RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 COMMD7Q86VX2 200 aa9.52□□□□□ -0.89
LIMS2-203ENST00000409254 BAGE2Q86Y30 109 aa9.52□□□□□ -0.89
LIMS2-203ENST00000409254 CSNK1G2-AS1Q8NCQ2 148 aa9.52□□□□□ -0.89
LIMS2-203ENST00000409254 LINC00479Q96M42 142 aa9.52□□□□□ -0.89
LIMS2-203ENST00000409254 NEU1Q99519 415 aa9.52□□□□□ -0.89
LIMS2-203ENST00000409254 NIPSNAP3BQ9BS92 247 aa9.52□□□□□ -0.89
LIMS2-203ENST00000409254 DERL1Q9BUN8 251 aa9.52□□□□□ -0.89
LIMS2-203ENST00000409254 GOLT1BQ9Y3E0 138 aa9.52□□□□□ -0.89
LIMS2-203ENST00000409254 TENM3Q9P273 2699 aa9.52□□□□□ -0.89
LIMS2-203ENST00000409254 STAB2Q8WWQ8 2551 aa9.52□□□□□ -0.89
LIMS2-203ENST00000409254 TRBV20OR9-2A0A075B6H5 130 aa9.51□□□□□ -0.89
LIMS2-203ENST00000409254 TRAV34A0A0B4J273 112 aa9.51□□□□□ -0.89
LIMS2-203ENST00000409254 TRAV21A0A0B4J279 112 aa9.51□□□□□ -0.89
LIMS2-203ENST00000409254 SMIM9A6NGZ8 99 aa9.51□□□□□ -0.89
LIMS2-203ENST00000409254 H7BYZ3 331 aa9.51□□□□□ -0.89
LIMS2-203ENST00000409254 M0R2Z0 102 aa9.51□□□□□ -0.89
LIMS2-203ENST00000409254 IGKV3-20P01619 116 aa9.51□□□□□ -0.89
LIMS2-203ENST00000409254 PFN1P07737 140 aaKnown RBP9.51□□□□□ -0.89
LIMS2-203ENST00000409254 GFI1BQ5VTD9 330 aa9.51□□□□□ -0.89
LIMS2-203ENST00000409254 ZNF705AQ6ZN79 300 aaPredicted RBP9.51□□□□□ -0.89
LIMS2-203ENST00000409254 TVP23CQ96ET8 276 aa9.51□□□□□ -0.89
LIMS2-203ENST00000409254 PYGO2Q9BRQ0 406 aa9.51□□□□□ -0.89
LIMS2-203ENST00000409254 ZNF727A8MUV8 499 aa9.5□□□□□ -0.89
LIMS2-203ENST00000409254 ZNF324O75467 553 aaPredicted RBP9.5□□□□□ -0.89
LIMS2-203ENST00000409254 NHLRC4P0CG21 123 aaPredicted RBP9.5□□□□□ -0.89
LIMS2-203ENST00000409254 DEFA6Q01524 100 aa9.5□□□□□ -0.89
LIMS2-203ENST00000409254 PNRC1Q12796 327 aaPredicted RBP9.5□□□□□ -0.89
LIMS2-203ENST00000409254 TDRG1Q3Y452 100 aa9.5□□□□□ -0.89
LIMS2-203ENST00000409254 FAM162BQ5T6X4 162 aa9.5□□□□□ -0.89
LIMS2-203ENST00000409254 RNF183Q96D59 192 aa9.5□□□□□ -0.89
LIMS2-203ENST00000409254 SPATA25Q9BR10 227 aa9.5□□□□□ -0.89
LIMS2-203ENST00000409254 TM2D3Q9BRN9 247 aa9.5□□□□□ -0.89
LIMS2-203ENST00000409254 DNAH9Q9NYC9 4486 aa9.49□□□□□ -0.89
LIMS2-203ENST00000409254 FABP5P3A8MUU1 101 aa9.49□□□□□ -0.89
LIMS2-203ENST00000409254 CXCL1P09341 107 aa9.49□□□□□ -0.89
LIMS2-203ENST00000409254 SFTA3P0C7M3 94 aa9.49□□□□□ -0.89
LIMS2-203ENST00000409254 SRSF3P84103 164 aaKnown RBP9.49□□□□□ -0.89
LIMS2-203ENST00000409254 ZNF674Q2M3X9 581 aa9.49□□□□□ -0.89
LIMS2-203ENST00000409254 KCNS1Q96KK3 526 aa9.49□□□□□ -0.89
LIMS2-203ENST00000409254 RCHY1Q96PM5 261 aa9.49□□□□□ -0.89
LIMS2-203ENST00000409254 XCL2Q9UBD3 114 aa9.49□□□□□ -0.89
LIMS2-203ENST00000409254 NAT8Q9UHE5 227 aa9.49□□□□□ -0.89
LIMS2-203ENST00000409254 TMEM218A2RU14 115 aa9.48□□□□□ -0.89
LIMS2-203ENST00000409254 C9JQL5 133 aa9.48□□□□□ -0.89
LIMS2-203ENST00000409254 GCGP01275 180 aa9.48□□□□□ -0.89
LIMS2-203ENST00000409254 IGLV2-8P01709 118 aa9.48□□□□□ -0.89
LIMS2-203ENST00000409254 PRB2P02812 416 aaPredicted RBP9.48□□□□□ -0.89
LIMS2-203ENST00000409254 DEFB121Q5J5C9 76 aa9.48□□□□□ -0.89
LIMS2-203ENST00000409254 ZC2HC1AQ96GY0 325 aa9.48□□□□□ -0.89
LIMS2-203ENST00000409254 SEC11CQ9BY50 192 aa9.48□□□□□ -0.89
LIMS2-203ENST00000409254 TP53TG3Q9ULZ0 132 aa9.48□□□□□ -0.89
LIMS2-203ENST00000409254 MIFP14174 115 aa9.47□□□□□ -0.89
LIMS2-203ENST00000409254 BTN1A1Q13410 526 aa9.47□□□□□ -0.89
LIMS2-203ENST00000409254 TMEM241Q24JQ0 296 aa9.47□□□□□ -0.89
LIMS2-203ENST00000409254 ANXA2RQ3ZCQ2 193 aa9.47□□□□□ -0.89
LIMS2-203ENST00000409254 PRR9Q5T870 116 aa9.47□□□□□ -0.89
LIMS2-203ENST00000409254 ZNF493Q6ZR52 646 aa9.47□□□□□ -0.89
LIMS2-203ENST00000409254 FAM231DQ6ZW35 169 aa9.47□□□□□ -0.89
LIMS2-203ENST00000409254 LINC01551Q86U37 167 aa9.47□□□□□ -0.89
LIMS2-203ENST00000409254 SGK494Q96LW2 274 aa9.47□□□□□ -0.89
LIMS2-203ENST00000409254 C8orf49Q96NF6 230 aa9.47□□□□□ -0.89
LIMS2-203ENST00000409254 ZMAT4Q9H898 229 aa9.47□□□□□ -0.89
LIMS2-203ENST00000409254 TRAV12-2A0A075B6T6 113 aa9.46□□□□□ -0.9
LIMS2-203ENST00000409254 TMEM189A5PLL7 270 aa9.46□□□□□ -0.9
LIMS2-203ENST00000409254 SPRY2O43597 315 aa9.46□□□□□ -0.9
LIMS2-203ENST00000409254 RNASE4P34096 147 aaKnown RBP9.46□□□□□ -0.9
LIMS2-203ENST00000409254 CEBPGP53567 150 aa9.46□□□□□ -0.9
LIMS2-203ENST00000409254 DEFB135Q30KP9 77 aa9.46□□□□□ -0.9
LIMS2-203ENST00000409254 LINC01559Q495D7 138 aa9.46□□□□□ -0.9
LIMS2-203ENST00000409254 DNLZQ5SXM8 178 aa9.46□□□□□ -0.9
LIMS2-203ENST00000409254 IBA57Q5T440 356 aaKnown RBP9.46□□□□□ -0.9
LIMS2-203ENST00000409254 C1orf158Q8N1D5 194 aa9.46□□□□□ -0.9
LIMS2-203ENST00000409254 TMEM208Q9BTX3 173 aa9.46□□□□□ -0.9
LIMS2-203ENST00000409254 TRGV11A0A075B6L2 103 aa9.45□□□□□ -0.9
LIMS2-203ENST00000409254 IGHV1OR15-1A0A075B7D0 117 aa9.45□□□□□ -0.9
LIMS2-203ENST00000409254 TRAV12-3A0A0B4J271 114 aa9.45□□□□□ -0.9
LIMS2-203ENST00000409254 C19orf71A6NCJ1 209 aa9.45□□□□□ -0.9
LIMS2-203ENST00000409254 KRBOX1C9JBD0 128 aa9.45□□□□□ -0.9
LIMS2-203ENST00000409254 CT83Q5H943 113 aa9.45□□□□□ -0.9
LIMS2-203ENST00000409254 C10orf91Q5T1B1 145 aa9.45□□□□□ -0.9
LIMS2-203ENST00000409254 FAM159AQ6UWV7 190 aa9.45□□□□□ -0.9
LIMS2-203ENST00000409254 SBSPONQ8IVN8 264 aa9.45□□□□□ -0.9
LIMS2-203ENST00000409254 OCC1Q8TAD7 63 aa9.45□□□□□ -0.9
LIMS2-203ENST00000409254 TMEM263Q8WUH6 116 aaKnown RBP9.45□□□□□ -0.9
LIMS2-203ENST00000409254 C16orf74Q96GX8 76 aa9.45□□□□□ -0.9
LIMS2-203ENST00000409254 C11orf68Q9H3H3 251 aaKnown RBP9.45□□□□□ -0.9
LIMS2-203ENST00000409254 SDF2L1Q9HCN8 221 aa9.45□□□□□ -0.9
LIMS2-203ENST00000409254 CARHSP1Q9Y2V2 147 aaKnown RBP9.45□□□□□ -0.9
LIMS2-203ENST00000409254 HUWE1Q7Z6Z7 4374 aaKnown RBP9.44□□□□□ -0.9
LIMS2-203ENST00000409254 TEX48A0A1B0GUV7 120 aa9.44□□□□□ -0.9
LIMS2-203ENST00000409254 XKRY2A2RUG3 117 aa9.44□□□□□ -0.9
LIMS2-203ENST00000409254 B4DEV8 164 aa9.44□□□□□ -0.9
LIMS2-203ENST00000409254 SH2D1AO60880 128 aa9.44□□□□□ -0.9
LIMS2-203ENST00000409254 RBMY1A1P0DJD3 496 aaKnown RBP9.44□□□□□ -0.9
LIMS2-203ENST00000409254 RBMY1CP0DJD4 496 aa9.44□□□□□ -0.9
LIMS2-203ENST00000409254 ZNF80P51504 273 aaPredicted RBP9.44□□□□□ -0.9
LIMS2-203ENST00000409254 FXYD7P58549 80 aa9.44□□□□□ -0.9
LIMS2-203ENST00000409254 RPS20P60866 119 aaKnown RBP9.44□□□□□ -0.9
LIMS2-203ENST00000409254 KIR3DS1Q14943 382 aa9.44□□□□□ -0.9
LIMS2-203ENST00000409254 RBMY1FQ15415 496 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms