RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 CT45A10P0DMU9 189 aa8.39□□□□□ -1.07
APOBEC3B-204ENST00000407298 GCSHP23434 173 aa8.39□□□□□ -1.07
APOBEC3B-204ENST00000407298 KRTAP10-1P60331 282 aa8.39□□□□□ -1.07
APOBEC3B-204ENST00000407298 PDE6HQ13956 83 aa8.39□□□□□ -1.07
APOBEC3B-204ENST00000407298 Q5BKY6 102 aa8.39□□□□□ -1.07
APOBEC3B-204ENST00000407298 Q6ZTI0 123 aa8.39□□□□□ -1.07
APOBEC3B-204ENST00000407298 EXOC3-AS1Q8N2X6 119 aa8.39□□□□□ -1.07
APOBEC3B-204ENST00000407298 FXYD5Q96DB9 178 aa8.39□□□□□ -1.07
APOBEC3B-204ENST00000407298 MRPL53Q96EL3 112 aaKnown RBP8.39□□□□□ -1.07
APOBEC3B-204ENST00000407298 MRPL32Q9BYC8 188 aaKnown RBP8.39□□□□□ -1.07
APOBEC3B-204ENST00000407298 KCNIP2Q9NS61 270 aa8.39□□□□□ -1.07
APOBEC3B-204ENST00000407298 FUT9Q9Y231 359 aa8.39□□□□□ -1.07
APOBEC3B-204ENST00000407298 FAT1Q14517 4588 aa8.39□□□□□ -1.07
APOBEC3B-204ENST00000407298 TRAV12-3A0A0B4J271 114 aa8.38□□□□□ -1.07
APOBEC3B-204ENST00000407298 SMR3BP02814 79 aaPredicted RBP8.38□□□□□ -1.07
APOBEC3B-204ENST00000407298 FUSP35637 526 aaKnown RBP eCLIP8.38□□□□□ -1.07
APOBEC3B-204ENST00000407298 Q6ZSN1 163 aa8.38□□□□□ -1.07
APOBEC3B-204ENST00000407298 BLNKQ8WV28 456 aa8.38□□□□□ -1.07
APOBEC3B-204ENST00000407298 PHYHIPLQ96FC7 376 aa8.38□□□□□ -1.07
APOBEC3B-204ENST00000407298 TRGV1A0A0A0MS02 117 aa8.37□□□□□ -1.07
APOBEC3B-204ENST00000407298 C17orf112F2Z3M2 114 aa8.37□□□□□ -1.07
APOBEC3B-204ENST00000407298 ZNF324O75467 553 aaPredicted RBP8.37□□□□□ -1.07
APOBEC3B-204ENST00000407298 EIF3GO75821 320 aaKnown RBP eCLIP8.37□□□□□ -1.07
APOBEC3B-204ENST00000407298 OR10J4P0C629 311 aa8.37□□□□□ -1.07
APOBEC3B-204ENST00000407298 MRPL23Q16540 153 aaKnown RBP8.37□□□□□ -1.07
APOBEC3B-204ENST00000407298 FFAR4Q5NUL3 377 aa8.37□□□□□ -1.07
APOBEC3B-204ENST00000407298 FAM19A4Q96LR4 140 aa8.37□□□□□ -1.07
APOBEC3B-204ENST00000407298 MED28Q9H204 178 aa8.37□□□□□ -1.07
APOBEC3B-204ENST00000407298 MDFICQ9P1T7 246 aa8.37□□□□□ -1.07
APOBEC3B-204ENST00000407298 LY96Q9Y6Y9 160 aa8.37□□□□□ -1.07
APOBEC3B-204ENST00000407298 G3V3Q6 166 aa8.36□□□□□ -1.07
APOBEC3B-204ENST00000407298 J3KRW8 73 aa8.36□□□□□ -1.07
APOBEC3B-204ENST00000407298 SLC25A5P05141 298 aaKnown RBP8.36□□□□□ -1.07
APOBEC3B-204ENST00000407298 EVI2AP22794 236 aa8.36□□□□□ -1.07
APOBEC3B-204ENST00000407298 ERCC8Q13216 396 aa8.36□□□□□ -1.07
APOBEC3B-204ENST00000407298 AQP10Q96PS8 301 aa8.36□□□□□ -1.07
APOBEC3B-204ENST00000407298 TMEM70Q9BUB7 260 aa8.36□□□□□ -1.07
APOBEC3B-204ENST00000407298 PAXXQ9BUH6 204 aa8.36□□□□□ -1.07
APOBEC3B-204ENST00000407298 OR51M1Q9H341 326 aa8.36□□□□□ -1.07
APOBEC3B-204ENST00000407298 GSN-AS1Q9NRJ2 163 aa8.36□□□□□ -1.07
APOBEC3B-204ENST00000407298 MSRB1Q9NZV6 116 aa8.36□□□□□ -1.07
APOBEC3B-204ENST00000407298 PRO0255Q9UI72 69 aa8.36□□□□□ -1.07
APOBEC3B-204ENST00000407298 TIMM9Q9Y5J7 89 aa8.36□□□□□ -1.07
APOBEC3B-204ENST00000407298 TNFRSF18Q9Y5U5 241 aa8.36□□□□□ -1.07
APOBEC3B-204ENST00000407298 IGKV2-40A0A087WW87 121 aaPredicted RBP8.35□□□□□ -1.07
APOBEC3B-204ENST00000407298 KLLNB2CW77 178 aa8.35□□□□□ -1.07
APOBEC3B-204ENST00000407298 IGKV2D-40P01614 121 aaPredicted RBP8.35□□□□□ -1.07
APOBEC3B-204ENST00000407298 GIPP09681 153 aaPredicted RBP8.35□□□□□ -1.07
APOBEC3B-204ENST00000407298 NBEAP1P0C6P0 100 aa8.35□□□□□ -1.07
APOBEC3B-204ENST00000407298 DNAH10OSP0CZ25 163 aa8.35□□□□□ -1.07
APOBEC3B-204ENST00000407298 RAB2AP61019 212 aa8.35□□□□□ -1.07
APOBEC3B-204ENST00000407298 ANXA2RQ3ZCQ2 193 aa8.35□□□□□ -1.07
APOBEC3B-204ENST00000407298 LYPD5Q6UWN5 251 aa8.35□□□□□ -1.07
APOBEC3B-204ENST00000407298 NEGR1Q7Z3B1 354 aa8.35□□□□□ -1.07
APOBEC3B-204ENST00000407298 EIF4E3Q8N5X7 224 aaKnown RBP8.35□□□□□ -1.07
APOBEC3B-204ENST00000407298 ST6GAL2Q96JF0 529 aa8.35□□□□□ -1.07
APOBEC3B-204ENST00000407298 LINC00467Q9BRT7 94 aa8.35□□□□□ -1.07
APOBEC3B-204ENST00000407298 AGPAT4-IT1Q9H0P7 198 aa8.35□□□□□ -1.07
APOBEC3B-204ENST00000407298 PRELID1Q9Y255 219 aa8.35□□□□□ -1.07
APOBEC3B-204ENST00000407298 C7orf71A4D174 169 aa8.34□□□□□ -1.07
APOBEC3B-204ENST00000407298 RNF222A6NCQ9 220 aa8.34□□□□□ -1.07
APOBEC3B-204ENST00000407298 OR7C2O60412 319 aa8.34□□□□□ -1.07
APOBEC3B-204ENST00000407298 SPINK4O60575 86 aa8.34□□□□□ -1.07
APOBEC3B-204ENST00000407298 UBE2L3P68036 154 aaKnown RBP8.34□□□□□ -1.07
APOBEC3B-204ENST00000407298 RGS21Q2M5E4 152 aa8.34□□□□□ -1.07
APOBEC3B-204ENST00000407298 PRR9Q5T870 116 aa8.34□□□□□ -1.07
APOBEC3B-204ENST00000407298 FAM122CQ6P4D5 195 aa8.34□□□□□ -1.07
APOBEC3B-204ENST00000407298 C9orf47Q6ZRZ4 202 aa8.34□□□□□ -1.07
APOBEC3B-204ENST00000407298 SCGB1C1Q8TD33 95 aa8.34□□□□□ -1.07
APOBEC3B-204ENST00000407298 NTN5Q8WTR8 489 aaPredicted RBP8.34□□□□□ -1.07
APOBEC3B-204ENST00000407298 VGLL1Q99990 258 aa8.34□□□□□ -1.07
APOBEC3B-204ENST00000407298 HHLA3Q9XRX5 114 aa8.34□□□□□ -1.07
APOBEC3B-204ENST00000407298 CRISP2P16562 243 aa8.33□□□□□ -1.08
APOBEC3B-204ENST00000407298 TCL1AP56279 114 aa8.33□□□□□ -1.08
APOBEC3B-204ENST00000407298 CD300CQ08708 224 aa8.33□□□□□ -1.08
APOBEC3B-204ENST00000407298 KHDC3LQ587J8 217 aa8.33□□□□□ -1.08
APOBEC3B-204ENST00000407298 IBA57Q5T440 356 aaKnown RBP8.33□□□□□ -1.08
APOBEC3B-204ENST00000407298 C10orf126Q8N4M7 172 aa8.33□□□□□ -1.08
APOBEC3B-204ENST00000407298 ZFAND2AQ8N6M9 145 aa8.33□□□□□ -1.08
APOBEC3B-204ENST00000407298 C11orf72Q8NBR9 251 aa8.33□□□□□ -1.08
APOBEC3B-204ENST00000407298 OR2G3Q8NGZ4 309 aa8.33□□□□□ -1.08
APOBEC3B-204ENST00000407298 ASB13Q8WXK3 278 aa8.33□□□□□ -1.08
APOBEC3B-204ENST00000407298 LINC00477Q96M19 166 aa8.33□□□□□ -1.08
APOBEC3B-204ENST00000407298 AAMDCQ9H7C9 122 aa8.33□□□□□ -1.08
APOBEC3B-204ENST00000407298 IGLV5-52A0A0A0MRZ9 124 aa8.32□□□□□ -1.08
APOBEC3B-204ENST00000407298 CRYBA4P53673 196 aa8.32□□□□□ -1.08
APOBEC3B-204ENST00000407298 BTN1A1Q13410 526 aa8.32□□□□□ -1.08
APOBEC3B-204ENST00000407298 Q6ZQT7 251 aa8.32□□□□□ -1.08
APOBEC3B-204ENST00000407298 HSD17B11Q8NBQ5 300 aa8.32□□□□□ -1.08
APOBEC3B-204ENST00000407298 Q8TAT8 98 aa8.32□□□□□ -1.08
APOBEC3B-204ENST00000407298 TNFSF18Q9UNG2 199 aa8.32□□□□□ -1.08
APOBEC3B-204ENST00000407298 RGS13O14921 159 aa8.31□□□□□ -1.08
APOBEC3B-204ENST00000407298 PSCAO43653 123 aa8.31□□□□□ -1.08
APOBEC3B-204ENST00000407298 IGHV3-53P01767 116 aa8.31□□□□□ -1.08
APOBEC3B-204ENST00000407298 PLA2G1BP04054 148 aaKnown RBP8.31□□□□□ -1.08
APOBEC3B-204ENST00000407298 NMBP08949 121 aa8.31□□□□□ -1.08
APOBEC3B-204ENST00000407298 ATP6V0CP27449 155 aa8.31□□□□□ -1.08
APOBEC3B-204ENST00000407298 SRIP30626 198 aa8.31□□□□□ -1.08
APOBEC3B-204ENST00000407298 RANP62826 216 aaKnown RBP8.31□□□□□ -1.08
APOBEC3B-204ENST00000407298 ZNF266Q14584 549 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms