RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 MUC21Q5SSG8 566 aa12.6□□□□□ -0.39
PIKFYVE-204ENST00000407449 CSPG4Q6UVK1 2322 aa12.6□□□□□ -0.39
PIKFYVE-204ENST00000407449 PRSS57Q6UWY2 283 aa12.6□□□□□ -0.39
PIKFYVE-204ENST00000407449 OR10J6PQ8NGY7 276 aa12.6□□□□□ -0.39
PIKFYVE-204ENST00000407449 D6R8Y8 96 aa12.59□□□□□ -0.39
PIKFYVE-204ENST00000407449 SSTP61278 116 aa12.59□□□□□ -0.39
PIKFYVE-204ENST00000407449 PMCHL1Q16048 86 aa12.59□□□□□ -0.39
PIKFYVE-204ENST00000407449 MRPL51Q4U2R6 128 aaKnown RBP12.59□□□□□ -0.39
PIKFYVE-204ENST00000407449 ORMDL3Q8N138 153 aa12.59□□□□□ -0.39
PIKFYVE-204ENST00000407449 TMEM191AQ9H0A3 160 aa12.59□□□□□ -0.39
PIKFYVE-204ENST00000407449 C11orf21Q9P2W6 132 aa12.59□□□□□ -0.39
PIKFYVE-204ENST00000407449 UFC1Q9Y3C8 167 aa12.59□□□□□ -0.39
PIKFYVE-204ENST00000407449 ZFHX3Q15911 3703 aa12.59□□□□□ -0.39
PIKFYVE-204ENST00000407449 CSN3P07498 182 aa12.59□□□□□ -0.39
PIKFYVE-204ENST00000407449 RPL11P62913 178 aaKnown RBP12.59□□□□□ -0.39
PIKFYVE-204ENST00000407449 KRTAP1-3Q8IUG1 177 aa12.59□□□□□ -0.39
PIKFYVE-204ENST00000407449 PRELID3AQ96N28 172 aa12.59□□□□□ -0.39
PIKFYVE-204ENST00000407449 ZNF702PQ9H963 129 aa12.59□□□□□ -0.39
PIKFYVE-204ENST00000407449 POLQO75417 2590 aa12.58□□□□□ -0.4
PIKFYVE-204ENST00000407449 LEPROTL1O95214 131 aa12.58□□□□□ -0.4
PIKFYVE-204ENST00000407449 FOXE3Q13461 319 aa12.58□□□□□ -0.4
PIKFYVE-204ENST00000407449 SAMD13Q5VXD3 122 aa12.58□□□□□ -0.4
PIKFYVE-204ENST00000407449 C10orf99Q6UWK7 81 aa12.58□□□□□ -0.4
PIKFYVE-204ENST00000407449 TMEM70Q9BUB7 260 aa12.58□□□□□ -0.4
PIKFYVE-204ENST00000407449 EPG5Q9HCE0 2579 aa12.58□□□□□ -0.4
PIKFYVE-204ENST00000407449 HOXA3O43365 443 aaPredicted RBP12.57□□□□□ -0.4
PIKFYVE-204ENST00000407449 FA2HQ7L5A8 372 aa12.57□□□□□ -0.4
PIKFYVE-204ENST00000407449 AP5S1Q9NUS5 200 aa12.57□□□□□ -0.4
PIKFYVE-204ENST00000407449 USP9YO00507 2555 aaPredicted RBP12.57□□□□□ -0.4
PIKFYVE-204ENST00000407449 RPLP1P05386 114 aaKnown RBP12.57□□□□□ -0.4
PIKFYVE-204ENST00000407449 ELANEP08246 267 aa12.57□□□□□ -0.4
PIKFYVE-204ENST00000407449 PRSS3P2Q8NHM4 247 aa12.57□□□□□ -0.4
PIKFYVE-204ENST00000407449 MYOZ3Q8TDC0 251 aa12.57□□□□□ -0.4
PIKFYVE-204ENST00000407449 MIEN1Q9BRT3 115 aa12.57□□□□□ -0.4
PIKFYVE-204ENST00000407449 PTPN13Q12923 2485 aa12.57□□□□□ -0.4
PIKFYVE-204ENST00000407449 MAP1AP78559 2803 aaPredicted RBP12.56□□□□□ -0.4
PIKFYVE-204ENST00000407449 SPATA45Q537H7 98 aa12.56□□□□□ -0.4
PIKFYVE-204ENST00000407449 PRR9Q5T870 116 aa12.56□□□□□ -0.4
PIKFYVE-204ENST00000407449 CRXO43186 299 aaPredicted RBP12.55□□□□□ -0.4
PIKFYVE-204ENST00000407449 LURAP1LQ8IV03 231 aa12.55□□□□□ -0.4
PIKFYVE-204ENST00000407449 ZFAND2AQ8N6M9 145 aa12.55□□□□□ -0.4
PIKFYVE-204ENST00000407449 OR8A1Q8NGG7 326 aa12.55□□□□□ -0.4
PIKFYVE-204ENST00000407449 MSRB1Q9NZV6 116 aa12.55□□□□□ -0.4
PIKFYVE-204ENST00000407449 HSPB8Q9UJY1 196 aa12.55□□□□□ -0.4
PIKFYVE-204ENST00000407449 TRBV7-9A0A0J9YWB2 115 aa12.55□□□□□ -0.4
PIKFYVE-204ENST00000407449 LGALS1P09382 135 aaKnown RBP12.55□□□□□ -0.4
PIKFYVE-204ENST00000407449 CKS2P33552 79 aa12.55□□□□□ -0.4
PIKFYVE-204ENST00000407449 LBHQ53QV2 105 aaPredicted RBP12.55□□□□□ -0.4
PIKFYVE-204ENST00000407449 RNF185Q96GF1 192 aa12.55□□□□□ -0.4
PIKFYVE-204ENST00000407449 FAM19A4Q96LR4 140 aa12.55□□□□□ -0.4
PIKFYVE-204ENST00000407449 SIGLEC8Q9NYZ4 499 aa12.55□□□□□ -0.4
PIKFYVE-204ENST00000407449 IGKV3-7A0A075B6H7 116 aa12.54□□□□□ -0.4
PIKFYVE-204ENST00000407449 PPBPP02775 128 aa12.54□□□□□ -0.4
PIKFYVE-204ENST00000407449 EDN2P20800 178 aa12.54□□□□□ -0.4
PIKFYVE-204ENST00000407449 ID1P41134 155 aa12.54□□□□□ -0.4
PIKFYVE-204ENST00000407449 LINC00173Q6ZV60 143 aa12.54□□□□□ -0.4
PIKFYVE-204ENST00000407449 TRAV21A0A0B4J279 112 aa12.53□□□□□ -0.4
PIKFYVE-204ENST00000407449 C20orf202A1L168 122 aa12.53□□□□□ -0.4
PIKFYVE-204ENST00000407449 SYS1-DBNDD2H3BUS1 97 aa12.53□□□□□ -0.4
PIKFYVE-204ENST00000407449 SNAI2O43623 268 aa12.53□□□□□ -0.4
PIKFYVE-204ENST00000407449 IFI27P40305 119 aaPredicted RBP12.53□□□□□ -0.4
PIKFYVE-204ENST00000407449 SPATA12Q7Z6I5 190 aa12.53□□□□□ -0.4
PIKFYVE-204ENST00000407449 RNF152Q8N8N0 203 aa12.53□□□□□ -0.4
PIKFYVE-204ENST00000407449 OR10AG1Q8NH19 301 aa12.53□□□□□ -0.4
PIKFYVE-204ENST00000407449 NAV2Q8IVL1 2488 aa12.53□□□□□ -0.4
PIKFYVE-204ENST00000407449 CACNG7P62955 275 aa12.53□□□□□ -0.4
PIKFYVE-204ENST00000407449 APRG1Q8IVJ8 170 aa12.53□□□□□ -0.4
PIKFYVE-204ENST00000407449 UBE2E2Q96LR5 201 aa12.53□□□□□ -0.4
PIKFYVE-204ENST00000407449 MAP1LC3CQ9BXW4 147 aa12.53□□□□□ -0.4
PIKFYVE-204ENST00000407449 LAMTOR2Q9Y2Q5 125 aa12.53□□□□□ -0.4
PIKFYVE-204ENST00000407449 CENPEQ02224 2701 aa12.52□□□□□ -0.41
PIKFYVE-204ENST00000407449 SMKR1H3BMG3 65 aa12.52□□□□□ -0.41
PIKFYVE-204ENST00000407449 NPYP01303 97 aa12.52□□□□□ -0.41
PIKFYVE-204ENST00000407449 DEFB1P60022 68 aa12.52□□□□□ -0.41
PIKFYVE-204ENST00000407449 ZNF705AQ6ZN79 300 aaPredicted RBP12.52□□□□□ -0.41
PIKFYVE-204ENST00000407449 Q6ZQT7 251 aa12.52□□□□□ -0.41
PIKFYVE-204ENST00000407449 ATOH7Q8N100 152 aa12.52□□□□□ -0.41
PIKFYVE-204ENST00000407449 Q8N2B8 174 aa12.52□□□□□ -0.41
PIKFYVE-204ENST00000407449 DCANP1Q8TF63 244 aa12.52□□□□□ -0.41
PIKFYVE-204ENST00000407449 C2orf88Q9BSF0 95 aa12.52□□□□□ -0.41
PIKFYVE-204ENST00000407449 IGHV4-4A0A075B6R2 117 aa12.51□□□□□ -0.41
PIKFYVE-204ENST00000407449 TRAV9-2A0A087WT02 112 aa12.51□□□□□ -0.41
PIKFYVE-204ENST00000407449 LOC389332A0A1B0GUA5 103 aa12.51□□□□□ -0.41
PIKFYVE-204ENST00000407449 LGALS9O00182 355 aa12.51□□□□□ -0.41
PIKFYVE-204ENST00000407449 NCR2O95944 276 aa12.51□□□□□ -0.41
PIKFYVE-204ENST00000407449 PET117Q6UWS5 81 aa12.51□□□□□ -0.41
PIKFYVE-204ENST00000407449 MRPL52Q86TS9 123 aaKnown RBP12.51□□□□□ -0.41
PIKFYVE-204ENST00000407449 KLHDC1Q8N7A1 406 aa12.51□□□□□ -0.41
PIKFYVE-204ENST00000407449 F6UB75 175 aa12.51□□□□□ -0.41
PIKFYVE-204ENST00000407449 SRD5A1P18405 259 aa12.51□□□□□ -0.41
PIKFYVE-204ENST00000407449 SMIM15Q7Z3B0 74 aa12.51□□□□□ -0.41
PIKFYVE-204ENST00000407449 TEX29Q8N6K0 151 aa12.51□□□□□ -0.41
PIKFYVE-204ENST00000407449 ABCA12Q86UK0 2595 aa12.5□□□□□ -0.41
PIKFYVE-204ENST00000407449 IGHV4OR15-8A0A075B7B6 117 aa12.5□□□□□ -0.41
PIKFYVE-204ENST00000407449 A0A087WW49 117 aa12.5□□□□□ -0.41
PIKFYVE-204ENST00000407449 J3KRW8 73 aa12.5□□□□□ -0.41
PIKFYVE-204ENST00000407449 EREGO14944 169 aa12.5□□□□□ -0.41
PIKFYVE-204ENST00000407449 TCF21O43680 179 aa12.5□□□□□ -0.41
PIKFYVE-204ENST00000407449 MAP1LC3AQ9H492 121 aa12.5□□□□□ -0.41
PIKFYVE-204ENST00000407449 ZMAT5Q9UDW3 170 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms