RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 IGHV3-33P01772 117 aa6.03□□□□□ -1.44
NUP43-204ENST00000403890 SFTA3P0C7M3 94 aa6.03□□□□□ -1.44
NUP43-204ENST00000403890 IGHV3-30-3P0DP02 117 aa6.03□□□□□ -1.44
NUP43-204ENST00000403890 IGHV3-30-5P0DP03 117 aa6.03□□□□□ -1.44
NUP43-204ENST00000403890 PPT1P50897 306 aa6.03□□□□□ -1.44
NUP43-204ENST00000403890 POLR2GP62487 172 aaKnown RBP eCLIP6.03□□□□□ -1.44
NUP43-204ENST00000403890 PPP1R1AQ13522 171 aa6.03□□□□□ -1.44
NUP43-204ENST00000403890 C9orf47Q6ZRZ4 202 aa6.03□□□□□ -1.44
NUP43-204ENST00000403890 LINC00305Q7Z4B0 112 aa6.03□□□□□ -1.44
NUP43-204ENST00000403890 C12orf45Q8N5I9 185 aaPredicted RBP6.03□□□□□ -1.44
NUP43-204ENST00000403890 Q8N976 141 aa6.03□□□□□ -1.44
NUP43-204ENST00000403890 BAALCQ8WXS3 180 aa6.03□□□□□ -1.44
NUP43-204ENST00000403890 SOSTQ9BQB4 213 aa6.03□□□□□ -1.44
NUP43-204ENST00000403890 PXMP4Q9Y6I8 212 aa6.03□□□□□ -1.44
NUP43-204ENST00000403890 TRAV8-3A0A0A6YYJ7 113 aa6.02□□□□□ -1.45
NUP43-204ENST00000403890 CENPXA8MT69 81 aa6.02□□□□□ -1.45
NUP43-204ENST00000403890 SSSCA1O60232 199 aa6.02□□□□□ -1.45
NUP43-204ENST00000403890 SCGB1D2O95969 90 aa6.02□□□□□ -1.45
NUP43-204ENST00000403890 SMIM18P0DKX4 95 aa6.02□□□□□ -1.45
NUP43-204ENST00000403890 ZNF846Q147U1 533 aa6.02□□□□□ -1.45
NUP43-204ENST00000403890 GUK1Q16774 197 aa6.02□□□□□ -1.45
NUP43-204ENST00000403890 OR10J3Q5JRS4 329 aa6.02□□□□□ -1.45
NUP43-204ENST00000403890 ZNF546Q86UE3 836 aa6.02□□□□□ -1.45
NUP43-204ENST00000403890 ZNF479Q96JC4 524 aa6.02□□□□□ -1.45
NUP43-204ENST00000403890 GGACTQ9BVM4 153 aa6.02□□□□□ -1.45
NUP43-204ENST00000403890 DPH3P1Q9H4G8 78 aa6.02□□□□□ -1.45
NUP43-204ENST00000403890 AP5S1Q9NUS5 200 aa6.02□□□□□ -1.45
NUP43-204ENST00000403890 GSKIPQ9P0R6 139 aa6.02□□□□□ -1.45
NUP43-204ENST00000403890 TP53TG3Q9ULZ0 132 aa6.02□□□□□ -1.45
NUP43-204ENST00000403890 C9orf170A2RU37 121 aa6.01□□□□□ -1.45
NUP43-204ENST00000403890 RNF222A6NCQ9 220 aa6.01□□□□□ -1.45
NUP43-204ENST00000403890 NAP1L6A6NFF2 107 aa6.01□□□□□ -1.45
NUP43-204ENST00000403890 L7N2F9 121 aa6.01□□□□□ -1.45
NUP43-204ENST00000403890 MRPS12O15235 138 aaKnown RBP6.01□□□□□ -1.45
NUP43-204ENST00000403890 MPDU1O75352 247 aa6.01□□□□□ -1.45
NUP43-204ENST00000403890 SNRPCP09234 159 aaKnown RBP6.01□□□□□ -1.45
NUP43-204ENST00000403890 METTL15P1P0C7V9 234 aa6.01□□□□□ -1.45
NUP43-204ENST00000403890 RNASE4P34096 147 aaKnown RBP6.01□□□□□ -1.45
NUP43-204ENST00000403890 TAS2R30P59541 319 aa6.01□□□□□ -1.45
NUP43-204ENST00000403890 VAMP2P63027 116 aa6.01□□□□□ -1.45
NUP43-204ENST00000403890 CD300CQ08708 224 aa6.01□□□□□ -1.45
NUP43-204ENST00000403890 C4orf46Q504U0 113 aa6.01□□□□□ -1.45
NUP43-204ENST00000403890 C10orf113Q5VZT2 155 aa6.01□□□□□ -1.45
NUP43-204ENST00000403890 NHLRC2Q8NBF2 726 aa6.01□□□□□ -1.45
NUP43-204ENST00000403890 OR10G4Q8NGN3 311 aa6.01□□□□□ -1.45
NUP43-204ENST00000403890 OR1L4Q8NGR5 311 aa6.01□□□□□ -1.45
NUP43-204ENST00000403890 C20orf85Q9H1P6 137 aa6.01□□□□□ -1.45
NUP43-204ENST00000403890 LOC100131303A0A0U1RQF7 123 aa6□□□□□ -1.45
NUP43-204ENST00000403890 CCDC160A6NGH7 325 aa6□□□□□ -1.45
NUP43-204ENST00000403890 KLLNB2CW77 178 aa6□□□□□ -1.45
NUP43-204ENST00000403890 AGPAT2O15120 278 aa6□□□□□ -1.45
NUP43-204ENST00000403890 TSC22D2O75157 780 aa6□□□□□ -1.45
NUP43-204ENST00000403890 BCAP31P51572 246 aa6□□□□□ -1.45
NUP43-204ENST00000403890 SLC38A11Q08AI6 406 aa6□□□□□ -1.45
NUP43-204ENST00000403890 BTN1A1Q13410 526 aa6□□□□□ -1.45
NUP43-204ENST00000403890 IAH1Q2TAA2 248 aaPredicted RBP6□□□□□ -1.45
NUP43-204ENST00000403890 CNPY1Q3B7I2 92 aa6□□□□□ -1.45
NUP43-204ENST00000403890 SPANXN2Q5MJ10 180 aa6□□□□□ -1.45
NUP43-204ENST00000403890 PATE2Q6UY27 113 aa6□□□□□ -1.45
NUP43-204ENST00000403890 ATP6V0E2Q8NHE4 81 aa6□□□□□ -1.45
NUP43-204ENST00000403890 LINC00477Q96M19 166 aa6□□□□□ -1.45
NUP43-204ENST00000403890 PFDN5Q99471 154 aa6□□□□□ -1.45
NUP43-204ENST00000403890 ARPC5LQ9BPX5 153 aa6□□□□□ -1.45
NUP43-204ENST00000403890 SLIRPQ9GZT3 109 aaKnown RBP6□□□□□ -1.45
NUP43-204ENST00000403890 COX11Q9Y6N1 276 aa6□□□□□ -1.45
NUP43-204ENST00000403890 K7EPK0 472 aa5.99□□□□□ -1.45
NUP43-204ENST00000403890 SLC17A3O00476 420 aa5.99□□□□□ -1.45
NUP43-204ENST00000403890 PFN1P07737 140 aaKnown RBP5.99□□□□□ -1.45
NUP43-204ENST00000403890 OR4E1P0C645 316 aa5.99□□□□□ -1.45
NUP43-204ENST00000403890 CAMLGP49069 296 aa5.99□□□□□ -1.45
NUP43-204ENST00000403890 LELP1Q5T871 98 aa5.99□□□□□ -1.45
NUP43-204ENST00000403890 TRIQKQ629K1 86 aa5.99□□□□□ -1.45
NUP43-204ENST00000403890 TMEM14EPQ6UXP3 125 aa5.99□□□□□ -1.45
NUP43-204ENST00000403890 HSD17B11Q8NBQ5 300 aa5.99□□□□□ -1.45
NUP43-204ENST00000403890 RASL10AQ92737 203 aa5.99□□□□□ -1.45
NUP43-204ENST00000403890 TIMM9Q9Y5J7 89 aa5.99□□□□□ -1.45
NUP43-204ENST00000403890 IGHV1OR15-1A0A075B7D0 117 aa5.98□□□□□ -1.45
NUP43-204ENST00000403890 A0A0D9SG52 128 aa5.98□□□□□ -1.45
NUP43-204ENST00000403890 H3BMQ9 156 aa5.98□□□□□ -1.45
NUP43-204ENST00000403890 H3BTX0 84 aa5.98□□□□□ -1.45
NUP43-204ENST00000403890 GPX1P07203 203 aa5.98□□□□□ -1.45
NUP43-204ENST00000403890 PVALBP20472 110 aaPredicted RBP5.98□□□□□ -1.45
NUP43-204ENST00000403890 ERCC8Q13216 396 aa5.98□□□□□ -1.45
NUP43-204ENST00000403890 OPCMLQ14982 345 aa5.98□□□□□ -1.45
NUP43-204ENST00000403890 ODF1Q14990 250 aa5.98□□□□□ -1.45
NUP43-204ENST00000403890 TOR2AQ5JU69 321 aa5.98□□□□□ -1.45
NUP43-204ENST00000403890 SAT2Q96F10 170 aaPredicted RBP5.98□□□□□ -1.45
NUP43-204ENST00000403890 AAMDCQ9H7C9 122 aa5.98□□□□□ -1.45
NUP43-204ENST00000403890 RPH3ALQ9UNE2 315 aa5.98□□□□□ -1.45
NUP43-204ENST00000403890 PRELID1Q9Y255 219 aa5.98□□□□□ -1.45
NUP43-204ENST00000403890 TRAV8-1A0A0A6YYK1 113 aa5.97□□□□□ -1.45
NUP43-204ENST00000403890 ZNF253O75346 499 aa5.97□□□□□ -1.45
NUP43-204ENST00000403890 NDUFB6O95139 128 aa5.97□□□□□ -1.45
NUP43-204ENST00000403890 HIST1H1EP10412 219 aaKnown RBP5.97□□□□□ -1.45
NUP43-204ENST00000403890 NRARPQ7Z6K4 114 aa5.97□□□□□ -1.45
NUP43-204ENST00000403890 TRIM63Q969Q1 353 aa5.97□□□□□ -1.45
NUP43-204ENST00000403890 FAM19A4Q96LR4 140 aa5.97□□□□□ -1.45
NUP43-204ENST00000403890 LINC01600Q96MT4 127 aa5.97□□□□□ -1.45
NUP43-204ENST00000403890 TRAV4A0A0B4J268 109 aa5.96□□□□□ -1.46
NUP43-204ENST00000403890 C7orf66A4D0T2 115 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms