RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 TRBV12-3P01733 135 aa8.89□□□□□ -0.99
CACNA1C-217ENST00000399641 DEFB112Q30KQ8 113 aa8.89□□□□□ -0.99
CACNA1C-217ENST00000399641 B9D2Q9BPU9 175 aa8.89□□□□□ -0.99
CACNA1C-217ENST00000399641 MRPL36Q9P0J6 103 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-217ENST00000399641 F8W1H4 67 aa8.89□□□□□ -0.99
CACNA1C-217ENST00000399641 IGLC2P0DOY2 106 aa8.89□□□□□ -0.99
CACNA1C-217ENST00000399641 IGLC3P0DOY3 106 aa8.89□□□□□ -0.99
CACNA1C-217ENST00000399641 RNF5Q99942 180 aa8.89□□□□□ -0.99
CACNA1C-217ENST00000399641 TEX36Q5VZQ5 186 aa8.88□□□□□ -0.99
CACNA1C-217ENST00000399641 KLHDC3Q9BQ90 382 aa8.88□□□□□ -0.99
CACNA1C-217ENST00000399641 ZNRD1Q9P1U0 126 aa8.88□□□□□ -0.99
CACNA1C-217ENST00000399641 VPREB3Q9UKI3 123 aa8.88□□□□□ -0.99
CACNA1C-217ENST00000399641 MTCL1Q9Y4B5 1905 aaKnown RBP8.88□□□□□ -0.99
CACNA1C-217ENST00000399641 K7EP34 96 aa8.88□□□□□ -0.99
CACNA1C-217ENST00000399641 NMSQ5H8A3 153 aa8.88□□□□□ -0.99
CACNA1C-217ENST00000399641 HIST2H2BCQ6DN03 193 aa8.88□□□□□ -0.99
CACNA1C-217ENST00000399641 MIA3Q5JRA6 1907 aa8.88□□□□□ -0.99
CACNA1C-217ENST00000399641 SDHAF1A6NFY7 115 aa8.88□□□□□ -0.99
CACNA1C-217ENST00000399641 K7EP13 123 aa8.88□□□□□ -0.99
CACNA1C-217ENST00000399641 PLA2G2CQ5R387 149 aa8.88□□□□□ -0.99
CACNA1C-217ENST00000399641 COL24A1Q17RW2 1714 aa8.88□□□□□ -0.99
CACNA1C-217ENST00000399641 CRYGBP07316 175 aa8.87□□□□□ -0.99
CACNA1C-217ENST00000399641 HERVK_113P63121 156 aa8.87□□□□□ -0.99
CACNA1C-217ENST00000399641 APRG1Q8IVJ8 170 aa8.87□□□□□ -0.99
CACNA1C-217ENST00000399641 HS3ST6Q96QI5 342 aa8.87□□□□□ -0.99
CACNA1C-217ENST00000399641 A0A1W2PPM0 123 aa8.87□□□□□ -0.99
CACNA1C-217ENST00000399641 FNDC10F2Z333 226 aa8.87□□□□□ -0.99
CACNA1C-217ENST00000399641 ATP6V0E1O15342 81 aa8.87□□□□□ -0.99
CACNA1C-217ENST00000399641 TREML4Q6UXN2 200 aa8.87□□□□□ -0.99
CACNA1C-217ENST00000399641 GFI1Q99684 422 aa8.87□□□□□ -0.99
CACNA1C-217ENST00000399641 ELANEP08246 267 aa8.87□□□□□ -0.99
CACNA1C-217ENST00000399641 IGFBP3P17936 291 aaPredicted RBP8.87□□□□□ -0.99
CACNA1C-217ENST00000399641 RNF144BQ7Z419 303 aa8.87□□□□□ -0.99
CACNA1C-217ENST00000399641 GAFA1Q96PS6 74 aa8.87□□□□□ -0.99
CACNA1C-217ENST00000399641 A0A0B4J2C4 111 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 NDUFB8O95169 186 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 UBE2D1P51668 147 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 BVES-AS1Q5T3Y7 98 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 ZNF497Q6ZNH5 498 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 SH2D6Q7Z4S9 175 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 SPTBP11277 2137 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 IGFL3Q6UXB1 125 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 SIRPDQ9H106 197 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 DEFB136Q30KP8 78 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 LINC01559Q495D7 138 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 SERP2Q8N6R1 65 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 PRSS47A8MTI9 375 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 TMEM14DPA8MWL7 114 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 PRR20EP86478 221 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 PRR20CP86479 221 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 PRR20DP86480 221 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 PRR20BP86481 221 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 PRR20AP86496 221 aa8.86□□□□□ -0.99
CACNA1C-217ENST00000399641 IGHV7-4-1A0A0J9YVY3 117 aa8.85□□□□□ -0.99
CACNA1C-217ENST00000399641 CFPP27918 469 aa8.85□□□□□ -0.99
CACNA1C-217ENST00000399641 C8orf86Q6ZUL3 223 aa8.85□□□□□ -0.99
CACNA1C-217ENST00000399641 SRRM5B3KS81 715 aa8.85□□□□□ -0.99
CACNA1C-217ENST00000399641 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.85□□□□□ -0.99
CACNA1C-217ENST00000399641 CCL25O15444 150 aa8.85□□□□□ -0.99
CACNA1C-217ENST00000399641 GYPEP15421 78 aa8.85□□□□□ -0.99
CACNA1C-217ENST00000399641 Q6ZVH6 145 aa8.85□□□□□ -0.99
CACNA1C-217ENST00000399641 MESP1Q9BRJ9 268 aa8.85□□□□□ -0.99
CACNA1C-217ENST00000399641 LY96Q9Y6Y9 160 aa8.85□□□□□ -0.99
CACNA1C-217ENST00000399641 ZFC3H1O60293 1989 aaKnown RBP8.85□□□□□ -0.99
CACNA1C-217ENST00000399641 FGF16O43320 207 aa8.85□□□□□ -0.99
CACNA1C-217ENST00000399641 CLEC2BQ92478 149 aa8.85□□□□□ -0.99
CACNA1C-217ENST00000399641 POLR3KQ9Y2Y1 108 aaPredicted RBP8.85□□□□□ -0.99
CACNA1C-217ENST00000399641 GGNQ86UU5 652 aa8.84□□□□□ -0.99
CACNA1C-217ENST00000399641 HIGD2AQ9BW72 106 aa8.84□□□□□ -0.99
CACNA1C-217ENST00000399641 SPART-AS1P0CW21 52 aa8.84□□□□□ -0.99
CACNA1C-217ENST00000399641 MRPL51Q4U2R6 128 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-217ENST00000399641 Q86TA4 180 aa8.84□□□□□ -0.99
CACNA1C-217ENST00000399641 J3QQQ9 107 aa8.84□□□□□ -0.99
CACNA1C-217ENST00000399641 ZC2HC1AQ96GY0 325 aa8.84□□□□□ -0.99
CACNA1C-217ENST00000399641 MRPL35Q9NZE8 188 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-217ENST00000399641 TRBV10-2A0A0K0K1G8 114 aa8.84□□□□□ -0.99
CACNA1C-217ENST00000399641 RP1P56715 2156 aa8.84□□□□□ -0.99
CACNA1C-217ENST00000399641 Q8N8P6 123 aa8.84□□□□□ -0.99
CACNA1C-217ENST00000399641 UPK3BQ9BT76 320 aa8.84□□□□□ -0.99
CACNA1C-217ENST00000399641 DKK2Q9UBU2 259 aa8.84□□□□□ -0.99
CACNA1C-217ENST00000399641 G3V318 75 aa8.83□□□□□ -1
CACNA1C-217ENST00000399641 H0YIZ8 118 aa8.83□□□□□ -1
CACNA1C-217ENST00000399641 INAFM1C9JVW0 142 aa8.83□□□□□ -1
CACNA1C-217ENST00000399641 WI2-2373I1.2A0A1W2PRP0 233 aa8.83□□□□□ -1
CACNA1C-217ENST00000399641 G3V4G9 280 aa8.83□□□□□ -1
CACNA1C-217ENST00000399641 HIST2H2BDQ6DRA6 164 aa8.83□□□□□ -1
CACNA1C-217ENST00000399641 PIP4P1Q86T03 277 aa8.83□□□□□ -1
CACNA1C-217ENST00000399641 SLC25A29Q8N8R3 303 aa8.83□□□□□ -1
CACNA1C-217ENST00000399641 TM2D1Q9BX74 207 aa8.83□□□□□ -1
CACNA1C-217ENST00000399641 PAQR4Q8N4S7 273 aaPredicted RBP8.83□□□□□ -1
CACNA1C-217ENST00000399641 GNRH2O43555 120 aa8.83□□□□□ -1
CACNA1C-217ENST00000399641 RNF126Q9BV68 326 aa8.83□□□□□ -1
CACNA1C-217ENST00000399641 FAM240AA0A1B0GVK7 77 aa8.82□□□□□ -1
CACNA1C-217ENST00000399641 HLA-DMBP28068 263 aa8.82□□□□□ -1
CACNA1C-217ENST00000399641 UBE2D3P61077 147 aa8.82□□□□□ -1
CACNA1C-217ENST00000399641 SPANXA1Q9NS26 97 aa8.82□□□□□ -1
CACNA1C-217ENST00000399641 TMEM14BQ9NUH8 114 aa8.82□□□□□ -1
CACNA1C-217ENST00000399641 ICOSQ9Y6W8 199 aa8.82□□□□□ -1
CACNA1C-217ENST00000399641 COL6A6A6NMZ7 2263 aa8.82□□□□□ -1
CACNA1C-217ENST00000399641 RNF222A6NCQ9 220 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms