RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 TRAV25A0A0B4J276 109 aa13.21□□□□□ -0.29
PCDHA13-202ENST00000409494 TEX48A0A1B0GUV7 120 aa13.21□□□□□ -0.29
PCDHA13-202ENST00000409494 LSM4Q9Y4Z0 139 aaKnown RBP13.21□□□□□ -0.29
PCDHA13-202ENST00000409494 Q6ZWC4 215 aa13.21□□□□□ -0.29
PCDHA13-202ENST00000409494 FXYD7P58549 80 aa13.21□□□□□ -0.3
PCDHA13-202ENST00000409494 SPINK13Q1W4C9 94 aa13.21□□□□□ -0.3
PCDHA13-202ENST00000409494 NCOA6Q14686 2063 aaPredicted RBP13.21□□□□□ -0.3
PCDHA13-202ENST00000409494 IGHG2P01859 326 aa13.2□□□□□ -0.3
PCDHA13-202ENST00000409494 MYCNOSP40205 109 aa13.2□□□□□ -0.3
PCDHA13-202ENST00000409494 FXYD5Q96DB9 178 aa13.2□□□□□ -0.3
PCDHA13-202ENST00000409494 CSTL1Q9H114 145 aa13.2□□□□□ -0.3
PCDHA13-202ENST00000409494 NOTCH2Q04721 2471 aa13.2□□□□□ -0.3
PCDHA13-202ENST00000409494 NOTCH3Q9UM47 2321 aa13.2□□□□□ -0.3
PCDHA13-202ENST00000409494 LY6G5BQ8NDX9 201 aa13.19□□□□□ -0.3
PCDHA13-202ENST00000409494 PYGO2Q9BRQ0 406 aa13.19□□□□□ -0.3
PCDHA13-202ENST00000409494 I3L2K1 104 aa13.19□□□□□ -0.3
PCDHA13-202ENST00000409494 SS18Q15532 418 aa13.19□□□□□ -0.3
PCDHA13-202ENST00000409494 FREM1Q5H8C1 2179 aa13.19□□□□□ -0.3
PCDHA13-202ENST00000409494 LMO4P61968 165 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 Q8N7P7 452 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 ZNF48Q96MX3 618 aaPredicted RBP13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 SLC25A20O43772 301 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 A0A087X0K7 114 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 DEFB130BP0DP73 79 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 DEFB130AP0DP74 79 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 CKS1BP61024 79 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 ZMAT4Q9H898 229 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 PTPRSQ13332 1948 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 TMEM238C9JI98 176 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 UBE2V1Q13404 147 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 MSMPQ1L6U9 139 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 TRBV7-9A0A0J9YWB2 115 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 SMIM27A0A1W2PRY6 76 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 COA6Q5JTJ3 125 aaKnown RBP13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 K7EIM0 57 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 FAM104BQ5XKR9 115 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 HIVEP2P31629 2446 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 ZFP36P26651 326 aaKnown RBP13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 ZNF493Q6ZR52 646 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 AMN1Q8IY45 258 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 GPHB5Q86YW7 130 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 NCKAP5O14513 1909 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 CLPSL1A2RUU4 121 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 TMEM158Q8WZ71 300 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 CGB3P0DN86 165 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 CGB7P0DN87 165 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 IGLC2P0DOY2 106 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 IGLC3P0DOY3 106 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 MEGF9Q9H1U4 602 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 WISP2O76076 250 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 AZU1P20160 251 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 Q71RC1 249 aaPredicted RBP13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 INSL3P51460 131 aa13.15□□□□□ -0.3
PCDHA13-202ENST00000409494 TMEM141Q96I45 108 aa13.15□□□□□ -0.3
PCDHA13-202ENST00000409494 TNFRSF6BO95407 300 aa13.15□□□□□ -0.3
PCDHA13-202ENST00000409494 IGHV3-53P01767 116 aa13.15□□□□□ -0.3
PCDHA13-202ENST00000409494 SAMD5Q5TGI4 173 aa13.15□□□□□ -0.3
PCDHA13-202ENST00000409494 ZNF843Q8N446 348 aa13.15□□□□□ -0.3
PCDHA13-202ENST00000409494 TRBV25-1A0A075B6N4 114 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 A6NDX4 124 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 RMI2Q96E14 147 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 CDPF1Q6NVV7 123 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 ZNF479Q96JC4 524 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 NUP210LQ5VU65 1888 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 ZNF815PA8K554 130 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 BLCAPP62952 87 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 SELENOKQ9Y6D0 94 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 ANXA2RQ3ZCQ2 193 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 BCL6BQ8N143 479 aaPredicted RBP13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 IGHV3-73A0A0B4J1V6 119 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 I3L3M4 83 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 K7EN84 100 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 IGKV1-17P01599 117 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 COX11Q9Y6N1 276 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 F5H768 121 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 CTSGP08311 255 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 MTURNQ8N3F0 131 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 CD5LO43866 347 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 AJUBAQ96IF1 538 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 C16orf54Q6UWD8 224 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 A0A087WWL8 130 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 Q8N8P6 123 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 ODF3BA8MYP8 253 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 K7EMI3 77 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 IGLV2-23P01705 113 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 SMKR1H3BMG3 65 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 M0R2P5 195 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 C1orf159Q96HA4 380 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 NAA38Q9BRA0 125 aaKnown RBP13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 ARFGEF3Q5TH69 2177 aa13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 ODF3L1Q8IXM7 274 aa13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 MYMXA0A1B0GTQ4 84 aa13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 A0A1B0GV72 72 aa13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 PSCAO43653 123 aa13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 LTAP01374 205 aa13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 C8orf49Q96NF6 230 aa13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 C20orf78Q9BR46 151 aa13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 COL5A1P20908 1838 aaPredicted RBP13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 C6orf226Q5I0X4 101 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms