Q71RC1 249 aaPredicted RBP5.68□□□□□ -1.5
CXCR4-202ENST00000409817 ZNF738Q8NE65 137 aa5.68□□□□□ -1.5
CXCR4-202ENST00000409817 OR10J6PQ8NGY7 276 aa5.68□□□□□ -1.5
CXCR4-202ENST00000409817 RCHY1Q96PM5 261 aa5.68□□□□□ -1.5
CXCR4-202ENST00000409817 NAGKQ9UJ70 344 aa5.68□□□□□ -1.5
CXCR4-202ENST00000409817 SCGB1D1O95968 90 aa5.68□□□□□ -1.5
CXCR4-202ENST00000409817 ORM1P02763 201 aa5.68□□□□□ -1.5
CXCR4-202ENST00000409817 ZNF80P51504 273 aaPredicted RBP5.68□□□□□ -1.5
CXCR4-202ENST00000409817 ERCC8Q13216 396 aa5.68□□□□□ -1.5
CXCR4-202ENST00000409817 Q6ZWC4 215 aa5.68□□□□□ -1.5
CXCR4-202ENST00000409817 J3KRW8 73 aa5.67□□□□□ -1.5
CXCR4-202ENST00000409817 LCNL1Q6ZST4 164 aa5.67□□□□□ -1.5
CXCR4-202ENST00000409817 FOXC2Q99958 501 aa5.67□□□□□ -1.5
CXCR4-202ENST00000409817 TPPP3Q9BW30 176 aa5.67□□□□□ -1.5
CXCR4-202ENST00000409817 PPBPP02775 128 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 OR5AL1P0C617 328 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 BTF3P20290 206 aaKnown RBP5.66□□□□□ -1.5
CXCR4-202ENST00000409817 SCGB2A2Q13296 93 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 FAM104BQ5XKR9 115 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 NIT1Q86X76 327 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 TMEM191AQ9H0A3 160 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 U3KQK5 164 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 TMSB15BA0A087X1C1 80 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 TRAV21A0A0B4J279 112 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 TMEM213A2RRL7 107 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 M0R2Z0 102 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 LINC00614P0C842 121 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 CACNG7P62955 275 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 RNASEKQ6P5S7 137 aaKnown RBP5.66□□□□□ -1.5
CXCR4-202ENST00000409817 TEX43Q6ZNM6 134 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 APRG1Q8IVJ8 170 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 ORMDL3Q8N138 153 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 WFDC11Q8NEX6 87 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 OR8A1Q8NGG7 326 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 C20orf173Q96LM9 149 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 FAM19A4Q96LR4 140 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 KRTAP4-8Q9BYQ9 185 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 LAMTOR2Q9Y2Q5 125 aa5.66□□□□□ -1.5
CXCR4-202ENST00000409817 ASH1LQ9NR48 2969 aaKnown RBP5.66□□□□□ -1.5
CXCR4-202ENST00000409817 IGKV3D-20A0A0C4DH25 116 aa5.65□□□□□ -1.5
CXCR4-202ENST00000409817 LINC00587B1AMM8 73 aa5.65□□□□□ -1.5
CXCR4-202ENST00000409817 M0QZ24 198 aa5.65□□□□□ -1.5
CXCR4-202ENST00000409817 TWIST1Q15672 202 aa5.65□□□□□ -1.5
CXCR4-202ENST00000409817 ZNF664Q8N3J9 261 aa5.65□□□□□ -1.5
CXCR4-202ENST00000409817 DCANP1Q8TF63 244 aa5.65□□□□□ -1.5
CXCR4-202ENST00000409817 ODF3Q96PU9 254 aa5.65□□□□□ -1.5
CXCR4-202ENST00000409817 IGHV4-4A0A075B6R2 117 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 SNAI2O43623 268 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 CD5LO43866 347 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 TNFRSF6BO95407 300 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 ZNF705DP0CH99 300 aaPredicted RBP5.64□□□□□ -1.51
CXCR4-202ENST00000409817 ZNF705BP0CI00 300 aaPredicted RBP5.64□□□□□ -1.51
CXCR4-202ENST00000409817 PRB4P10163 310 aaPredicted RBP5.64□□□□□ -1.51
CXCR4-202ENST00000409817 NTF3P20783 257 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 DDTP30046 118 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 KRTDAPP60985 99 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 SNRPD3P62318 126 aaKnown RBP5.64□□□□□ -1.51
CXCR4-202ENST00000409817 PMCHL1Q16048 86 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 SMIM15Q7Z3B0 74 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 ZNF575Q86XF7 245 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 ZFAND2AQ8N6M9 145 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 KLHDC1Q8N7A1 406 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 SYT8Q8NBV8 401 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 FBN2P35556 2912 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 POLQO75417 2590 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 DOPEY2Q9Y3R5 2298 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 KIR2DL5BA0A0G2JN68 375 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms