RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.13□□□□□ -2.39
CMC1-202ENST00000396610 TRAV13-1A0A0B4J241 112 aa0.13□□□□□ -2.39
CMC1-202ENST00000396610 GNG10P50151 68 aa0.13□□□□□ -2.39
CMC1-202ENST00000396610 CCSMST1Q4G0I0 132 aa0.13□□□□□ -2.39
CMC1-202ENST00000396610 TMEM78Q5T7P6 136 aa0.13□□□□□ -2.39
CMC1-202ENST00000396610 TEX29Q8N6K0 151 aa0.13□□□□□ -2.39
CMC1-202ENST00000396610 LXNQ9BS40 222 aa0.13□□□□□ -2.39
CMC1-202ENST00000396610 MRPL35Q9NZE8 188 aaKnown RBP0.13□□□□□ -2.39
CMC1-202ENST00000396610 LOC101927531A0A1B0GV80 90 aa0.12□□□□□ -2.39
CMC1-202ENST00000396610 LOC107986453A0A1B0GWG9 222 aa0.12□□□□□ -2.39
CMC1-202ENST00000396610 A0A1W2PRE2 83 aa0.12□□□□□ -2.39
CMC1-202ENST00000396610 GTF2A1P52655 376 aaPredicted RBP0.12□□□□□ -2.39
CMC1-202ENST00000396610 RPL37P61927 97 aaKnown RBP0.12□□□□□ -2.39
CMC1-202ENST00000396610 FXYD3Q14802 87 aa0.12□□□□□ -2.39
CMC1-202ENST00000396610 PCBD2Q9H0N5 130 aa0.12□□□□□ -2.39
CMC1-202ENST00000396610 C19orf12Q9NSK7 152 aa0.12□□□□□ -2.39
CMC1-202ENST00000396610 COMMD3Q9UBI1 195 aa0.12□□□□□ -2.39
CMC1-202ENST00000396610 MYH2Q9UKX2 1941 aa0.11□□□□□ -2.39
CMC1-202ENST00000396610 ROCK1Q13464 1354 aa0.11□□□□□ -2.39
CMC1-202ENST00000396610 DMBT1Q9UGM3 2413 aaPredicted RBP0.11□□□□□ -2.39
CMC1-202ENST00000396610 SLC25A4P12235 298 aa0.11□□□□□ -2.39
CMC1-202ENST00000396610 ASB16-AS1Q495Z4 193 aa0.11□□□□□ -2.39
CMC1-202ENST00000396610 PPP1R2P3Q6NXS1 205 aa0.11□□□□□ -2.39
CMC1-202ENST00000396610 DEFB132Q7Z7B7 95 aa0.11□□□□□ -2.39
CMC1-202ENST00000396610 MORN4Q8NDC4 146 aa0.11□□□□□ -2.39
CMC1-202ENST00000396610 ATPIF1Q9UII2 106 aa0.11□□□□□ -2.39
CMC1-202ENST00000396610 LOC285556D6RIA3 1793 aa0.11□□□□□ -2.39
CMC1-202ENST00000396610 FGD6Q6ZV73 1430 aa0.11□□□□□ -2.39
CMC1-202ENST00000396610 MACF1Q9UPN3 7388 aaKnown RBP0.11□□□□□ -2.39
CMC1-202ENST00000396610 NINQ8N4C6 2090 aa0.1□□□□□ -2.39
CMC1-202ENST00000396610 SPAG17Q6Q759 2223 aa0.1□□□□□ -2.39
CMC1-202ENST00000396610 NBDYA0A0U1RRE5 68 aa0.1□□□□□ -2.39
CMC1-202ENST00000396610 TMEM30CPA0ZSE6 113 aa0.1□□□□□ -2.39
CMC1-202ENST00000396610 TMEM189A5PLL7 270 aa0.1□□□□□ -2.39
CMC1-202ENST00000396610 IFITM5A6NNB3 132 aa0.1□□□□□ -2.39
CMC1-202ENST00000396610 HIGD1CA8MV81 97 aa0.1□□□□□ -2.39
CMC1-202ENST00000396610 IGF2P01344 180 aa0.1□□□□□ -2.39
CMC1-202ENST00000396610 SRP9P49458 86 aaKnown RBP0.1□□□□□ -2.39
CMC1-202ENST00000396610 BLCAPP62952 87 aa0.1□□□□□ -2.39
CMC1-202ENST00000396610 HRCT1Q6UXD1 115 aa0.1□□□□□ -2.39
CMC1-202ENST00000396610 C5orf56Q8N8D9 126 aa0.1□□□□□ -2.39
CMC1-202ENST00000396610 OR8J3Q8NGG0 315 aa0.1□□□□□ -2.39
CMC1-202ENST00000396610 MED31Q9Y3C7 131 aa0.1□□□□□ -2.39
CMC1-202ENST00000396610 IGF2RP11717 2491 aa0.1□□□□□ -2.39
CMC1-202ENST00000396610 IGSF10Q6WRI0 2623 aa0.1□□□□□ -2.39
CMC1-202ENST00000396610 DLC1Q96QB1 1528 aa0.09□□□□□ -2.39
CMC1-202ENST00000396610 PIK3C2AO00443 1686 aa0.09□□□□□ -2.39
CMC1-202ENST00000396610 E7EQ34 232 aa0.09□□□□□ -2.4
CMC1-202ENST00000396610 EDF1O60869 148 aaKnown RBP0.09□□□□□ -2.4
CMC1-202ENST00000396610 FAM107AO95990 144 aa0.09□□□□□ -2.4
CMC1-202ENST00000396610 CRYGSP22914 178 aa0.09□□□□□ -2.4
CMC1-202ENST00000396610 LSM3P62310 102 aaKnown RBP0.09□□□□□ -2.4
CMC1-202ENST00000396610 RHOHQ15669 191 aa0.09□□□□□ -2.4
CMC1-202ENST00000396610 LYPD5Q6UWN5 251 aa0.09□□□□□ -2.4
CMC1-202ENST00000396610 THEM6Q8WUY1 208 aa0.09□□□□□ -2.4
CMC1-202ENST00000396610 SMIM7Q9BQ49 75 aa0.09□□□□□ -2.4
CMC1-202ENST00000396610 ABCA12Q86UK0 2595 aa0.09□□□□□ -2.4
CMC1-202ENST00000396610 TRBV7-6A0A0J9YX20 115 aa0.08□□□□□ -2.4
CMC1-202ENST00000396610 FXYD1O00168 92 aa0.08□□□□□ -2.4
CMC1-202ENST00000396610 CDC42EP2O14613 210 aa0.08□□□□□ -2.4
CMC1-202ENST00000396610 TPST1O60507 370 aa0.08□□□□□ -2.4
CMC1-202ENST00000396610 IGKCP01834 107 aa0.08□□□□□ -2.4
CMC1-202ENST00000396610 CD3DP04234 171 aa0.08□□□□□ -2.4
CMC1-202ENST00000396610 ETV6P41212 452 aa0.08□□□□□ -2.4
CMC1-202ENST00000396610 OR51A4Q8NGJ6 313 aa0.08□□□□□ -2.4
CMC1-202ENST00000396610 TRAPPC2LQ9UL33 140 aa0.08□□□□□ -2.4
CMC1-202ENST00000396610 CACNA1HO95180 2353 aa0.08□□□□□ -2.4
CMC1-202ENST00000396610 SYNMO15061 1565 aa0.07□□□□□ -2.4
CMC1-202ENST00000396610 IL7P13232 177 aa0.07□□□□□ -2.4
CMC1-202ENST00000396610 IDO2Q6ZQW0 420 aa0.07□□□□□ -2.4
CMC1-202ENST00000396610 CBLN4Q9NTU7 201 aa0.07□□□□□ -2.4
CMC1-202ENST00000396610 OTOGQ6ZRI0 2925 aa0.06□□□□□ -2.4
CMC1-202ENST00000396610 A0A0G2JMM0 328 aa0.06□□□□□ -2.4
CMC1-202ENST00000396610 M0QZK8 103 aa0.06□□□□□ -2.4
CMC1-202ENST00000396610 HBDP02042 147 aa0.06□□□□□ -2.4
CMC1-202ENST00000396610 POLR2HP52434 150 aaKnown RBP0.06□□□□□ -2.4
CMC1-202ENST00000396610 IQCJQ1A5X6 159 aa0.06□□□□□ -2.4
CMC1-202ENST00000396610 DMAC1Q96GE9 116 aa0.06□□□□□ -2.4
CMC1-202ENST00000396610 MYH3P11055 1940 aa0.06□□□□□ -2.4
CMC1-202ENST00000396610 TANC2Q9HCD6 1990 aa0.06□□□□□ -2.4
CMC1-202ENST00000396610 JMJD1CQ15652 2540 aa0.06□□□□□ -2.4
CMC1-202ENST00000396610 CTTNBP2Q8WZ74 1663 aa0.05□□□□□ -2.4
CMC1-202ENST00000396610 TCOF1Q13428 1488 aaKnown RBP0.05□□□□□ -2.4
CMC1-202ENST00000396610 LOC107984640A0A0U1RRK4 108 aa0.05□□□□□ -2.4
CMC1-202ENST00000396610 RPL7P18124 248 aaKnown RBP0.05□□□□□ -2.4
CMC1-202ENST00000396610 CKS2P33552 79 aa0.05□□□□□ -2.4
CMC1-202ENST00000396610 BRK1Q8WUW1 75 aa0.05□□□□□ -2.4
CMC1-202ENST00000396610 ATG5Q9H1Y0 275 aa0.05□□□□□ -2.4
CMC1-202ENST00000396610 TTC28Q96AY4 2481 aa0.05□□□□□ -2.4
CMC1-202ENST00000396610 FAM135BQ49AJ0 1406 aa0.04□□□□□ -2.4
CMC1-202ENST00000396610 IGHV1-24A0A0C4DH33 117 aa0.04□□□□□ -2.4
CMC1-202ENST00000396610 RPL22P35268 128 aaKnown RBP0.04□□□□□ -2.4
CMC1-202ENST00000396610 OR5A2Q8NGI9 324 aa0.04□□□□□ -2.4
CMC1-202ENST00000396610 OR9Q1Q8NGQ5 310 aa0.04□□□□□ -2.4
CMC1-202ENST00000396610 NAT14Q8WUY8 206 aa0.04□□□□□ -2.4
CMC1-202ENST00000396610 TMEM14BQ9NUH8 114 aa0.04□□□□□ -2.4
CMC1-202ENST00000396610 ABCA1O95477 2261 aa0.04□□□□□ -2.4
CMC1-202ENST00000396610 ADGBQ8N7X0 1667 aa0.04□□□□□ -2.4
CMC1-202ENST00000396610 MYO7AQ13402 2215 aa0.03□□□□□ -2.4
CMC1-202ENST00000396610 CCKP06307 115 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms