RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 PPP1R14DQ9NXH3 145 aa9.28□□□□□ -0.92
CHMP3-204ENST00000409727 ZNF256Q9Y2P7 627 aaPredicted RBP9.28□□□□□ -0.92
CHMP3-204ENST00000409727 TENM1Q9UKZ4 2725 aa9.28□□□□□ -0.92
CHMP3-204ENST00000409727 A0A0J9YX75 114 aa9.28□□□□□ -0.92
CHMP3-204ENST00000409727 KIR3DS1Q14943 382 aa9.28□□□□□ -0.92
CHMP3-204ENST00000409727 MAP6D1Q9H9H5 199 aa9.28□□□□□ -0.92
CHMP3-204ENST00000409727 ATRQ13535 2644 aa9.27□□□□□ -0.92
CHMP3-204ENST00000409727 SORL1Q92673 2214 aa9.27□□□□□ -0.92
CHMP3-204ENST00000409727 TRAV2A0A0B4J234 112 aa9.27□□□□□ -0.93
CHMP3-204ENST00000409727 TRAV25A0A0B4J276 109 aa9.27□□□□□ -0.93
CHMP3-204ENST00000409727 SMIM27A0A1W2PRY6 76 aa9.27□□□□□ -0.93
CHMP3-204ENST00000409727 GPX1P07203 203 aa9.27□□□□□ -0.93
CHMP3-204ENST00000409727 RNASE4P34096 147 aaKnown RBP9.27□□□□□ -0.93
CHMP3-204ENST00000409727 COX8CQ7Z4L0 72 aa9.27□□□□□ -0.93
CHMP3-204ENST00000409727 TSKUQ8WUA8 353 aa9.27□□□□□ -0.93
CHMP3-204ENST00000409727 NEU1Q99519 415 aa9.27□□□□□ -0.93
CHMP3-204ENST00000409727 SAV1Q9H4B6 383 aaPredicted RBP9.27□□□□□ -0.93
CHMP3-204ENST00000409727 TRBV24-1A0A075B6N3 115 aa9.26□□□□□ -0.93
CHMP3-204ENST00000409727 TMEM189A5PLL7 270 aa9.26□□□□□ -0.93
CHMP3-204ENST00000409727 FABP5P3A8MUU1 101 aa9.26□□□□□ -0.93
CHMP3-204ENST00000409727 IGLV1-51P01701 117 aa9.26□□□□□ -0.93
CHMP3-204ENST00000409727 ORM1P02763 201 aa9.26□□□□□ -0.93
CHMP3-204ENST00000409727 FOXI2Q6ZQN5 318 aa9.26□□□□□ -0.93
CHMP3-204ENST00000409727 ZFAND2AQ8N6M9 145 aa9.26□□□□□ -0.93
CHMP3-204ENST00000409727 C3orf56Q8N813 242 aa9.26□□□□□ -0.93
CHMP3-204ENST00000409727 TPPP3Q9BW30 176 aa9.26□□□□□ -0.93
CHMP3-204ENST00000409727 HIGD1CA8MV81 97 aa9.25□□□□□ -0.93
CHMP3-204ENST00000409727 A8MWL6 223 aa9.25□□□□□ -0.93
CHMP3-204ENST00000409727 GTSF1Q8WW33 167 aa9.25□□□□□ -0.93
CHMP3-204ENST00000409727 NAGKQ9UJ70 344 aa9.25□□□□□ -0.93
CHMP3-204ENST00000409727 M0R2Z0 102 aa9.25□□□□□ -0.93
CHMP3-204ENST00000409727 FRMD6-AS1P0C7T7 363 aa9.25□□□□□ -0.93
CHMP3-204ENST00000409727 FXYD7P58549 80 aa9.25□□□□□ -0.93
CHMP3-204ENST00000409727 MRPL54Q6P161 138 aaKnown RBP9.25□□□□□ -0.93
CHMP3-204ENST00000409727 ZFP82Q8N141 532 aa9.25□□□□□ -0.93
CHMP3-204ENST00000409727 NUP35Q8NFH5 326 aa9.25□□□□□ -0.93
CHMP3-204ENST00000409727 BTF3L4Q96K17 158 aa9.25□□□□□ -0.93
CHMP3-204ENST00000409727 PGLYRP4Q96LB8 373 aa9.25□□□□□ -0.93
CHMP3-204ENST00000409727 FAM19A4Q96LR4 140 aa9.25□□□□□ -0.93
CHMP3-204ENST00000409727 PYGO2Q9BRQ0 406 aa9.25□□□□□ -0.93
CHMP3-204ENST00000409727 NAT8BQ9UHF3 227 aa9.25□□□□□ -0.93
CHMP3-204ENST00000409727 LENEPQ9Y5L5 61 aa9.25□□□□□ -0.93
CHMP3-204ENST00000409727 AGRNO00468 2067 aa9.24□□□□□ -0.93
CHMP3-204ENST00000409727 TRAV12-2A0A075B6T6 113 aa9.24□□□□□ -0.93
CHMP3-204ENST00000409727 SSTP61278 116 aa9.24□□□□□ -0.93
CHMP3-204ENST00000409727 SPINK13Q1W4C9 94 aa9.24□□□□□ -0.93
CHMP3-204ENST00000409727 ODF3L2Q3SX64 289 aa9.24□□□□□ -0.93
CHMP3-204ENST00000409727 CT83Q5H943 113 aa9.24□□□□□ -0.93
CHMP3-204ENST00000409727 GRIFINA4D1Z8 144 aa9.23□□□□□ -0.93
CHMP3-204ENST00000409727 DUSP14O95147 198 aaKnown RBP9.23□□□□□ -0.93
CHMP3-204ENST00000409727 C12orf54Q6X4T0 127 aa9.23□□□□□ -0.93
CHMP3-204ENST00000409727 C11orf21Q9P2W6 132 aa9.23□□□□□ -0.93
CHMP3-204ENST00000409727 FBN1P35555 2871 aaKnown RBP9.23□□□□□ -0.93
CHMP3-204ENST00000409727 OR11H12B2RN74 326 aa9.23□□□□□ -0.93
CHMP3-204ENST00000409727 TRGC2P03986 189 aa9.23□□□□□ -0.93
CHMP3-204ENST00000409727 CD7P09564 240 aa9.23□□□□□ -0.93
CHMP3-204ENST00000409727 HLA-DRB4P13762 266 aa9.23□□□□□ -0.93
CHMP3-204ENST00000409727 ZNF747Q9BV97 191 aa9.23□□□□□ -0.93
CHMP3-204ENST00000409727 HLA-DRB4X5D2U9 266 aa9.23□□□□□ -0.93
CHMP3-204ENST00000409727 TRAV12-3A0A0B4J271 114 aa9.22□□□□□ -0.93
CHMP3-204ENST00000409727 IGKV3D-20A0A0C4DH25 116 aa9.22□□□□□ -0.93
CHMP3-204ENST00000409727 MUC21A0A0G2JKD1 596 aa9.22□□□□□ -0.93
CHMP3-204ENST00000409727 MUC21A0A140T8X8 626 aa9.22□□□□□ -0.93
CHMP3-204ENST00000409727 H3BMM0 161 aa9.22□□□□□ -0.93
CHMP3-204ENST00000409727 CRISP2P16562 243 aa9.22□□□□□ -0.93
CHMP3-204ENST00000409727 LEPP41159 167 aa9.22□□□□□ -0.93
CHMP3-204ENST00000409727 RAB4BP61018 213 aa9.22□□□□□ -0.93
CHMP3-204ENST00000409727 PRR31Q5SQ13 230 aa9.22□□□□□ -0.93
CHMP3-204ENST00000409727 MUC21Q5SSG8 566 aa9.22□□□□□ -0.93
CHMP3-204ENST00000409727 WFDC10AQ9H1F0 79 aa9.22□□□□□ -0.93
CHMP3-204ENST00000409727 TRAV9-1A0A075B6T8 112 aa9.21□□□□□ -0.93
CHMP3-204ENST00000409727 TRAV21A0A0B4J279 112 aa9.21□□□□□ -0.93
CHMP3-204ENST00000409727 XKRY2A2RUG3 117 aa9.21□□□□□ -0.93
CHMP3-204ENST00000409727 KLLNB2CW77 178 aa9.21□□□□□ -0.93
CHMP3-204ENST00000409727 OR2K2Q8NGT1 345 aa9.21□□□□□ -0.93
CHMP3-204ENST00000409727 TMEM158Q8WZ71 300 aa9.21□□□□□ -0.93
CHMP3-204ENST00000409727 GFRA4Q9GZZ7 299 aa9.21□□□□□ -0.93
CHMP3-204ENST00000409727 SRD5A3Q9H8P0 318 aa9.21□□□□□ -0.93
CHMP3-204ENST00000409727 TRBV7-9A0A0J9YWB2 115 aa9.21□□□□□ -0.94
CHMP3-204ENST00000409727 RBMY1BA6NDE4 496 aaKnown RBP9.21□□□□□ -0.94
CHMP3-204ENST00000409727 RBMY1EA6NEQ0 496 aaKnown RBP9.21□□□□□ -0.94
CHMP3-204ENST00000409727 C1orf196B1AJZ1 125 aa9.21□□□□□ -0.94
CHMP3-204ENST00000409727 TYMSP04818 313 aa9.21□□□□□ -0.94
CHMP3-204ENST00000409727 RBMY1DP0C7P1 496 aaKnown RBP9.21□□□□□ -0.94
CHMP3-204ENST00000409727 CDKN1BP46527 198 aa9.21□□□□□ -0.94
CHMP3-204ENST00000409727 CAMPP49913 170 aa9.21□□□□□ -0.94
CHMP3-204ENST00000409727 LINC01559Q495D7 138 aa9.21□□□□□ -0.94
CHMP3-204ENST00000409727 C9orf66Q5T8R8 295 aa9.21□□□□□ -0.94
CHMP3-204ENST00000409727 GFI1BQ5VTD9 330 aa9.21□□□□□ -0.94
CHMP3-204ENST00000409727 AMTNQ6UX39 209 aa9.21□□□□□ -0.94
CHMP3-204ENST00000409727 FRZBQ92765 325 aa9.21□□□□□ -0.94
CHMP3-204ENST00000409727 IGLL1P15814 213 aa9.2□□□□□ -0.94
CHMP3-204ENST00000409727 ZNF575Q86XF7 245 aa9.2□□□□□ -0.94
CHMP3-204ENST00000409727 ODF3Q96PU9 254 aa9.2□□□□□ -0.94
CHMP3-204ENST00000409727 TIMM8BQ9Y5J9 83 aaPredicted RBP9.2□□□□□ -0.94
CHMP3-204ENST00000409727 TRAPPC1Q9Y5R8 145 aa9.2□□□□□ -0.94
CHMP3-204ENST00000409727 C7orf71A4D174 169 aa9.19□□□□□ -0.94
CHMP3-204ENST00000409727 SNURFLB1AK76 121 aa9.19□□□□□ -0.94
CHMP3-204ENST00000409727 TSPOP30536 169 aa9.19□□□□□ -0.94
CHMP3-204ENST00000409727 RPS20P60866 119 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms