RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 NPIPB6E9PJ23 425 aa11.43□□□□□ -0.58
CLTA-203ENST00000396603 CDK2AP2O75956 126 aa11.43□□□□□ -0.58
CLTA-203ENST00000396603 DEFB130BP0DP73 79 aa11.43□□□□□ -0.58
CLTA-203ENST00000396603 DEFB130AP0DP74 79 aa11.43□□□□□ -0.58
CLTA-203ENST00000396603 LEPP41159 167 aa11.43□□□□□ -0.58
CLTA-203ENST00000396603 CDKN1BP46527 198 aa11.43□□□□□ -0.58
CLTA-203ENST00000396603 C6orf223Q8N319 242 aa11.43□□□□□ -0.58
CLTA-203ENST00000396603 SUN5Q8TC36 379 aa11.43□□□□□ -0.58
CLTA-203ENST00000396603 TIMM8BQ9Y5J9 83 aaPredicted RBP11.43□□□□□ -0.58
CLTA-203ENST00000396603 LRP1BQ9NZR2 4599 aa11.43□□□□□ -0.58
CLTA-203ENST00000396603 NACAE9PAV3 2078 aa11.43□□□□□ -0.58
CLTA-203ENST00000396603 SERTM2A0A1B0GWG4 89 aa11.42□□□□□ -0.58
CLTA-203ENST00000396603 RBAKDNA6NC62 111 aa11.42□□□□□ -0.58
CLTA-203ENST00000396603 MAP1LC3B2A6NCE7 125 aa11.42□□□□□ -0.58
CLTA-203ENST00000396603 PGPA6NDG6 321 aa11.42□□□□□ -0.58
CLTA-203ENST00000396603 F5H768 121 aa11.42□□□□□ -0.58
CLTA-203ENST00000396603 H7BYZ3 331 aa11.42□□□□□ -0.58
CLTA-203ENST00000396603 SLC25A5P05141 298 aaKnown RBP11.42□□□□□ -0.58
CLTA-203ENST00000396603 ZNF575Q86XF7 245 aa11.42□□□□□ -0.58
CLTA-203ENST00000396603 C9orf62Q8N4C0 152 aa11.42□□□□□ -0.58
CLTA-203ENST00000396603 TMEM263Q8WUH6 116 aaKnown RBP11.42□□□□□ -0.58
CLTA-203ENST00000396603 TMED6Q8WW62 240 aa11.42□□□□□ -0.58
CLTA-203ENST00000396603 LINC01587Q99440 93 aa11.42□□□□□ -0.58
CLTA-203ENST00000396603 NKX6-2Q9C056 277 aaPredicted RBP11.42□□□□□ -0.58
CLTA-203ENST00000396603 MAP1LC3BQ9GZQ8 125 aa11.42□□□□□ -0.58
CLTA-203ENST00000396603 PRAC2D3DTV9 90 aa11.41□□□□□ -0.58
CLTA-203ENST00000396603 TEX46H3BTG2 121 aa11.41□□□□□ -0.58
CLTA-203ENST00000396603 K7EQM0 130 aa11.41□□□□□ -0.58
CLTA-203ENST00000396603 EIF3GO75821 320 aaKnown RBP eCLIP11.41□□□□□ -0.58
CLTA-203ENST00000396603 BTF3P20290 206 aaKnown RBP11.41□□□□□ -0.58
CLTA-203ENST00000396603 C9orf47Q6ZRZ4 202 aa11.41□□□□□ -0.58
CLTA-203ENST00000396603 FAM213BQ8TBF2 198 aa11.41□□□□□ -0.58
CLTA-203ENST00000396603 RNASE8Q8TDE3 154 aaKnown RBP11.41□□□□□ -0.58
CLTA-203ENST00000396603 TRAV12-2A0A075B6T6 113 aa11.4□□□□□ -0.58
CLTA-203ENST00000396603 A0A1W2PRE2 83 aa11.4□□□□□ -0.58
CLTA-203ENST00000396603 NMBP08949 121 aa11.4□□□□□ -0.58
CLTA-203ENST00000396603 AZU1P20160 251 aa11.4□□□□□ -0.58
CLTA-203ENST00000396603 CD300CQ08708 224 aa11.4□□□□□ -0.58
CLTA-203ENST00000396603 ZNF726P1Q15940 193 aa11.4□□□□□ -0.58
CLTA-203ENST00000396603 C5orf17Q8NAS9 161 aa11.4□□□□□ -0.58
CLTA-203ENST00000396603 TRBV7-9A0A0J9YWB2 115 aa11.39□□□□□ -0.59
CLTA-203ENST00000396603 NUDT3O95989 172 aa11.39□□□□□ -0.59
CLTA-203ENST00000396603 PRM2P04554 102 aa11.39□□□□□ -0.59
CLTA-203ENST00000396603 PPT1P50897 306 aa11.39□□□□□ -0.59
CLTA-203ENST00000396603 TTC32Q5I0X7 151 aa11.39□□□□□ -0.59
CLTA-203ENST00000396603 LINC00612Q8N6U2 182 aa11.39□□□□□ -0.59
CLTA-203ENST00000396603 SFT2D1Q8WV19 159 aa11.39□□□□□ -0.59
CLTA-203ENST00000396603 MUC4Q99102 2169 aa11.39□□□□□ -0.59
CLTA-203ENST00000396603 LENEPQ9Y5L5 61 aa11.39□□□□□ -0.59
CLTA-203ENST00000396603 ARL2-SNX15V9GYD0 113 aa11.39□□□□□ -0.59
CLTA-203ENST00000396603 IGKV2-40A0A087WW87 121 aaPredicted RBP11.38□□□□□ -0.59
CLTA-203ENST00000396603 FBLL1A6NHQ2 334 aaKnown RBP11.38□□□□□ -0.59
CLTA-203ENST00000396603 C16orf90A8MZG2 172 aa11.38□□□□□ -0.59
CLTA-203ENST00000396603 DIRC3C9JPN6 131 aa11.38□□□□□ -0.59
CLTA-203ENST00000396603 H3BNG1 76 aa11.38□□□□□ -0.59
CLTA-203ENST00000396603 IGKV2D-40P01614 121 aaPredicted RBP11.38□□□□□ -0.59
CLTA-203ENST00000396603 H2AFB1P0C5Y9 115 aa11.38□□□□□ -0.59
CLTA-203ENST00000396603 CT45A10P0DMU9 189 aa11.38□□□□□ -0.59
CLTA-203ENST00000396603 ZNF138P52744 262 aa11.38□□□□□ -0.59
CLTA-203ENST00000396603 TNP2Q05952 138 aa11.38□□□□□ -0.59
CLTA-203ENST00000396603 SSX7Q7RTT5 188 aa11.38□□□□□ -0.59
CLTA-203ENST00000396603 MBD3L1Q8WWY6 194 aa11.38□□□□□ -0.59
CLTA-203ENST00000396603 AGPAT4-IT1Q9H0P7 198 aa11.38□□□□□ -0.59
CLTA-203ENST00000396603 LINC00588Q9Y4M8 146 aa11.38□□□□□ -0.59
CLTA-203ENST00000396603 SULT1A2P50226 295 aa11.37□□□□□ -0.59
CLTA-203ENST00000396603 FGF8P55075 233 aaPredicted RBP11.37□□□□□ -0.59
CLTA-203ENST00000396603 ERCC8Q13216 396 aa11.37□□□□□ -0.59
CLTA-203ENST00000396603 TCEAL7Q9BRU2 100 aa11.37□□□□□ -0.59
CLTA-203ENST00000396603 UPK3BQ9BT76 320 aa11.37□□□□□ -0.59
CLTA-203ENST00000396603 ZNF492Q9P255 531 aa11.37□□□□□ -0.59
CLTA-203ENST00000396603 RPH3ALQ9UNE2 315 aa11.37□□□□□ -0.59
CLTA-203ENST00000396603 A0A1W2PPQ1 181 aa11.36□□□□□ -0.59
CLTA-203ENST00000396603 CRISP2P16562 243 aa11.36□□□□□ -0.59
CLTA-203ENST00000396603 FHITP49789 147 aa11.36□□□□□ -0.59
CLTA-203ENST00000396603 SUMO1P63165 101 aaKnown RBP11.36□□□□□ -0.59
CLTA-203ENST00000396603 GOLT1AQ6ZVE7 132 aa11.36□□□□□ -0.59
CLTA-203ENST00000396603 CCDC28AQ8IWP9 274 aa11.36□□□□□ -0.59
CLTA-203ENST00000396603 NDFIP1Q9BT67 221 aa11.36□□□□□ -0.59
CLTA-203ENST00000396603 NOP10Q9NPE3 64 aaKnown RBP11.36□□□□□ -0.59
CLTA-203ENST00000396603 F6UZH7 168 aa11.35□□□□□ -0.59
CLTA-203ENST00000396603 IFNA7P01567 189 aa11.35□□□□□ -0.59
CLTA-203ENST00000396603 PRB4P10163 310 aaPredicted RBP11.35□□□□□ -0.59
CLTA-203ENST00000396603 VGLL1Q99990 258 aa11.35□□□□□ -0.59
CLTA-203ENST00000396603 DNAH5Q8TE73 4624 aa11.34□□□□□ -0.59
CLTA-203ENST00000396603 C7orf71A4D174 169 aa11.34□□□□□ -0.59
CLTA-203ENST00000396603 GGTLC3B5MD39 225 aa11.34□□□□□ -0.59
CLTA-203ENST00000396603 TCRAP04437 139 aa11.34□□□□□ -0.59
CLTA-203ENST00000396603 GPX1P07203 203 aa11.34□□□□□ -0.59
CLTA-203ENST00000396603 HTN1P15515 57 aa11.34□□□□□ -0.59
CLTA-203ENST00000396603 UBE2G2P60604 165 aa11.34□□□□□ -0.59
CLTA-203ENST00000396603 GFI1BQ5VTD9 330 aa11.34□□□□□ -0.59
CLTA-203ENST00000396603 CYB561D1Q8N8Q1 229 aa11.34□□□□□ -0.59
CLTA-203ENST00000396603 HIST1H2BAQ96A08 127 aa11.34□□□□□ -0.59
CLTA-203ENST00000396603 FAM19A4Q96LR4 140 aa11.34□□□□□ -0.59
CLTA-203ENST00000396603 TMPRSS5Q9H3S3 457 aa11.34□□□□□ -0.59
CLTA-203ENST00000396603 Q9H8V8 135 aa11.34□□□□□ -0.59
CLTA-203ENST00000396603 EPDR1Q9UM22 224 aa11.34□□□□□ -0.59
CLTA-203ENST00000396603 APOBP04114 4563 aaKnown RBP11.33□□□□□ -0.6
CLTA-203ENST00000396603 TRAV1-1A0A0B4J248 108 aa11.33□□□□□ -0.6
CLTA-203ENST00000396603 FAM74A7A6NL05 159 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms