RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 PIP4P2Q8N4L2 257 aa13.19□□□□□ -0.3
SNRNP70-202ENST00000401730 GTSF1LQ9H1H1 148 aa13.19□□□□□ -0.3
SNRNP70-202ENST00000401730 NOTCH3Q9UM47 2321 aa13.19□□□□□ -0.3
SNRNP70-202ENST00000401730 Q5PR19 223 aa13.18□□□□□ -0.3
SNRNP70-202ENST00000401730 LINC01545Q5VT33 79 aa13.18□□□□□ -0.3
SNRNP70-202ENST00000401730 CCDC144NLQ6NUI1 221 aa13.18□□□□□ -0.3
SNRNP70-202ENST00000401730 LCNL1Q6ZST4 164 aa13.18□□□□□ -0.3
SNRNP70-202ENST00000401730 A1L4Q6 167 aa13.18□□□□□ -0.3
SNRNP70-202ENST00000401730 M0R1W7 72 aa13.18□□□□□ -0.3
SNRNP70-202ENST00000401730 C9orf118A6NHY6 69 aa13.17□□□□□ -0.3
SNRNP70-202ENST00000401730 PKD1L2Q7Z442 2459 aa13.17□□□□□ -0.3
SNRNP70-202ENST00000401730 RPL11P62913 178 aaKnown RBP13.17□□□□□ -0.3
SNRNP70-202ENST00000401730 SEC11AP67812 179 aa13.17□□□□□ -0.3
SNRNP70-202ENST00000401730 SMAGPQ0VAQ4 97 aa13.17□□□□□ -0.3
SNRNP70-202ENST00000401730 LY6EQ16553 131 aa13.17□□□□□ -0.3
SNRNP70-202ENST00000401730 MTURNQ8N3F0 131 aa13.17□□□□□ -0.3
SNRNP70-202ENST00000401730 SPOCK3Q9BQ16 436 aa13.17□□□□□ -0.3
SNRNP70-202ENST00000401730 K7ERJ3 54 aa13.16□□□□□ -0.3
SNRNP70-202ENST00000401730 IGF1P05019 195 aa13.16□□□□□ -0.3
SNRNP70-202ENST00000401730 KLRB1Q12918 225 aa13.16□□□□□ -0.3
SNRNP70-202ENST00000401730 C11orf71Q6IPW1 123 aa13.16□□□□□ -0.3
SNRNP70-202ENST00000401730 SRSF8Q9BRL6 282 aaKnown RBP13.16□□□□□ -0.3
SNRNP70-202ENST00000401730 IGHV3-11P01762 117 aa13.16□□□□□ -0.3
SNRNP70-202ENST00000401730 TRGV3P03979 118 aa13.15□□□□□ -0.3
SNRNP70-202ENST00000401730 PDE6HQ13956 83 aa13.15□□□□□ -0.3
SNRNP70-202ENST00000401730 C11orf21Q9P2W6 132 aa13.15□□□□□ -0.3
SNRNP70-202ENST00000401730 TLN2Q9Y4G6 2542 aa13.15□□□□□ -0.3
SNRNP70-202ENST00000401730 RPS20P60866 119 aaKnown RBP13.15□□□□□ -0.3
SNRNP70-202ENST00000401730 GLMPQ8WWB7 406 aa13.15□□□□□ -0.3
SNRNP70-202ENST00000401730 WFDC12Q8WWY7 111 aa13.15□□□□□ -0.3
SNRNP70-202ENST00000401730 ZANQ9Y493 2812 aa13.15□□□□□ -0.3
SNRNP70-202ENST00000401730 K7EP34 96 aa13.15□□□□□ -0.31
SNRNP70-202ENST00000401730 PRSS1P07477 247 aa13.15□□□□□ -0.31
SNRNP70-202ENST00000401730 LEPP41159 167 aa13.15□□□□□ -0.31
SNRNP70-202ENST00000401730 IFI27L1Q96BM0 104 aa13.15□□□□□ -0.31
SNRNP70-202ENST00000401730 USP9XQ93008 2570 aaPredicted RBP13.15□□□□□ -0.31
SNRNP70-202ENST00000401730 G3V4G9 280 aa13.14□□□□□ -0.31
SNRNP70-202ENST00000401730 AGPAT4-IT1Q9H0P7 198 aa13.14□□□□□ -0.31
SNRNP70-202ENST00000401730 ZNF575Q86XF7 245 aa13.14□□□□□ -0.31
SNRNP70-202ENST00000401730 CCDC140Q96MF4 163 aa13.14□□□□□ -0.31
SNRNP70-202ENST00000401730 KLK15Q9H2R5 256 aa13.14□□□□□ -0.31
SNRNP70-202ENST00000401730 CFAP46Q8IYW2 2715 aa13.14□□□□□ -0.31
SNRNP70-202ENST00000401730 FABP5P3A8MUU1 101 aa13.13□□□□□ -0.31
SNRNP70-202ENST00000401730 HBDP02042 147 aa13.13□□□□□ -0.31
SNRNP70-202ENST00000401730 SRD5A1P18405 259 aa13.13□□□□□ -0.31
SNRNP70-202ENST00000401730 BMI1P35226 326 aa13.13□□□□□ -0.31
SNRNP70-202ENST00000401730 SAMD13Q5VXD3 122 aa13.13□□□□□ -0.31
SNRNP70-202ENST00000401730 H3BRM9 83 aa13.13□□□□□ -0.31
SNRNP70-202ENST00000401730 BUB3O43684 328 aa13.13□□□□□ -0.31
SNRNP70-202ENST00000401730 TRBV12-3P01733 135 aa13.13□□□□□ -0.31
SNRNP70-202ENST00000401730 FABP2P12104 132 aa13.13□□□□□ -0.31
SNRNP70-202ENST00000401730 FBXL19-AS1Q494R0 122 aa13.13□□□□□ -0.31
SNRNP70-202ENST00000401730 Q6AWC8 147 aa13.13□□□□□ -0.31
SNRNP70-202ENST00000401730 Q8N6K4 173 aa13.13□□□□□ -0.31
SNRNP70-202ENST00000401730 ABCA2Q9BZC7 2435 aa13.12□□□□□ -0.31
SNRNP70-202ENST00000401730 TEX48A0A1B0GUV7 120 aa13.12□□□□□ -0.31
SNRNP70-202ENST00000401730 C19orf84I3L1E1 186 aa13.12□□□□□ -0.31
SNRNP70-202ENST00000401730 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.12□□□□□ -0.31
SNRNP70-202ENST00000401730 ZNF502Q8TBZ5 544 aa13.12□□□□□ -0.31
SNRNP70-202ENST00000401730 SIRPDQ9H106 197 aa13.12□□□□□ -0.31
SNRNP70-202ENST00000401730 TRBV6-1A0A0K0K1D8 114 aa13.12□□□□□ -0.31
SNRNP70-202ENST00000401730 SMAD7O15105 426 aaKnown RBP13.12□□□□□ -0.31
SNRNP70-202ENST00000401730 UFSP1Q6NVU6 142 aa13.12□□□□□ -0.31
SNRNP70-202ENST00000401730 IGKV3D-20A0A0C4DH25 116 aa13.11□□□□□ -0.31
SNRNP70-202ENST00000401730 ZNF493Q6ZR52 646 aa13.11□□□□□ -0.31
SNRNP70-202ENST00000401730 FGF6P10767 208 aa13.11□□□□□ -0.31
SNRNP70-202ENST00000401730 SETD2Q9BYW2 2564 aaPredicted RBP13.11□□□□□ -0.31
SNRNP70-202ENST00000401730 A0A1W2PPM0 123 aa13.11□□□□□ -0.31
SNRNP70-202ENST00000401730 FCER1GP30273 86 aa13.11□□□□□ -0.31
SNRNP70-202ENST00000401730 RNF185Q96GF1 192 aa13.11□□□□□ -0.31
SNRNP70-202ENST00000401730 TNFRSF6BO95407 300 aa13.1□□□□□ -0.31
SNRNP70-202ENST00000401730 SAMD5Q5TGI4 173 aa13.1□□□□□ -0.31
SNRNP70-202ENST00000401730 CLPSL1A2RUU4 121 aa13.1□□□□□ -0.31
SNRNP70-202ENST00000401730 HSD52Q0P140 79 aa13.1□□□□□ -0.31
SNRNP70-202ENST00000401730 DTX2Q86UW9 622 aa13.1□□□□□ -0.31
SNRNP70-202ENST00000401730 C16orf92Q96LL3 132 aa13.1□□□□□ -0.31
SNRNP70-202ENST00000401730 NPFFR1Q9GZQ6 430 aa13.1□□□□□ -0.31
SNRNP70-202ENST00000401730 ZFAND3Q9H8U3 227 aa13.1□□□□□ -0.31
SNRNP70-202ENST00000401730 A0A1B0GW15 77 aa13.09□□□□□ -0.31
SNRNP70-202ENST00000401730 F6UB75 175 aa13.09□□□□□ -0.31
SNRNP70-202ENST00000401730 H3BVH4 76 aa13.09□□□□□ -0.31
SNRNP70-202ENST00000401730 GTSCR1Q86UQ5 136 aa13.09□□□□□ -0.31
SNRNP70-202ENST00000401730 MAP1LC3AQ9H492 121 aa13.09□□□□□ -0.31
SNRNP70-202ENST00000401730 HIF1ANQ9NWT6 349 aa13.09□□□□□ -0.31
SNRNP70-202ENST00000401730 NHP2Q9NX24 153 aaKnown RBP13.09□□□□□ -0.31
SNRNP70-202ENST00000401730 PIEZO1Q92508 2521 aa13.09□□□□□ -0.31
SNRNP70-202ENST00000401730 SCGB2A1O75556 95 aa13.09□□□□□ -0.31
SNRNP70-202ENST00000401730 IGLC6P0CF74 106 aa13.09□□□□□ -0.31
SNRNP70-202ENST00000401730 TMEM78Q5T7P6 136 aa13.09□□□□□ -0.31
SNRNP70-202ENST00000401730 TMEM158Q8WZ71 300 aa13.09□□□□□ -0.31
SNRNP70-202ENST00000401730 FOXC2Q99958 501 aa13.09□□□□□ -0.31
SNRNP70-202ENST00000401730 M0R381 172 aa13.08□□□□□ -0.31
SNRNP70-202ENST00000401730 SPANXN1Q5VSR9 72 aa13.08□□□□□ -0.31
SNRNP70-202ENST00000401730 C8orf86Q6ZUL3 223 aa13.08□□□□□ -0.31
SNRNP70-202ENST00000401730 AJUBAQ96IF1 538 aa13.08□□□□□ -0.31
SNRNP70-202ENST00000401730 IGKV2D-26A0A0A0MRZ7 120 aa13.08□□□□□ -0.32
SNRNP70-202ENST00000401730 FXYD2P54710 66 aa13.08□□□□□ -0.32
SNRNP70-202ENST00000401730 UNQ9165/PRO28630Q6UXU0 137 aa13.08□□□□□ -0.32
SNRNP70-202ENST00000401730 TMEM160Q9NX00 188 aa13.08□□□□□ -0.32
SNRNP70-202ENST00000401730 TRAV40A0A0B4J280 105 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms