RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 PDE6HQ13956 83 aa11.75□□□□□ -0.53
MCF2L-205ENST00000397017 MRGPRG-AS1Q2M3A8 158 aa11.75□□□□□ -0.53
MCF2L-205ENST00000397017 LYPD1Q8N2G4 141 aa11.75□□□□□ -0.53
MCF2L-205ENST00000397017 AGPAT4-IT1Q9H0P7 198 aa11.75□□□□□ -0.53
MCF2L-205ENST00000397017 TMEM14CQ9P0S9 112 aa11.75□□□□□ -0.53
MCF2L-205ENST00000397017 EGR2P11161 476 aaPredicted RBP11.74□□□□□ -0.53
MCF2L-205ENST00000397017 HOXD3P31249 432 aaPredicted RBP11.74□□□□□ -0.53
MCF2L-205ENST00000397017 ASIPP42127 132 aa11.74□□□□□ -0.53
MCF2L-205ENST00000397017 C9orf139Q6ZV77 190 aa11.74□□□□□ -0.53
MCF2L-205ENST00000397017 REC114Q7Z4M0 266 aa11.74□□□□□ -0.53
MCF2L-205ENST00000397017 WIPF2Q8TF74 440 aaPredicted RBP11.74□□□□□ -0.53
MCF2L-205ENST00000397017 UBE2E2Q96LR5 201 aa11.74□□□□□ -0.53
MCF2L-205ENST00000397017 LY96Q9Y6Y9 160 aa11.74□□□□□ -0.53
MCF2L-205ENST00000397017 FOXE3Q13461 319 aa11.74□□□□□ -0.53
MCF2L-205ENST00000397017 ZNF56Q15929 161 aa11.74□□□□□ -0.53
MCF2L-205ENST00000397017 GCN1Q92616 2671 aaKnown RBP11.74□□□□□ -0.53
MCF2L-205ENST00000397017 IGHV3-73A0A0B4J1V6 119 aa11.74□□□□□ -0.53
MCF2L-205ENST00000397017 D6R8Y8 96 aa11.74□□□□□ -0.53
MCF2L-205ENST00000397017 NDUFA4O00483 81 aa11.73□□□□□ -0.53
MCF2L-205ENST00000397017 RPS20P60866 119 aaKnown RBP11.73□□□□□ -0.53
MCF2L-205ENST00000397017 MAP1LC3CQ9BXW4 147 aa11.73□□□□□ -0.53
MCF2L-205ENST00000397017 SNAI2O43623 268 aa11.73□□□□□ -0.53
MCF2L-205ENST00000397017 EBI3Q14213 229 aa11.73□□□□□ -0.53
MCF2L-205ENST00000397017 NIT1Q86X76 327 aa11.73□□□□□ -0.53
MCF2L-205ENST00000397017 Q8N6K4 173 aa11.73□□□□□ -0.53
MCF2L-205ENST00000397017 TEX15Q9BXT5 2789 aa11.73□□□□□ -0.53
MCF2L-205ENST00000397017 LINC01587Q99440 93 aa11.72□□□□□ -0.53
MCF2L-205ENST00000397017 KLK9Q9UKQ9 250 aa11.72□□□□□ -0.53
MCF2L-205ENST00000397017 WI2-2373I1.2A0A1W2PRP0 233 aa11.72□□□□□ -0.53
MCF2L-205ENST00000397017 KNCNA6PVL3 124 aa11.72□□□□□ -0.53
MCF2L-205ENST00000397017 OR1N2Q8NGR9 330 aa11.72□□□□□ -0.53
MCF2L-205ENST00000397017 LINC00477Q96M19 166 aa11.72□□□□□ -0.53
MCF2L-205ENST00000397017 IGHV4OR15-8A0A075B7B6 117 aa11.72□□□□□ -0.53
MCF2L-205ENST00000397017 A0A087WW49 117 aa11.72□□□□□ -0.53
MCF2L-205ENST00000397017 PLP1P60201 277 aa11.72□□□□□ -0.53
MCF2L-205ENST00000397017 PAX2Q02962 417 aa11.72□□□□□ -0.53
MCF2L-205ENST00000397017 LOXL1Q08397 574 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-205ENST00000397017 ERASQ7Z444 233 aa11.72□□□□□ -0.53
MCF2L-205ENST00000397017 PEMTQ9UBM1 199 aa11.72□□□□□ -0.53
MCF2L-205ENST00000397017 C14orf178Q8N769 122 aaPredicted RBP11.71□□□□□ -0.53
MCF2L-205ENST00000397017 RAX2Q96IS3 184 aa11.71□□□□□ -0.53
MCF2L-205ENST00000397017 TRAV21A0A0B4J279 112 aa11.71□□□□□ -0.53
MCF2L-205ENST00000397017 PKIAP61925 76 aa11.71□□□□□ -0.53
MCF2L-205ENST00000397017 ORMDL3Q8N138 153 aa11.71□□□□□ -0.53
MCF2L-205ENST00000397017 IGHV7-4-1A0A0J9YVY3 117 aa11.71□□□□□ -0.54
MCF2L-205ENST00000397017 IGLC2P0DOY2 106 aa11.71□□□□□ -0.54
MCF2L-205ENST00000397017 PLA2G2AP14555 144 aa11.71□□□□□ -0.54
MCF2L-205ENST00000397017 Q6ZN92 141 aa11.71□□□□□ -0.54
MCF2L-205ENST00000397017 MEGF9Q9H1U4 602 aa11.71□□□□□ -0.54
MCF2L-205ENST00000397017 MAP1LC3AQ9H492 121 aa11.71□□□□□ -0.54
MCF2L-205ENST00000397017 NUPR1O60356 82 aa11.7□□□□□ -0.54
MCF2L-205ENST00000397017 IGF2BP2-AS1Q96M15 143 aa11.7□□□□□ -0.54
MCF2L-205ENST00000397017 LTAP01374 205 aa11.7□□□□□ -0.54
MCF2L-205ENST00000397017 RIPPLY3P57055 190 aa11.7□□□□□ -0.54
MCF2L-205ENST00000397017 MSRB1Q9NZV6 116 aa11.7□□□□□ -0.54
MCF2L-205ENST00000397017 ZNF256Q9Y2P7 627 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-205ENST00000397017 RPL35AP18077 110 aaKnown RBP11.7□□□□□ -0.54
MCF2L-205ENST00000397017 HNRNPA3P51991 378 aaKnown RBP11.7□□□□□ -0.54
MCF2L-205ENST00000397017 A0A087WWL8 130 aa11.69□□□□□ -0.54
MCF2L-205ENST00000397017 OVOL1O14753 267 aa11.69□□□□□ -0.54
MCF2L-205ENST00000397017 RCHY1Q96PM5 261 aa11.69□□□□□ -0.54
MCF2L-205ENST00000397017 SMPXQ9UHP9 88 aa11.69□□□□□ -0.54
MCF2L-205ENST00000397017 ITPR2Q14571 2701 aa11.69□□□□□ -0.54
MCF2L-205ENST00000397017 TRAV9-1A0A075B6T8 112 aa11.69□□□□□ -0.54
MCF2L-205ENST00000397017 EREGO14944 169 aa11.69□□□□□ -0.54
MCF2L-205ENST00000397017 TSPOP30536 169 aa11.69□□□□□ -0.54
MCF2L-205ENST00000397017 ZNF324O75467 553 aaPredicted RBP11.69□□□□□ -0.54
MCF2L-205ENST00000397017 NUDT3O95989 172 aa11.69□□□□□ -0.54
MCF2L-205ENST00000397017 NPSP0C0P6 89 aa11.69□□□□□ -0.54
MCF2L-205ENST00000397017 EDN2P20800 178 aa11.69□□□□□ -0.54
MCF2L-205ENST00000397017 PTTG1IPP53801 180 aa11.69□□□□□ -0.54
MCF2L-205ENST00000397017 TRAV26-2A0A0B4J265 109 aa11.68□□□□□ -0.54
MCF2L-205ENST00000397017 IGLV2-8P01709 118 aa11.68□□□□□ -0.54
MCF2L-205ENST00000397017 LINC00614P0C842 121 aa11.68□□□□□ -0.54
MCF2L-205ENST00000397017 XCL2Q9UBD3 114 aa11.68□□□□□ -0.54
MCF2L-205ENST00000397017 GTSF1Q8WW33 167 aa11.68□□□□□ -0.54
MCF2L-205ENST00000397017 TMEM191AQ9H0A3 160 aa11.68□□□□□ -0.54
MCF2L-205ENST00000397017 C18orf65Q6ZTR6 163 aa11.67□□□□□ -0.54
MCF2L-205ENST00000397017 M0R143 59 aa11.67□□□□□ -0.54
MCF2L-205ENST00000397017 IGF1P05019 195 aa11.67□□□□□ -0.54
MCF2L-205ENST00000397017 STHQ8IWL8 128 aa11.67□□□□□ -0.54
MCF2L-205ENST00000397017 OR10AG1Q8NH19 301 aa11.67□□□□□ -0.54
MCF2L-205ENST00000397017 TMEM190Q8WZ59 177 aa11.67□□□□□ -0.54
MCF2L-205ENST00000397017 UNC79Q9P2D8 2635 aa11.67□□□□□ -0.54
MCF2L-205ENST00000397017 SMIM27A0A1W2PRY6 76 aa11.67□□□□□ -0.54
MCF2L-205ENST00000397017 NMUP48645 174 aa11.67□□□□□ -0.54
MCF2L-205ENST00000397017 SRSF1Q07955 248 aaKnown RBP eCLIP11.67□□□□□ -0.54
MCF2L-205ENST00000397017 SPATA45Q537H7 98 aa11.67□□□□□ -0.54
MCF2L-205ENST00000397017 PIFOQ8TCI5 191 aa11.67□□□□□ -0.54
MCF2L-205ENST00000397017 LINC01619G3V211 115 aa11.67□□□□□ -0.54
MCF2L-205ENST00000397017 C1orf194Q5T5A4 169 aa11.67□□□□□ -0.54
MCF2L-205ENST00000397017 APRG1Q8IVJ8 170 aa11.67□□□□□ -0.54
MCF2L-205ENST00000397017 AP1S3Q96PC3 154 aa11.67□□□□□ -0.54
MCF2L-205ENST00000397017 HSPB8Q9UJY1 196 aa11.67□□□□□ -0.54
MCF2L-205ENST00000397017 GNRH2O43555 120 aa11.66□□□□□ -0.54
MCF2L-205ENST00000397017 C18orf32Q8TCD1 76 aa11.66□□□□□ -0.54
MCF2L-205ENST00000397017 VWC2LB2RUY7 222 aa11.66□□□□□ -0.54
MCF2L-205ENST00000397017 ELANEP08246 267 aa11.66□□□□□ -0.54
MCF2L-205ENST00000397017 ANXA2RQ3ZCQ2 193 aa11.66□□□□□ -0.54
MCF2L-205ENST00000397017 PRSS57Q6UWY2 283 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 216.3 ms