RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 LENEPQ9Y5L5 61 aa8.25□□□□□ -1.09
CLIP4-204ENST00000404424 IGHV3-66A0A0C4DH42 116 aa8.24□□□□□ -1.09
CLIP4-204ENST00000404424 IGHV7-4-1A0A0J9YVY3 117 aa8.24□□□□□ -1.09
CLIP4-204ENST00000404424 G3V318 75 aa8.24□□□□□ -1.09
CLIP4-204ENST00000404424 IGKCP01834 107 aa8.24□□□□□ -1.09
CLIP4-204ENST00000404424 PPIFP30405 207 aaKnown RBP8.24□□□□□ -1.09
CLIP4-204ENST00000404424 ATP5G2Q06055 141 aa8.24□□□□□ -1.09
CLIP4-204ENST00000404424 WFDC3Q8IUB2 231 aa8.24□□□□□ -1.09
CLIP4-204ENST00000404424 TMEM158Q8WZ71 300 aa8.24□□□□□ -1.09
CLIP4-204ENST00000404424 C11orf21Q9P2W6 132 aa8.24□□□□□ -1.09
CLIP4-204ENST00000404424 HHLA3Q9XRX5 114 aa8.24□□□□□ -1.09
CLIP4-204ENST00000404424 UFSP1Q6NVU6 142 aa8.24□□□□□ -1.09
CLIP4-204ENST00000404424 C5orf56Q8N8D9 126 aa8.24□□□□□ -1.09
CLIP4-204ENST00000404424 A0A1W2PPR1 153 aa8.23□□□□□ -1.09
CLIP4-204ENST00000404424 NPFFO15130 113 aa8.23□□□□□ -1.09
CLIP4-204ENST00000404424 HLA-DRB4P13762 266 aa8.23□□□□□ -1.09
CLIP4-204ENST00000404424 LMO4P61968 165 aa8.23□□□□□ -1.09
CLIP4-204ENST00000404424 HLA-DRB4X5D2U9 266 aa8.23□□□□□ -1.09
CLIP4-204ENST00000404424 FAM223BA6NKX1 122 aa8.23□□□□□ -1.09
CLIP4-204ENST00000404424 K7ERU9 68 aa8.23□□□□□ -1.09
CLIP4-204ENST00000404424 DPM2O94777 84 aa8.23□□□□□ -1.09
CLIP4-204ENST00000404424 GATA1P15976 413 aaPredicted RBP8.23□□□□□ -1.09
CLIP4-204ENST00000404424 LAGE3Q14657 143 aa8.23□□□□□ -1.09
CLIP4-204ENST00000404424 C9orf139Q6ZV77 190 aa8.23□□□□□ -1.09
CLIP4-204ENST00000404424 FAM223AQ8IWN6 122 aa8.23□□□□□ -1.09
CLIP4-204ENST00000404424 MYOZ3Q8TDC0 251 aa8.23□□□□□ -1.09
CLIP4-204ENST00000404424 PTPRZ1P23471 2315 aaPredicted RBP8.22□□□□□ -1.09
CLIP4-204ENST00000404424 IGHV3OR16-13A0A075B7E8 117 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 IGHV3-74A0A0B4J1X5 117 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 A0A0G2JLM5 398 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 LINC01548A6NM66 108 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 TRGV3P03979 118 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 SMIM17P0DL12 118 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 CRIP2P52943 208 aaPredicted RBP8.22□□□□□ -1.09
CLIP4-204ENST00000404424 TCTAP57738 103 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 RNF151Q2KHN1 245 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 SPANXN1Q5VSR9 72 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 NRACQ8N912 160 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 C16orf92Q96LL3 132 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 FOXC2Q99958 501 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 RAXQ9Y2V3 346 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 H3BUT2 72 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 K7EP34 96 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 C21orf62-AS1Q17RA5 79 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 UBTD1Q9HAC8 227 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 MOB4Q9Y3A3 225 aa8.22□□□□□ -1.09
CLIP4-204ENST00000404424 SRSF1Q07955 248 aaKnown RBP eCLIP8.21□□□□□ -1.09
CLIP4-204ENST00000404424 GLMPQ8WWB7 406 aa8.21□□□□□ -1.09
CLIP4-204ENST00000404424 MRAP2Q96G30 205 aa8.21□□□□□ -1.09
CLIP4-204ENST00000404424 BPESC1Q9GZL8 116 aa8.21□□□□□ -1.09
CLIP4-204ENST00000404424 SPTBN2O15020 2390 aa8.21□□□□□ -1.1
CLIP4-204ENST00000404424 WNK2Q9Y3S1 2297 aa8.21□□□□□ -1.1
CLIP4-204ENST00000404424 TRAV41A0A0B4J266 112 aa8.21□□□□□ -1.1
CLIP4-204ENST00000404424 ZNF207O43670 478 aaKnown RBP8.21□□□□□ -1.1
CLIP4-204ENST00000404424 SMIM13P0DJ93 91 aa8.21□□□□□ -1.1
CLIP4-204ENST00000404424 C19orf54Q5BKX5 351 aa8.21□□□□□ -1.1
CLIP4-204ENST00000404424 OR5A1Q8NGJ0 315 aa8.21□□□□□ -1.1
CLIP4-204ENST00000404424 LINC00477Q96M19 166 aa8.21□□□□□ -1.1
CLIP4-204ENST00000404424 JMJD8Q96S16 334 aa8.21□□□□□ -1.1
CLIP4-204ENST00000404424 UFC1Q9Y3C8 167 aa8.21□□□□□ -1.1
CLIP4-204ENST00000404424 MUC6Q6W4X9 2439 aa8.2□□□□□ -1.1
CLIP4-204ENST00000404424 IGKV2D-26A0A0A0MRZ7 120 aa8.2□□□□□ -1.1
CLIP4-204ENST00000404424 IGHV3-49A0A0A0MS15 119 aa8.2□□□□□ -1.1
CLIP4-204ENST00000404424 TMEM8BA6NDV4 472 aa8.2□□□□□ -1.1
CLIP4-204ENST00000404424 ZC2HC1BQ5TFG8 222 aa8.2□□□□□ -1.1
CLIP4-204ENST00000404424 ITLN2Q8WWU7 325 aaPredicted RBP8.2□□□□□ -1.1
CLIP4-204ENST00000404424 VPS25Q9BRG1 176 aa8.2□□□□□ -1.1
CLIP4-204ENST00000404424 A0A1W2PPM0 123 aa8.2□□□□□ -1.1
CLIP4-204ENST00000404424 A0A087WX48 190 aa8.19□□□□□ -1.1
CLIP4-204ENST00000404424 CHAC1Q9BUX1 264 aa8.19□□□□□ -1.1
CLIP4-204ENST00000404424 TRBV25-1A0A075B6N4 114 aa8.19□□□□□ -1.1
CLIP4-204ENST00000404424 TRAV21A0A0B4J279 112 aa8.19□□□□□ -1.1
CLIP4-204ENST00000404424 TRAV40A0A0B4J280 105 aa8.19□□□□□ -1.1
CLIP4-204ENST00000404424 K7EMI3 77 aa8.19□□□□□ -1.1
CLIP4-204ENST00000404424 NDUFA4O00483 81 aa8.19□□□□□ -1.1
CLIP4-204ENST00000404424 OVOL1O14753 267 aa8.19□□□□□ -1.1
CLIP4-204ENST00000404424 ARL3P36405 182 aa8.19□□□□□ -1.1
CLIP4-204ENST00000404424 GTSCR1Q86UQ5 136 aa8.19□□□□□ -1.1
CLIP4-204ENST00000404424 RAB37Q96AX2 223 aa8.19□□□□□ -1.1
CLIP4-204ENST00000404424 TMEM160Q9NX00 188 aa8.19□□□□□ -1.1
CLIP4-204ENST00000404424 CSMD1Q96PZ7 3565 aa8.18□□□□□ -1.1
CLIP4-204ENST00000404424 SPTA1P02549 2419 aa8.18□□□□□ -1.1
CLIP4-204ENST00000404424 TRAV12-1A0A0B4J245 112 aa8.18□□□□□ -1.1
CLIP4-204ENST00000404424 TRAV26-2A0A0B4J265 109 aa8.18□□□□□ -1.1
CLIP4-204ENST00000404424 H3BVH4 76 aa8.18□□□□□ -1.1
CLIP4-204ENST00000404424 BRI3O95415 125 aa8.18□□□□□ -1.1
CLIP4-204ENST00000404424 FABP2P12104 132 aa8.18□□□□□ -1.1
CLIP4-204ENST00000404424 GCSHP23434 173 aa8.18□□□□□ -1.1
CLIP4-204ENST00000404424 PLNP26678 52 aa8.18□□□□□ -1.1
CLIP4-204ENST00000404424 ORMDL2Q53FV1 153 aa8.18□□□□□ -1.1
CLIP4-204ENST00000404424 OR10J6PQ8NGY7 276 aa8.18□□□□□ -1.1
CLIP4-204ENST00000404424 SMIM2Q9BVW6 85 aa8.18□□□□□ -1.1
CLIP4-204ENST00000404424 MRPL35Q9NZE8 188 aaKnown RBP8.18□□□□□ -1.1
CLIP4-204ENST00000404424 TACC2O95359 2948 aa8.18□□□□□ -1.1
CLIP4-204ENST00000404424 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.18□□□□□ -1.1
CLIP4-204ENST00000404424 C20orf78Q9BR46 151 aa8.18□□□□□ -1.1
CLIP4-204ENST00000404424 TM2D2Q9BX73 214 aa8.18□□□□□ -1.1
CLIP4-204ENST00000404424 SPCS1Q9Y6A9 102 aa8.18□□□□□ -1.1
CLIP4-204ENST00000404424 H3BUA1 57 aa8.17□□□□□ -1.1
CLIP4-204ENST00000404424 MED14OSP0DP75 135 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms