RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 IFI27P40305 119 aaPredicted RBP3.95□□□□□ -1.78
SSR1-202ENST00000397511 IGFL4Q6B9Z1 124 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 GOLT1AQ6ZVE7 132 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 PPP1R27Q86WC6 154 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 FMC1Q96HJ9 113 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 EPDR1Q9UM22 224 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 HIVEP3Q5T1R4 2406 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 ITPR1Q14643 2758 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 IGHV1-3A0A0C4DH29 117 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 LOC389332A0A1B0GUA5 103 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 C19orf71A6NCJ1 209 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 TMEM8BA6NDV4 472 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 M0R3E3 92 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 COL8A1P27658 744 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 FXYD7P58549 80 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 SRSF2Q01130 221 aaKnown RBP3.95□□□□□ -1.78
SSR1-202ENST00000397511 MRGPRG-AS1Q2M3A8 158 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 CFAP126Q5VTH2 177 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 OR1L4Q8NGR5 311 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 DLX4Q92988 240 aaPredicted RBP3.95□□□□□ -1.78
SSR1-202ENST00000397511 CITED1Q99966 193 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 SRSF8Q9BRL6 282 aaKnown RBP3.95□□□□□ -1.78
SSR1-202ENST00000397511 Q9H3A6 140 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 A0A096LNJ9 63 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 NCBP2LA6PVI3 153 aaKnown RBP3.95□□□□□ -1.78
SSR1-202ENST00000397511 TIMM23O14925 209 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 ID1P41134 155 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 GAGE2BQ13066 116 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 FHL3Q13643 280 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 GAGE2EQ4V326 116 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 TMEM155Q4W5P6 130 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 TTC32Q5I0X7 151 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 NFE4Q86UQ8 179 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 SRSF12Q8WXF0 261 aaKnown RBP3.95□□□□□ -1.78
SSR1-202ENST00000397511 RASL11BQ9BPW5 248 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 MLST8Q9BVC4 326 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 LINC00574Q9H8X3 128 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 GAGE2DQ9UEU5 116 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 SIGLEC9Q9Y336 463 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 KLF12Q9Y4X4 402 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.94□□□□□ -1.782e-8■■□□□ 12.6
SSR1-202ENST00000397511 IGHV3OR16-13A0A075B7E8 117 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 IGHV3-74A0A0B4J1X5 117 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 BUB1B-PAK6H3BSN5 160 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 CCL21O00585 134 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 CD3EP07766 207 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 ZNF688P0C7X2 276 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 NHLRC4P0CG21 123 aaPredicted RBP3.94□□□□□ -1.78
SSR1-202ENST00000397511 FAM106CPP0CH98 169 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 HLA-DRB4P13762 266 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 NDUFV3P56181 108 aaKnown RBP3.94□□□□□ -1.78
SSR1-202ENST00000397511 LOXL1Q08397 574 aaPredicted RBP3.94□□□□□ -1.78
SSR1-202ENST00000397511 FAM106AQ4KMX7 169 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 HIST1H4GQ99525 98 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 RAB1BQ9H0U4 201 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 MAP1LC3AQ9H492 121 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 DKK2Q9UBU2 259 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 HLA-DRB4X5D2U9 266 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 IGKV2D-26A0A0A0MRZ7 120 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 TRAV25A0A0B4J276 109 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 CCDC179H3BU77 68 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 RHODO00212 210 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 NDUFS7O75251 213 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 FSTL3O95633 263 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 IL4P05112 153 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 SRD5A1P18405 259 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 FCER1GP30273 86 aa3.94□□□□□ -1.78
SSR1-202ENST00000397511 A0A087WX48 190 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 CENPVL3A0A0U1RRI6 287 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 K7EMI3 77 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 SCGB2A1O75556 95 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 SNCGO76070 127 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 TCRAP04437 139 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 IFITM1P13164 125 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 DLX6P56179 175 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 ANXA2RQ3ZCQ2 193 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 LYRM7Q5U5X0 104 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 ASCL5Q7RTU5 278 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 TEN1Q86WV5 123 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 GATD1Q8NB37 220 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 PIMREGQ9BSJ6 248 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 TTTY13Q9BZ97 58 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 FLNCQ14315 2725 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 IGHV3-66A0A0C4DH42 116 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 IGKCP01834 107 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 ARMS2P0C7Q2 107 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 MYCNOSP40205 109 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 SMCPP49901 116 aaPredicted RBP3.93□□□□□ -1.78
SSR1-202ENST00000397511 ZNF672Q499Z4 452 aaPredicted RBP3.93□□□□□ -1.78
SSR1-202ENST00000397511 SLC25A39Q9BZJ4 359 aaPredicted RBP3.93□□□□□ -1.78
SSR1-202ENST00000397511 VPREB3Q9UKI3 123 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 HIGD1AQ9Y241 93 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 TRBV20-1A0A075B6N2 111 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 TEX22C9J3V5 150 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 D6R8Y8 96 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 HOXA3O43365 443 aaPredicted RBP3.93□□□□□ -1.78
SSR1-202ENST00000397511 IGLV1-47P01700 117 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 GP9P14770 177 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 EVI2AP22794 236 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 PRTN3P24158 256 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms