RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 ARL17AQ8IVW1 177 aa7.43□□□□□ -1.22
SMC1B-202ENST00000404354 PTH2Q96A98 100 aa7.43□□□□□ -1.22
SMC1B-202ENST00000404354 C21orf62Q9NYP8 219 aa7.43□□□□□ -1.22
SMC1B-202ENST00000404354 SMAD5-AS1Q9Y6J3 95 aa7.43□□□□□ -1.22
SMC1B-202ENST00000404354 U3KQK5 164 aa7.43□□□□□ -1.22
SMC1B-202ENST00000404354 MFAP4P55083 255 aa7.42□□□□□ -1.22
SMC1B-202ENST00000404354 ECSCRQ19T08 205 aa7.42□□□□□ -1.22
SMC1B-202ENST00000404354 C12orf74Q32Q52 190 aa7.42□□□□□ -1.22
SMC1B-202ENST00000404354 ZNF575Q86XF7 245 aa7.42□□□□□ -1.22
SMC1B-202ENST00000404354 FANCD2OSQ96PS1 177 aa7.42□□□□□ -1.22
SMC1B-202ENST00000404354 C11orf21Q9P2W6 132 aa7.42□□□□□ -1.22
SMC1B-202ENST00000404354 DOPEY2Q9Y3R5 2298 aa7.42□□□□□ -1.22
SMC1B-202ENST00000404354 NBR2O15453 112 aa7.42□□□□□ -1.22
SMC1B-202ENST00000404354 MYOZ3Q8TDC0 251 aa7.42□□□□□ -1.22
SMC1B-202ENST00000404354 PVRIGQ6DKI7 326 aa7.42□□□□□ -1.22
SMC1B-202ENST00000404354 SPANXB1Q9NS25 103 aaPredicted RBP7.42□□□□□ -1.22
SMC1B-202ENST00000404354 FABP5P3A8MUU1 101 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 M0R381 172 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 SIVA1O15304 175 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 IGHG4P01861 327 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 C3orf36Q3SXR2 165 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 SPANXN1Q5VSR9 72 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 CCDC144NLQ6NUI1 221 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 NUP37Q8NFH4 326 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 PHLDA1Q8WV24 401 aaPredicted RBP7.41□□□□□ -1.22
SMC1B-202ENST00000404354 LINC00527Q9UJ94 153 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 LINC01548A6NM66 108 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 APOMO95445 188 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 IGF1P05019 195 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 BMI1P35226 326 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 CD300EQ496F6 205 aaPredicted RBP7.41□□□□□ -1.22
SMC1B-202ENST00000404354 DPF1Q92782 380 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 VKORC1Q9BQB6 163 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 H3BVH4 76 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 TNFRSF13BO14836 293 aaPredicted RBP7.41□□□□□ -1.22
SMC1B-202ENST00000404354 RPL7P18124 248 aaKnown RBP7.41□□□□□ -1.22
SMC1B-202ENST00000404354 CEACAM3P40198 252 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 GAGE13Q4V321 117 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 FOXI2Q6ZQN5 318 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 ASCL5Q7RTU5 278 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 TTC9CQ8N5M4 171 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 ZNF292O60281 2723 aa7.41□□□□□ -1.22
SMC1B-202ENST00000404354 IGKV3D-20A0A0C4DH25 116 aa7.4□□□□□ -1.22
SMC1B-202ENST00000404354 F8W735 103 aaPredicted RBP7.4□□□□□ -1.22
SMC1B-202ENST00000404354 IGLC6P0CF74 106 aa7.4□□□□□ -1.22
SMC1B-202ENST00000404354 GRNP28799 593 aaKnown RBP7.4□□□□□ -1.22
SMC1B-202ENST00000404354 LYPD1Q8N2G4 141 aa7.4□□□□□ -1.22
SMC1B-202ENST00000404354 KLHL30-AS1Q8NEE0 82 aa7.4□□□□□ -1.22
SMC1B-202ENST00000404354 GLMPQ8WWB7 406 aa7.4□□□□□ -1.22
SMC1B-202ENST00000404354 VSTM5A8MXK1 200 aa7.4□□□□□ -1.22
SMC1B-202ENST00000404354 RAB9AP51151 201 aa7.4□□□□□ -1.22
SMC1B-202ENST00000404354 ZNF502Q8TBZ5 544 aa7.4□□□□□ -1.22
SMC1B-202ENST00000404354 CLEC3BP05452 202 aa7.4□□□□□ -1.23
SMC1B-202ENST00000404354 CTSGP08311 255 aa7.4□□□□□ -1.23
SMC1B-202ENST00000404354 HLA-DRB4P13762 266 aa7.4□□□□□ -1.23
SMC1B-202ENST00000404354 SCGB1D4Q6XE38 83 aa7.4□□□□□ -1.23
SMC1B-202ENST00000404354 FAM57AQ8TBR7 257 aa7.4□□□□□ -1.23
SMC1B-202ENST00000404354 HLA-DRB4X5D2U9 266 aa7.4□□□□□ -1.23
SMC1B-202ENST00000404354 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.39□□□□□ -1.23
SMC1B-202ENST00000404354 MRPL16Q9NX20 251 aaKnown RBP7.39□□□□□ -1.23
SMC1B-202ENST00000404354 PGPEP1Q9NXJ5 209 aa7.39□□□□□ -1.23
SMC1B-202ENST00000404354 E9PLD3 99 aa7.39□□□□□ -1.23
SMC1B-202ENST00000404354 PSMB2P49721 201 aa7.39□□□□□ -1.23
SMC1B-202ENST00000404354 ZFP2Q6ZN57 461 aa7.39□□□□□ -1.23
SMC1B-202ENST00000404354 GATD1Q8NB37 220 aa7.39□□□□□ -1.23
SMC1B-202ENST00000404354 AGPAT4-IT1Q9H0P7 198 aa7.39□□□□□ -1.23
SMC1B-202ENST00000404354 NXT2Q9NPJ8 142 aaKnown RBP7.39□□□□□ -1.23
SMC1B-202ENST00000404354 DPM3Q9P2X0 92 aa7.39□□□□□ -1.23
SMC1B-202ENST00000404354 CSPG4Q6UVK1 2322 aa7.39□□□□□ -1.23
SMC1B-202ENST00000404354 FAM90A27PA6NNH2 459 aa7.39□□□□□ -1.23
SMC1B-202ENST00000404354 SHISA9B4DS77 424 aa7.39□□□□□ -1.23
SMC1B-202ENST00000404354 CEACAM4O75871 244 aa7.39□□□□□ -1.23
SMC1B-202ENST00000404354 MGPP08493 103 aa7.39□□□□□ -1.23
SMC1B-202ENST00000404354 CKS1BP61024 79 aa7.39□□□□□ -1.23
SMC1B-202ENST00000404354 SRSF9Q13242 221 aaKnown RBP eCLIP7.39□□□□□ -1.23
SMC1B-202ENST00000404354 CLEC19AQ6UXS0 136 aa7.39□□□□□ -1.23
SMC1B-202ENST00000404354 RPL39LQ96EH5 51 aaKnown RBP7.39□□□□□ -1.23
SMC1B-202ENST00000404354 PTPRQQ9UMZ3 2332 aa7.39□□□□□ -1.23
SMC1B-202ENST00000404354 C5orf64Q2M2E5 130 aa7.38□□□□□ -1.23
SMC1B-202ENST00000404354 LINC01549A6NIU2 74 aa7.38□□□□□ -1.23
SMC1B-202ENST00000404354 G3V318 75 aa7.38□□□□□ -1.23
SMC1B-202ENST00000404354 J3QR89 54 aa7.38□□□□□ -1.23
SMC1B-202ENST00000404354 LAGE3Q14657 143 aa7.38□□□□□ -1.23
SMC1B-202ENST00000404354 C15orf32Q32M92 178 aa7.38□□□□□ -1.23
SMC1B-202ENST00000404354 Q6ZS92 163 aa7.38□□□□□ -1.23
SMC1B-202ENST00000404354 SYT8Q8NBV8 401 aa7.38□□□□□ -1.23
SMC1B-202ENST00000404354 TRBV6-1A0A0K0K1D8 114 aa7.38□□□□□ -1.23
SMC1B-202ENST00000404354 OR11H12B2RN74 326 aa7.38□□□□□ -1.23
SMC1B-202ENST00000404354 H7C2G1 150 aa7.38□□□□□ -1.23
SMC1B-202ENST00000404354 NDUFS8O00217 210 aa7.38□□□□□ -1.23
SMC1B-202ENST00000404354 C14orf178Q8N769 122 aaPredicted RBP7.38□□□□□ -1.23
SMC1B-202ENST00000404354 OR11H1Q8NG94 326 aa7.38□□□□□ -1.23
SMC1B-202ENST00000404354 OR11H2Q8NH07 326 aa7.38□□□□□ -1.23
SMC1B-202ENST00000404354 SRSF8Q9BRL6 282 aaKnown RBP7.38□□□□□ -1.23
SMC1B-202ENST00000404354 IGLV11-55A0A075B6I3 123 aa7.37□□□□□ -1.23
SMC1B-202ENST00000404354 TRAV26-1A0A087WT03 109 aa7.37□□□□□ -1.23
SMC1B-202ENST00000404354 SCGB3A1Q96QR1 104 aa7.37□□□□□ -1.23
SMC1B-202ENST00000404354 ATP6V0BQ99437 205 aa7.37□□□□□ -1.23
SMC1B-202ENST00000404354 CHTOPQ9Y3Y2 248 aaKnown RBP7.37□□□□□ -1.23
SMC1B-202ENST00000404354 ARL3P36405 182 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms