RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ARL6IP6Q8N6S5 226 aa14.74□□□□□ -0.05
PDLIM2-204ENST00000397760 DEFB136Q30KP8 78 aa14.73□□□□□ -0.05
PDLIM2-204ENST00000397760 TCF24Q7RTU0 167 aa14.73□□□□□ -0.05
PDLIM2-204ENST00000397760 CITED2Q99967 270 aaPredicted RBP14.73□□□□□ -0.05
PDLIM2-204ENST00000397760 NDFIP1Q9BT67 221 aa14.73□□□□□ -0.05
PDLIM2-204ENST00000397760 UQCR10Q9UDW1 63 aa14.73□□□□□ -0.05
PDLIM2-204ENST00000397760 SERTM2A0A1B0GWG4 89 aa14.73□□□□□ -0.05
PDLIM2-204ENST00000397760 NTF3P20783 257 aa14.73□□□□□ -0.05
PDLIM2-204ENST00000397760 SPATA45Q537H7 98 aa14.73□□□□□ -0.05
PDLIM2-204ENST00000397760 FAM19A2Q8N3H0 131 aa14.73□□□□□ -0.05
PDLIM2-204ENST00000397760 SGK494Q96LW2 274 aa14.73□□□□□ -0.05
PDLIM2-204ENST00000397760 TSSC4Q9Y5U2 329 aaPredicted RBP14.73□□□□□ -0.05
PDLIM2-204ENST00000397760 A0A1B0GW15 77 aa14.72□□□□□ -0.05
PDLIM2-204ENST00000397760 M0R2Z0 102 aa14.72□□□□□ -0.05
PDLIM2-204ENST00000397760 BUB3O43684 328 aa14.72□□□□□ -0.05
PDLIM2-204ENST00000397760 APOHP02749 345 aaPredicted RBP14.72□□□□□ -0.05
PDLIM2-204ENST00000397760 HOXD3P31249 432 aaPredicted RBP14.72□□□□□ -0.05
PDLIM2-204ENST00000397760 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.72□□□□□ -0.05
PDLIM2-204ENST00000397760 GATD1Q8NB37 220 aa14.72□□□□□ -0.05
PDLIM2-204ENST00000397760 OR2D3Q8NGH3 330 aa14.72□□□□□ -0.05
PDLIM2-204ENST00000397760 U3KQE9 123 aa14.72□□□□□ -0.05
PDLIM2-204ENST00000397760 IGHV3OR16-13A0A075B7E8 117 aa14.71□□□□□ -0.05
PDLIM2-204ENST00000397760 IGHV3-49A0A0A0MS15 119 aa14.71□□□□□ -0.05
PDLIM2-204ENST00000397760 IGHV3-74A0A0B4J1X5 117 aa14.71□□□□□ -0.05
PDLIM2-204ENST00000397760 IGHV3-66A0A0C4DH42 116 aa14.71□□□□□ -0.05
PDLIM2-204ENST00000397760 A0A1W2PRX2 142 aa14.71□□□□□ -0.05
PDLIM2-204ENST00000397760 LINC01619G3V211 115 aa14.71□□□□□ -0.05
PDLIM2-204ENST00000397760 BTF3P20290 206 aaKnown RBP14.71□□□□□ -0.05
PDLIM2-204ENST00000397760 Q6AWC8 147 aa14.71□□□□□ -0.05
PDLIM2-204ENST00000397760 SIGLEC15Q6ZMC9 328 aa14.71□□□□□ -0.05
PDLIM2-204ENST00000397760 C8orf86Q6ZUL3 223 aa14.71□□□□□ -0.05
PDLIM2-204ENST00000397760 GOLT1AQ6ZVE7 132 aa14.71□□□□□ -0.05
PDLIM2-204ENST00000397760 OR11H1Q8NG94 326 aa14.71□□□□□ -0.05
PDLIM2-204ENST00000397760 OR1N2Q8NGR9 330 aa14.71□□□□□ -0.05
PDLIM2-204ENST00000397760 DPF1Q92782 380 aa14.71□□□□□ -0.05
PDLIM2-204ENST00000397760 SSBP4Q9BWG4 385 aaPredicted RBP14.71□□□□□ -0.05
PDLIM2-204ENST00000397760 MRPS12O15235 138 aaKnown RBP14.71□□□□□ -0.06
PDLIM2-204ENST00000397760 TM4SF20Q53R12 229 aa14.71□□□□□ -0.06
PDLIM2-204ENST00000397760 PGLYRP4Q96LB8 373 aa14.71□□□□□ -0.06
PDLIM2-204ENST00000397760 DAZ1Q9NQZ3 744 aaKnown RBP14.71□□□□□ -0.06
PDLIM2-204ENST00000397760 IGLC3P0DOY3 106 aa14.7□□□□□ -0.06
PDLIM2-204ENST00000397760 RPL7P18124 248 aaKnown RBP14.7□□□□□ -0.06
PDLIM2-204ENST00000397760 SYNJ2BPP57105 145 aa14.7□□□□□ -0.06
PDLIM2-204ENST00000397760 EXOC3-AS1Q8N2X6 119 aa14.7□□□□□ -0.06
PDLIM2-204ENST00000397760 UFC1Q9Y3C8 167 aa14.7□□□□□ -0.06
PDLIM2-204ENST00000397760 FBLL1A6NHQ2 334 aaKnown RBP14.69□□□□□ -0.06
PDLIM2-204ENST00000397760 H3BTX0 84 aa14.69□□□□□ -0.06
PDLIM2-204ENST00000397760 K7EMT4 169 aa14.69□□□□□ -0.06
PDLIM2-204ENST00000397760 PSG3Q16557 428 aa14.69□□□□□ -0.06
PDLIM2-204ENST00000397760 RNASEKQ6P5S7 137 aaKnown RBP14.69□□□□□ -0.06
PDLIM2-204ENST00000397760 PRNTQ86SH4 94 aa14.69□□□□□ -0.06
PDLIM2-204ENST00000397760 DUX3Q96PT4 197 aa14.69□□□□□ -0.06
PDLIM2-204ENST00000397760 LOC102724200A0A096LPH7 203 aaPredicted RBP14.69□□□□□ -0.06
PDLIM2-204ENST00000397760 C2orf70A6NJV1 201 aa14.69□□□□□ -0.06
PDLIM2-204ENST00000397760 CHEK1O14757 476 aa14.69□□□□□ -0.06
PDLIM2-204ENST00000397760 CRXO43186 299 aaPredicted RBP14.69□□□□□ -0.06
PDLIM2-204ENST00000397760 OR5AL1P0C617 328 aa14.69□□□□□ -0.06
PDLIM2-204ENST00000397760 SLURP1P55000 103 aa14.69□□□□□ -0.06
PDLIM2-204ENST00000397760 IGHV7-4-1A0A0J9YVY3 117 aa14.68□□□□□ -0.06
PDLIM2-204ENST00000397760 LGALS9O00182 355 aa14.68□□□□□ -0.06
PDLIM2-204ENST00000397760 KRTAP10-3P60369 221 aa14.68□□□□□ -0.06
PDLIM2-204ENST00000397760 PSG8Q9UQ74 426 aa14.68□□□□□ -0.06
PDLIM2-204ENST00000397760 TRAV8-1A0A0A6YYK1 113 aa14.67□□□□□ -0.06
PDLIM2-204ENST00000397760 RIGQ13278 110 aa14.67□□□□□ -0.06
PDLIM2-204ENST00000397760 SMAD5-AS1Q9Y6J3 95 aa14.67□□□□□ -0.06
PDLIM2-204ENST00000397760 C2CD3Q4AC94 2353 aa14.66□□□□□ -0.06
PDLIM2-204ENST00000397760 TRAV9-2A0A087WT02 112 aa14.66□□□□□ -0.06
PDLIM2-204ENST00000397760 A0A1B0GUT8 65 aa14.66□□□□□ -0.06
PDLIM2-204ENST00000397760 PSG9Q00887 426 aa14.66□□□□□ -0.06
PDLIM2-204ENST00000397760 EBLN2Q6P2I7 272 aa14.66□□□□□ -0.06
PDLIM2-204ENST00000397760 COX8CQ7Z4L0 72 aa14.66□□□□□ -0.06
PDLIM2-204ENST00000397760 URB1-AS1Q96HZ7 61 aa14.66□□□□□ -0.06
PDLIM2-204ENST00000397760 RAX2Q96IS3 184 aa14.66□□□□□ -0.06
PDLIM2-204ENST00000397760 C17orf77Q96MU5 243 aa14.66□□□□□ -0.06
PDLIM2-204ENST00000397760 TMEM70Q9BUB7 260 aa14.66□□□□□ -0.06
PDLIM2-204ENST00000397760 AAMDCQ9H7C9 122 aa14.66□□□□□ -0.06
PDLIM2-204ENST00000397760 GAGE1Q13065 139 aa14.66□□□□□ -0.06
PDLIM2-204ENST00000397760 COL5A1-AS1Q5SY13 56 aa14.66□□□□□ -0.06
PDLIM2-204ENST00000397760 ZC2HC1AQ96GY0 325 aa14.66□□□□□ -0.06
PDLIM2-204ENST00000397760 RHPN1-AS1Q9BWJ2 59 aa14.66□□□□□ -0.06
PDLIM2-204ENST00000397760 SMPXQ9UHP9 88 aa14.66□□□□□ -0.06
PDLIM2-204ENST00000397760 NIPBLQ6KC79 2804 aaeCLIP14.65□□□□□ -0.06
PDLIM2-204ENST00000397760 TMEM213A2RRL7 107 aa14.65□□□□□ -0.06
PDLIM2-204ENST00000397760 LINC00614P0C842 121 aa14.65□□□□□ -0.06
PDLIM2-204ENST00000397760 EDN2P20800 178 aa14.65□□□□□ -0.06
PDLIM2-204ENST00000397760 GLMPQ8WWB7 406 aa14.65□□□□□ -0.06
PDLIM2-204ENST00000397760 ZNF785A8K8V0 405 aa14.64□□□□□ -0.07
PDLIM2-204ENST00000397760 CCL24O00175 119 aa14.64□□□□□ -0.07
PDLIM2-204ENST00000397760 MRPS16Q9Y3D3 137 aaKnown RBP14.64□□□□□ -0.07
PDLIM2-204ENST00000397760 ADARB2-AS1A8MUL3 147 aa14.64□□□□□ -0.07
PDLIM2-204ENST00000397760 CSN1S1P47710 185 aa14.64□□□□□ -0.07
PDLIM2-204ENST00000397760 NSUN5P1Q3KNT7 163 aa14.64□□□□□ -0.07
PDLIM2-204ENST00000397760 DLX4Q92988 240 aaPredicted RBP14.64□□□□□ -0.07
PDLIM2-204ENST00000397760 CT45A10P0DMU9 189 aa14.63□□□□□ -0.07
PDLIM2-204ENST00000397760 FHL3Q13643 280 aa14.63□□□□□ -0.07
PDLIM2-204ENST00000397760 MAST4O15021 2626 aa14.63□□□□□ -0.07
PDLIM2-204ENST00000397760 TEP1Q99973 2627 aaKnown RBP14.63□□□□□ -0.07
PDLIM2-204ENST00000397760 HNRNPA3P51991 378 aaKnown RBP14.62□□□□□ -0.07
PDLIM2-204ENST00000397760 Q6ZN92 141 aa14.62□□□□□ -0.07
PDLIM2-204ENST00000397760 NDUFA11Q86Y39 141 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms