RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 FAM162BQ5T6X4 162 aa9.45□□□□□ -0.9
TRIM39-204ENST00000396548 TSKUQ8WUA8 353 aa9.45□□□□□ -0.9
TRIM39-204ENST00000396548 PHOX2AO14813 284 aa9.45□□□□□ -0.9
TRIM39-204ENST00000396548 P01737 135 aa9.45□□□□□ -0.9
TRIM39-204ENST00000396548 OR2K2Q8NGT1 345 aa9.45□□□□□ -0.9
TRIM39-204ENST00000396548 GTSF1Q8WW33 167 aa9.45□□□□□ -0.9
TRIM39-204ENST00000396548 ODF3Q96PU9 254 aa9.45□□□□□ -0.9
TRIM39-204ENST00000396548 FOXA3P55318 350 aaPredicted RBP9.45□□□□□ -0.9
TRIM39-204ENST00000396548 KCNIP4Q6PIL6 250 aa9.45□□□□□ -0.9
TRIM39-204ENST00000396548 FAM210BQ96KR6 192 aa9.45□□□□□ -0.9
TRIM39-204ENST00000396548 GFRA4Q9GZZ7 299 aa9.45□□□□□ -0.9
TRIM39-204ENST00000396548 S100PP25815 95 aa9.44□□□□□ -0.9
TRIM39-204ENST00000396548 HIST1H1AQ02539 215 aaPredicted RBP9.44□□□□□ -0.9
TRIM39-204ENST00000396548 FOXI2Q6ZQN5 318 aa9.44□□□□□ -0.9
TRIM39-204ENST00000396548 NDFIP1Q9BT67 221 aa9.44□□□□□ -0.9
TRIM39-204ENST00000396548 MAP6D1Q9H9H5 199 aa9.44□□□□□ -0.9
TRIM39-204ENST00000396548 MAST4O15021 2626 aa9.44□□□□□ -0.9
TRIM39-204ENST00000396548 AMTNQ6UX39 209 aa9.44□□□□□ -0.9
TRIM39-204ENST00000396548 Q6ZQT7 251 aa9.44□□□□□ -0.9
TRIM39-204ENST00000396548 C11orf21Q9P2W6 132 aa9.44□□□□□ -0.9
TRIM39-204ENST00000396548 KLLNB2CW77 178 aa9.43□□□□□ -0.9
TRIM39-204ENST00000396548 ZNF747Q9BV97 191 aa9.43□□□□□ -0.9
TRIM39-204ENST00000396548 DNAH3Q8TD57 4116 aa9.43□□□□□ -0.9
TRIM39-204ENST00000396548 A0A1W2PPQ1 181 aa9.43□□□□□ -0.9
TRIM39-204ENST00000396548 FAM231BA6NCW3 169 aa9.43□□□□□ -0.9
TRIM39-204ENST00000396548 RPL19P84098 196 aaKnown RBP9.43□□□□□ -0.9
TRIM39-204ENST00000396548 SAP30O75446 220 aa9.42□□□□□ -0.9
TRIM39-204ENST00000396548 BEAN1Q3B7T3 259 aa9.42□□□□□ -0.9
TRIM39-204ENST00000396548 LINC01559Q495D7 138 aa9.42□□□□□ -0.9
TRIM39-204ENST00000396548 Q6AWC8 147 aa9.42□□□□□ -0.9
TRIM39-204ENST00000396548 LURAP1LQ8IV03 231 aa9.42□□□□□ -0.9
TRIM39-204ENST00000396548 NUP35Q8NFH5 326 aa9.42□□□□□ -0.9
TRIM39-204ENST00000396548 DAZAP1Q96EP5 407 aaKnown RBP9.42□□□□□ -0.9
TRIM39-204ENST00000396548 NEU1Q99519 415 aa9.42□□□□□ -0.9
TRIM39-204ENST00000396548 FABP5P3A8MUU1 101 aa9.42□□□□□ -0.9
TRIM39-204ENST00000396548 FRMD6-AS1P0C7T7 363 aa9.42□□□□□ -0.9
TRIM39-204ENST00000396548 ODF3L2Q3SX64 289 aa9.42□□□□□ -0.9
TRIM39-204ENST00000396548 OR4C46A6NHA9 309 aa9.42□□□□□ -0.9
TRIM39-204ENST00000396548 KIR3DS1Q14943 382 aa9.42□□□□□ -0.9
TRIM39-204ENST00000396548 SRD5A3Q9H8P0 318 aa9.42□□□□□ -0.9
TRIM39-204ENST00000396548 A8MWL6 223 aa9.41□□□□□ -0.9
TRIM39-204ENST00000396548 PF4P02776 101 aa9.41□□□□□ -0.9
TRIM39-204ENST00000396548 HLA-DRB4P13762 266 aa9.41□□□□□ -0.9
TRIM39-204ENST00000396548 DEFB131AP59861 70 aa9.41□□□□□ -0.9
TRIM39-204ENST00000396548 ZNF124Q15973 351 aa9.41□□□□□ -0.9
TRIM39-204ENST00000396548 BTF3L4Q96K17 158 aa9.41□□□□□ -0.9
TRIM39-204ENST00000396548 NAT8BQ9UHF3 227 aa9.41□□□□□ -0.9
TRIM39-204ENST00000396548 HLA-DRB4X5D2U9 266 aa9.41□□□□□ -0.9
TRIM39-204ENST00000396548 IGKV3D-20A0A0C4DH25 116 aa9.41□□□□□ -0.9
TRIM39-204ENST00000396548 LINC00587B1AMM8 73 aa9.41□□□□□ -0.9
TRIM39-204ENST00000396548 GZMBP10144 247 aa9.41□□□□□ -0.9
TRIM39-204ENST00000396548 CD33P20138 364 aa9.41□□□□□ -0.9
TRIM39-204ENST00000396548 TCL1AP56279 114 aa9.41□□□□□ -0.9
TRIM39-204ENST00000396548 OR2D3Q8NGH3 330 aa9.41□□□□□ -0.9
TRIM39-204ENST00000396548 C19orf73Q9NVV2 129 aa9.41□□□□□ -0.9
TRIM39-204ENST00000396548 HIGD1CA8MV81 97 aa9.4□□□□□ -0.9
TRIM39-204ENST00000396548 H3BMM0 161 aa9.4□□□□□ -0.9
TRIM39-204ENST00000396548 CLUHP3Q96NS8 147 aa9.4□□□□□ -0.9
TRIM39-204ENST00000396548 ATRQ13535 2644 aa9.4□□□□□ -0.9
TRIM39-204ENST00000396548 RBMY1BA6NDE4 496 aaKnown RBP9.4□□□□□ -0.9
TRIM39-204ENST00000396548 RBMY1EA6NEQ0 496 aaKnown RBP9.4□□□□□ -0.9
TRIM39-204ENST00000396548 RBMY1DP0C7P1 496 aaKnown RBP9.4□□□□□ -0.9
TRIM39-204ENST00000396548 WFDC9Q8NEX5 89 aa9.4□□□□□ -0.9
TRIM39-204ENST00000396548 FAM110AQ9BQ89 295 aa9.4□□□□□ -0.9
TRIM39-204ENST00000396548 A0A1B0GXF2 115 aa9.4□□□□□ -0.91
TRIM39-204ENST00000396548 KNCNA6PVL3 124 aa9.4□□□□□ -0.91
TRIM39-204ENST00000396548 DUSP14O95147 198 aaKnown RBP9.4□□□□□ -0.91
TRIM39-204ENST00000396548 EBLN2Q6P2I7 272 aa9.4□□□□□ -0.91
TRIM39-204ENST00000396548 TMEM189A5PLL7 270 aa9.39□□□□□ -0.91
TRIM39-204ENST00000396548 ZNF324O75467 553 aaPredicted RBP9.39□□□□□ -0.91
TRIM39-204ENST00000396548 IGLC6P0CF74 106 aa9.39□□□□□ -0.91
TRIM39-204ENST00000396548 RPS10P46783 165 aaKnown RBP9.38□□□□□ -0.91
TRIM39-204ENST00000396548 ACTL10Q5JWF8 245 aa9.38□□□□□ -0.91
TRIM39-204ENST00000396548 WNK1Q9H4A3 2382 aa9.38□□□□□ -0.91
TRIM39-204ENST00000396548 AGRNO00468 2067 aa9.38□□□□□ -0.91
TRIM39-204ENST00000396548 LEPP41159 167 aa9.38□□□□□ -0.91
TRIM39-204ENST00000396548 JMJD1CQ15652 2540 aa9.38□□□□□ -0.91
TRIM39-204ENST00000396548 WIPF1O43516 503 aa9.38□□□□□ -0.91
TRIM39-204ENST00000396548 CRXO43186 299 aaPredicted RBP9.37□□□□□ -0.91
TRIM39-204ENST00000396548 TRGC2P03986 189 aa9.37□□□□□ -0.91
TRIM39-204ENST00000396548 GPX1P07203 203 aa9.37□□□□□ -0.91
TRIM39-204ENST00000396548 RNASE4P34096 147 aaKnown RBP9.37□□□□□ -0.91
TRIM39-204ENST00000396548 INSL3P51460 131 aa9.37□□□□□ -0.91
TRIM39-204ENST00000396548 RPS20P60866 119 aaKnown RBP9.37□□□□□ -0.91
TRIM39-204ENST00000396548 RASL11AQ6T310 242 aa9.37□□□□□ -0.91
TRIM39-204ENST00000396548 ATP5L2Q7Z4Y8 100 aa9.37□□□□□ -0.91
TRIM39-204ENST00000396548 TMEM136Q6ZRR5 245 aa9.37□□□□□ -0.91
TRIM39-204ENST00000396548 TRAV21A0A0B4J279 112 aa9.36□□□□□ -0.91
TRIM39-204ENST00000396548 CTRLP40313 264 aa9.36□□□□□ -0.91
TRIM39-204ENST00000396548 DNLZQ5SXM8 178 aa9.36□□□□□ -0.91
TRIM39-204ENST00000396548 GATD1Q8NB37 220 aa9.36□□□□□ -0.91
TRIM39-204ENST00000396548 PGLYRP4Q96LB8 373 aa9.36□□□□□ -0.91
TRIM39-204ENST00000396548 GNB1LQ9BYB4 327 aa9.36□□□□□ -0.91
TRIM39-204ENST00000396548 CDKN1BP46527 198 aa9.36□□□□□ -0.91
TRIM39-204ENST00000396548 GFI1BQ5VTD9 330 aa9.36□□□□□ -0.91
TRIM39-204ENST00000396548 CNFNQ9BYD5 112 aa9.36□□□□□ -0.91
TRIM39-204ENST00000396548 C7orf71A4D174 169 aa9.36□□□□□ -0.91
TRIM39-204ENST00000396548 SPINK4O60575 86 aa9.36□□□□□ -0.91
TRIM39-204ENST00000396548 C9orf66Q5T8R8 295 aa9.36□□□□□ -0.91
TRIM39-204ENST00000396548 SSBP4Q9BWG4 385 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms