RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 GAGE12HA6NDE8 117 aa7.11□□□□□ -1.27
PTPRM-202ENST00000400053 PRSS46E5RG02 174 aa7.11□□□□□ -1.27
PTPRM-202ENST00000400053 CGB3P0DN86 165 aa7.11□□□□□ -1.27
PTPRM-202ENST00000400053 AZU1P20160 251 aa7.11□□□□□ -1.27
PTPRM-202ENST00000400053 TMEM75Q8N9X5 138 aa7.11□□□□□ -1.27
PTPRM-202ENST00000400053 PTPRQQ9UMZ3 2332 aa7.11□□□□□ -1.27
PTPRM-202ENST00000400053 TEX48A0A1B0GUV7 120 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 KIR2DL5BA0A0G2JN68 375 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 KIR2DL5BA0A0G2JPC4 375 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 A0A1W2PPM0 123 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 IFITM1P13164 125 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 RBM3P98179 157 aaKnown RBP7.1□□□□□ -1.27
PTPRM-202ENST00000400053 KIR2DL5AQ8N109 375 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 FAM110DQ8TAY7 271 aaPredicted RBP7.1□□□□□ -1.27
PTPRM-202ENST00000400053 C8orf49Q96NF6 230 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 TMEM14BQ9NUH8 114 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 PLA2G2EQ9NZK7 142 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 GAGE12JA6NER3 117 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 OVOL3O00110 214 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 IGHG4P01861 327 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 GAGE4Q13068 117 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 GAGE5Q13069 117 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 NDUFA12Q9UI09 145 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 MSRB2Q9Y3D2 182 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 H3BQ85 93 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 HERVK_113P63121 156 aa7.1□□□□□ -1.27
PTPRM-202ENST00000400053 SMIM27A0A1W2PRY6 76 aa7.09□□□□□ -1.27
PTPRM-202ENST00000400053 DKK1O94907 266 aa7.09□□□□□ -1.27
PTPRM-202ENST00000400053 PFN2P35080 140 aa7.09□□□□□ -1.27
PTPRM-202ENST00000400053 NBL1P41271 181 aa7.09□□□□□ -1.27
PTPRM-202ENST00000400053 MRPL51Q4U2R6 128 aaKnown RBP7.09□□□□□ -1.27
PTPRM-202ENST00000400053 LYPD2Q6UXB3 125 aa7.09□□□□□ -1.27
PTPRM-202ENST00000400053 PRO1854Q9UHT4 67 aa7.09□□□□□ -1.27
PTPRM-202ENST00000400053 KIAA1671Q9BY89 1806 aa7.09□□□□□ -1.27
PTPRM-202ENST00000400053 IGHV1OR15-1A0A075B7D0 117 aa7.09□□□□□ -1.27
PTPRM-202ENST00000400053 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.09□□□□□ -1.27
PTPRM-202ENST00000400053 COA6Q5JTJ3 125 aaKnown RBP7.09□□□□□ -1.27
PTPRM-202ENST00000400053 Q8NFD4 153 aa7.09□□□□□ -1.27
PTPRM-202ENST00000400053 SIGLEC8Q9NYZ4 499 aa7.09□□□□□ -1.27
PTPRM-202ENST00000400053 hADV29S1A0JD25 119 aa7.09□□□□□ -1.27
PTPRM-202ENST00000400053 TCF15Q12870 199 aa7.09□□□□□ -1.27
PTPRM-202ENST00000400053 FAM231DQ6ZW35 169 aa7.09□□□□□ -1.27
PTPRM-202ENST00000400053 RNASE8Q8TDE3 154 aaKnown RBP7.09□□□□□ -1.27
PTPRM-202ENST00000400053 MRPL35Q9NZE8 188 aaKnown RBP7.09□□□□□ -1.27
PTPRM-202ENST00000400053 LTBP2Q14767 1821 aa7.09□□□□□ -1.27
PTPRM-202ENST00000400053 K7EN84 100 aa7.09□□□□□ -1.27
PTPRM-202ENST00000400053 KIF26AQ9ULI4 1882 aaPredicted RBP7.09□□□□□ -1.28
PTPRM-202ENST00000400053 C22orf46C9J442 243 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 LINC01619G3V211 115 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 FUSP35637 526 aaKnown RBP eCLIP7.08□□□□□ -1.28
PTPRM-202ENST00000400053 SYNJ2BPP57105 145 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 ZGRF1Q86YA3 2104 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 ATP6V0BQ99437 205 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 OBSL1O75147 1896 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 IGLC7A0M8Q6 106 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 LGALS9BQ3B8N2 356 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 LGALS9CQ6DKI2 356 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 Q6ZS92 163 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 C11orf52Q96A22 123 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 NCOR1P1Q9H4R4 102 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 GTF3C1Q12789 2109 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 TNCP24821 2201 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 ZNF503-AS2A6NEH8 195 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 NDUFB1O75438 58 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 FGF6P10767 208 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 ANKRD29Q8N6D5 301 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 SDHAF1A6NFY7 115 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 LY6HO94772 140 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 ACYP1P07311 99 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 HLA-DMBP28068 263 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 CDKN1BP46527 198 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 MORN5Q5VZ52 161 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 Q6ZSR3 168 aa7.08□□□□□ -1.28
PTPRM-202ENST00000400053 CHKB-CPT1BH3BT56 60 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 NPYP01303 97 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 NDUFA4L2Q9NRX3 87 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 DKK2Q9UBU2 259 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 TRBV19A0A075B6N1 114 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 TRAV26-2A0A0B4J265 109 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 PRSS29PA6NIE9 313 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 NDUFC2O95298 119 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 UBE2E1P51965 193 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 UBE2BP63146 152 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 PYGO2Q9BRQ0 406 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 MED13Q9UHV7 2174 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 C2CD3Q4AC94 2353 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 NDUFS5O43920 106 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 MP68P56378 58 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 BRD3OSQ6XYD6 125 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 WDR86Q86TI4 376 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 TTC28Q96AY4 2481 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 WT1-ASQ06250 92 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 LINC01545Q5VT33 79 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 XCL2Q9UBD3 114 aa7.07□□□□□ -1.28
PTPRM-202ENST00000400053 K7EMI3 77 aa7.06□□□□□ -1.28
PTPRM-202ENST00000400053 HLA-DRB4P13762 266 aa7.06□□□□□ -1.28
PTPRM-202ENST00000400053 SAA4P35542 130 aa7.06□□□□□ -1.28
PTPRM-202ENST00000400053 HLA-DRB4X5D2U9 266 aa7.06□□□□□ -1.28
PTPRM-202ENST00000400053 C2orf16Q68DN1 1984 aa7.06□□□□□ -1.28
PTPRM-202ENST00000400053 J3QLI3 93 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms