RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 TMEM219Q86XT9 240 aa8.31□□□□□ -1.08
LINC00649-202ENST00000400353 U3KQE9 123 aa8.31□□□□□ -1.08
LINC00649-202ENST00000400353 IGHV3OR16-10A0A075B7F0 116 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 CLPSL1A2RUU4 121 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 B4DSR2 109 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 SMAD7O15105 426 aaKnown RBP8.3□□□□□ -1.08
LINC00649-202ENST00000400353 C3orf79P0CE67 100 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 PLA2G2AP14555 144 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 ZNF493Q6ZR52 646 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 Q8N976 141 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 USMG5Q96IX5 58 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 UFC1Q9Y3C8 167 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 MAP1AP78559 2803 aaPredicted RBP8.3□□□□□ -1.08
LINC00649-202ENST00000400353 AKAP6Q13023 2319 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 FAM181BA6NEQ2 426 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 IGHG2P01859 326 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 TRGV3P03979 118 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 OR5AL1P0C617 328 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 ARMS2P0C7Q2 107 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 BRD3OSQ6XYD6 125 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 FAM19A2Q8N3H0 131 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 SMIM20Q8N5G0 67 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 PTH2Q96A98 100 aa8.3□□□□□ -1.08
LINC00649-202ENST00000400353 IGHG4P01861 327 aa8.29□□□□□ -1.08
LINC00649-202ENST00000400353 CD33P20138 364 aa8.29□□□□□ -1.08
LINC00649-202ENST00000400353 SMAGPQ0VAQ4 97 aa8.29□□□□□ -1.08
LINC00649-202ENST00000400353 Q71RC1 249 aaPredicted RBP8.29□□□□□ -1.08
LINC00649-202ENST00000400353 ZNF580Q9UK33 172 aa8.29□□□□□ -1.08
LINC00649-202ENST00000400353 FBN2P35556 2912 aa8.28□□□□□ -1.08
LINC00649-202ENST00000400353 IGHV3-35A0A0C4DH35 117 aa8.28□□□□□ -1.08
LINC00649-202ENST00000400353 TMEM213A2RRL7 107 aa8.28□□□□□ -1.08
LINC00649-202ENST00000400353 FABP5P3A8MUU1 101 aa8.28□□□□□ -1.08
LINC00649-202ENST00000400353 IGHV4-38-2P0DP08 117 aa8.28□□□□□ -1.08
LINC00649-202ENST00000400353 GAGE5Q13069 117 aa8.28□□□□□ -1.08
LINC00649-202ENST00000400353 GAGE6Q13070 117 aa8.28□□□□□ -1.08
LINC00649-202ENST00000400353 VGLL1Q99990 258 aa8.28□□□□□ -1.08
LINC00649-202ENST00000400353 MRPS16Q9Y3D3 137 aaKnown RBP8.28□□□□□ -1.08
LINC00649-202ENST00000400353 RNF114Q9Y508 228 aa8.28□□□□□ -1.08
LINC00649-202ENST00000400353 FASNP49327 2511 aaKnown RBP8.28□□□□□ -1.08
LINC00649-202ENST00000400353 H3BUX3 64 aa8.28□□□□□ -1.08
LINC00649-202ENST00000400353 NDUFA4O00483 81 aa8.28□□□□□ -1.08
LINC00649-202ENST00000400353 CTRLP40313 264 aa8.28□□□□□ -1.08
LINC00649-202ENST00000400353 LYZL1Q6UWQ5 148 aa8.28□□□□□ -1.08
LINC00649-202ENST00000400353 KLHDC1Q8N7A1 406 aa8.28□□□□□ -1.08
LINC00649-202ENST00000400353 URB1-AS1Q96HZ7 61 aa8.28□□□□□ -1.08
LINC00649-202ENST00000400353 ASCL2Q99929 193 aa8.28□□□□□ -1.08
LINC00649-202ENST00000400353 IGHV3OR16-8A0A075B7F1 116 aa8.27□□□□□ -1.09
LINC00649-202ENST00000400353 J3QKU1 62 aa8.27□□□□□ -1.09
LINC00649-202ENST00000400353 J3QLI3 93 aa8.27□□□□□ -1.09
LINC00649-202ENST00000400353 C9orf139Q6ZV77 190 aa8.27□□□□□ -1.09
LINC00649-202ENST00000400353 NEGR1Q7Z3B1 354 aa8.27□□□□□ -1.09
LINC00649-202ENST00000400353 UQCR10Q9UDW1 63 aa8.27□□□□□ -1.09
LINC00649-202ENST00000400353 PAM16Q9Y3D7 125 aa8.27□□□□□ -1.09
LINC00649-202ENST00000400353 HLA-DMBP28068 263 aa8.26□□□□□ -1.09
LINC00649-202ENST00000400353 PPIFP30405 207 aaKnown RBP8.26□□□□□ -1.09
LINC00649-202ENST00000400353 HIST1H1AQ02539 215 aaPredicted RBP8.26□□□□□ -1.09
LINC00649-202ENST00000400353 SVEP1Q4LDE5 3571 aa8.26□□□□□ -1.09
LINC00649-202ENST00000400353 A0A0G2JLM5 398 aa8.26□□□□□ -1.09
LINC00649-202ENST00000400353 IGLC6P0CF74 106 aa8.26□□□□□ -1.09
LINC00649-202ENST00000400353 COX6B1P14854 86 aa8.26□□□□□ -1.09
LINC00649-202ENST00000400353 LY6EQ16553 131 aa8.26□□□□□ -1.09
LINC00649-202ENST00000400353 LINC01559Q495D7 138 aa8.26□□□□□ -1.09
LINC00649-202ENST00000400353 SPATA45Q537H7 98 aa8.26□□□□□ -1.09
LINC00649-202ENST00000400353 TMEM78Q5T7P6 136 aa8.26□□□□□ -1.09
LINC00649-202ENST00000400353 IGFL4Q6B9Z1 124 aa8.26□□□□□ -1.09
LINC00649-202ENST00000400353 LINC01356Q8N9X3 169 aa8.26□□□□□ -1.09
LINC00649-202ENST00000400353 Q8TAT8 98 aa8.26□□□□□ -1.09
LINC00649-202ENST00000400353 TMEM70Q9BUB7 260 aa8.26□□□□□ -1.09
LINC00649-202ENST00000400353 GTSF1LQ9H1H1 148 aa8.26□□□□□ -1.09
LINC00649-202ENST00000400353 U3KQK5 164 aa8.26□□□□□ -1.09
LINC00649-202ENST00000400353 SPG11Q96JI7 2443 aa8.26□□□□□ -1.09
LINC00649-202ENST00000400353 TRAV8-2A0A0B4J237 113 aa8.25□□□□□ -1.09
LINC00649-202ENST00000400353 IGHV1-24A0A0C4DH33 117 aa8.25□□□□□ -1.09
LINC00649-202ENST00000400353 C2orf70A6NJV1 201 aa8.25□□□□□ -1.09
LINC00649-202ENST00000400353 ZNF138P52744 262 aa8.25□□□□□ -1.09
LINC00649-202ENST00000400353 FAM104BQ5XKR9 115 aa8.25□□□□□ -1.09
LINC00649-202ENST00000400353 EBLN2Q6P2I7 272 aa8.25□□□□□ -1.09
LINC00649-202ENST00000400353 C9orf47Q6ZRZ4 202 aa8.25□□□□□ -1.09
LINC00649-202ENST00000400353 C8orf86Q6ZUL3 223 aa8.25□□□□□ -1.09
LINC00649-202ENST00000400353 HSPB8Q9UJY1 196 aa8.25□□□□□ -1.09
LINC00649-202ENST00000400353 TMSB15BA0A087X1C1 80 aa8.25□□□□□ -1.09
LINC00649-202ENST00000400353 LEPROTL1O95214 131 aa8.25□□□□□ -1.09
LINC00649-202ENST00000400353 ZNF80P51504 273 aaPredicted RBP8.25□□□□□ -1.09
LINC00649-202ENST00000400353 Q6ZVH6 145 aa8.25□□□□□ -1.09
LINC00649-202ENST00000400353 FA2HQ7L5A8 372 aa8.25□□□□□ -1.09
LINC00649-202ENST00000400353 VPREB3Q9UKI3 123 aa8.25□□□□□ -1.09
LINC00649-202ENST00000400353 LENEPQ9Y5L5 61 aa8.25□□□□□ -1.09
LINC00649-202ENST00000400353 ABCA12Q86UK0 2595 aa8.25□□□□□ -1.09
LINC00649-202ENST00000400353 POLQO75417 2590 aa8.24□□□□□ -1.09
LINC00649-202ENST00000400353 IGHV3-66A0A0C4DH42 116 aa8.24□□□□□ -1.09
LINC00649-202ENST00000400353 PRAC2D3DTV9 90 aa8.24□□□□□ -1.09
LINC00649-202ENST00000400353 CRXO43186 299 aaPredicted RBP8.24□□□□□ -1.09
LINC00649-202ENST00000400353 ORM1P02763 201 aa8.24□□□□□ -1.09
LINC00649-202ENST00000400353 ERCC8Q13216 396 aa8.24□□□□□ -1.09
LINC00649-202ENST00000400353 RNF182Q8N6D2 247 aa8.24□□□□□ -1.09
LINC00649-202ENST00000400353 C16orf92Q96LL3 132 aa8.24□□□□□ -1.09
LINC00649-202ENST00000400353 DUX5Q96PT3 197 aa8.24□□□□□ -1.09
LINC00649-202ENST00000400353 CNFNQ9BYD5 112 aa8.24□□□□□ -1.09
LINC00649-202ENST00000400353 LINC00527Q9UJ94 153 aa8.24□□□□□ -1.09
LINC00649-202ENST00000400353 DOPEY2Q9Y3R5 2298 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms