RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 MRPL35Q9NZE8 188 aaKnown RBP7.62□□□□□ -1.19
CDRT1-204ENST00000395906 PRR14LQ5THK1 2151 aa7.61□□□□□ -1.19
CDRT1-204ENST00000395906 FAM240AA0A1B0GVK7 77 aa7.61□□□□□ -1.19
CDRT1-204ENST00000395906 PINLYPA6NC86 204 aa7.61□□□□□ -1.19
CDRT1-204ENST00000395906 OOEPA6NGQ2 149 aa7.61□□□□□ -1.19
CDRT1-204ENST00000395906 TCRAP04437 139 aa7.61□□□□□ -1.19
CDRT1-204ENST00000395906 CD3EP07766 207 aa7.61□□□□□ -1.19
CDRT1-204ENST00000395906 MZT1Q08AG7 82 aa7.61□□□□□ -1.19
CDRT1-204ENST00000395906 PMVKQ15126 192 aa7.61□□□□□ -1.19
CDRT1-204ENST00000395906 RNF138Q8WVD3 245 aa7.61□□□□□ -1.19
CDRT1-204ENST00000395906 FOXA2Q9Y261 457 aaPredicted RBP7.61□□□□□ -1.19
CDRT1-204ENST00000395906 TRGV11A0A075B6L2 103 aa7.61□□□□□ -1.19
CDRT1-204ENST00000395906 TMEM30CPA0ZSE6 113 aa7.61□□□□□ -1.19
CDRT1-204ENST00000395906 CKS2P33552 79 aa7.61□□□□□ -1.19
CDRT1-204ENST00000395906 CCL11P51671 97 aa7.61□□□□□ -1.19
CDRT1-204ENST00000395906 EFNA4P52798 201 aa7.61□□□□□ -1.19
CDRT1-204ENST00000395906 PKD1L2Q7Z442 2459 aa7.6□□□□□ -1.19
CDRT1-204ENST00000395906 SPTAN1Q13813 2472 aaKnown RBP7.6□□□□□ -1.19
CDRT1-204ENST00000395906 IGHV3-15A0A0B4J1V0 119 aa7.6□□□□□ -1.19
CDRT1-204ENST00000395906 ZNF785A8K8V0 405 aa7.6□□□□□ -1.19
CDRT1-204ENST00000395906 H3BMM0 161 aa7.6□□□□□ -1.19
CDRT1-204ENST00000395906 CRYGAP11844 174 aa7.6□□□□□ -1.19
CDRT1-204ENST00000395906 SRSF9Q13242 221 aaKnown RBP eCLIP7.6□□□□□ -1.19
CDRT1-204ENST00000395906 ZNF672Q499Z4 452 aaPredicted RBP7.6□□□□□ -1.19
CDRT1-204ENST00000395906 UBE2WQ96B02 151 aa7.6□□□□□ -1.19
CDRT1-204ENST00000395906 TMEM14BQ9NUH8 114 aa7.6□□□□□ -1.19
CDRT1-204ENST00000395906 TEX49A0A1B0GTD5 131 aa7.6□□□□□ -1.19
CDRT1-204ENST00000395906 SEC61GP60059 68 aa7.6□□□□□ -1.19
CDRT1-204ENST00000395906 RTL8AQ9BWD3 113 aa7.6□□□□□ -1.19
CDRT1-204ENST00000395906 PRO0628Q9UI54 55 aa7.6□□□□□ -1.19
CDRT1-204ENST00000395906 BAHCC1Q9P281 2608 aa7.59□□□□□ -1.19
CDRT1-204ENST00000395906 LRBAP50851 2863 aa7.59□□□□□ -1.19
CDRT1-204ENST00000395906 J3QT63 122 aa7.59□□□□□ -1.19
CDRT1-204ENST00000395906 FSTL3O95633 263 aa7.59□□□□□ -1.19
CDRT1-204ENST00000395906 MALP21145 153 aa7.59□□□□□ -1.19
CDRT1-204ENST00000395906 CRIP2P52943 208 aaPredicted RBP7.59□□□□□ -1.19
CDRT1-204ENST00000395906 SRSF2Q01130 221 aaKnown RBP7.59□□□□□ -1.19
CDRT1-204ENST00000395906 DPH3Q96FX2 82 aa7.59□□□□□ -1.19
CDRT1-204ENST00000395906 NXT2Q9NPJ8 142 aaKnown RBP7.59□□□□□ -1.19
CDRT1-204ENST00000395906 MAP1AP78559 2803 aaPredicted RBP7.59□□□□□ -1.19
CDRT1-204ENST00000395906 ASH1LQ9NR48 2969 aaKnown RBP7.59□□□□□ -1.19
CDRT1-204ENST00000395906 EPG5Q9HCE0 2579 aa7.59□□□□□ -1.19
CDRT1-204ENST00000395906 COX7CP15954 63 aa7.59□□□□□ -1.2
CDRT1-204ENST00000395906 HLA-DMBP28068 263 aa7.59□□□□□ -1.2
CDRT1-204ENST00000395906 Q5XG85 94 aa7.59□□□□□ -1.2
CDRT1-204ENST00000395906 PATE2Q6UY27 113 aa7.59□□□□□ -1.2
CDRT1-204ENST00000395906 DTX2Q86UW9 622 aa7.59□□□□□ -1.2
CDRT1-204ENST00000395906 Q8IYB0 196 aa7.59□□□□□ -1.2
CDRT1-204ENST00000395906 TMEM190Q8WZ59 177 aa7.59□□□□□ -1.2
CDRT1-204ENST00000395906 UCN2Q96RP3 112 aa7.59□□□□□ -1.2
CDRT1-204ENST00000395906 SCNM1Q9BWG6 230 aa7.59□□□□□ -1.2
CDRT1-204ENST00000395906 OVOL1O14753 267 aa7.58□□□□□ -1.2
CDRT1-204ENST00000395906 MRPS12O15235 138 aaKnown RBP7.58□□□□□ -1.2
CDRT1-204ENST00000395906 DEFB109BQ30KR1 87 aa7.58□□□□□ -1.2
CDRT1-204ENST00000395906 FOXB1Q99853 325 aa7.58□□□□□ -1.2
CDRT1-204ENST00000395906 TRBV6-1A0A0K0K1D8 114 aa7.58□□□□□ -1.2
CDRT1-204ENST00000395906 SMKR1H3BMG3 65 aa7.58□□□□□ -1.2
CDRT1-204ENST00000395906 NDUFA3O95167 84 aa7.58□□□□□ -1.2
CDRT1-204ENST00000395906 ROS1P08922 2347 aa7.58□□□□□ -1.2
CDRT1-204ENST00000395906 C2orf83Q53S99 150 aa7.58□□□□□ -1.2
CDRT1-204ENST00000395906 PRNTQ86SH4 94 aa7.58□□□□□ -1.2
CDRT1-204ENST00000395906 FDCSPQ8NFU4 85 aa7.58□□□□□ -1.2
CDRT1-204ENST00000395906 S1PR3Q99500 378 aa7.58□□□□□ -1.2
CDRT1-204ENST00000395906 CFAP46Q8IYW2 2715 aa7.57□□□□□ -1.2
CDRT1-204ENST00000395906 TMEM258P61165 79 aa7.57□□□□□ -1.2
CDRT1-204ENST00000395906 CD69Q07108 199 aa7.57□□□□□ -1.2
CDRT1-204ENST00000395906 CEMP1Q6PRD7 247 aaPredicted RBP7.57□□□□□ -1.2
CDRT1-204ENST00000395906 LINC00477Q96M19 166 aa7.57□□□□□ -1.2
CDRT1-204ENST00000395906 Q9H3A6 140 aa7.57□□□□□ -1.2
CDRT1-204ENST00000395906 PRO1854Q9UHT4 67 aa7.57□□□□□ -1.2
CDRT1-204ENST00000395906 ZGRF1Q86YA3 2104 aa7.57□□□□□ -1.2
CDRT1-204ENST00000395906 KMT2BQ9UMN6 2715 aaPredicted RBP7.57□□□□□ -1.2
CDRT1-204ENST00000395906 TINCRA0A1B0GVN0 87 aa7.57□□□□□ -1.2
CDRT1-204ENST00000395906 TRACP01848 142 aa7.57□□□□□ -1.2
CDRT1-204ENST00000395906 CFC1BP0CG36 223 aa7.57□□□□□ -1.2
CDRT1-204ENST00000395906 CFC1P0CG37 223 aa7.57□□□□□ -1.2
CDRT1-204ENST00000395906 MLANAQ16655 118 aa7.57□□□□□ -1.2
CDRT1-204ENST00000395906 LYZL1Q6UWQ5 148 aa7.57□□□□□ -1.2
CDRT1-204ENST00000395906 SCGB1D4Q6XE38 83 aa7.57□□□□□ -1.2
CDRT1-204ENST00000395906 LINC00305Q7Z4B0 112 aa7.57□□□□□ -1.2
CDRT1-204ENST00000395906 LINC00527Q9UJ94 153 aa7.57□□□□□ -1.2
CDRT1-204ENST00000395906 IGHV3-43A0A0B4J1X8 118 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 PROP1O75360 226 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 P0DMU3 169 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 FAM231AP0DMU4 169 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 FAM231CP0DMU5 169 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 IGHV3-43DP0DP04 118 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 CNTFRP26992 372 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 MAGEA5P43359 124 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 ATXN8Q156A1 80 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 LINC01620Q4KN68 170 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 MDP1Q86V88 176 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 SLC25A39Q9BZJ4 359 aaPredicted RBP7.56□□□□□ -1.2
CDRT1-204ENST00000395906 SVEP1Q4LDE5 3571 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 TRBV10-2A0A0K0K1G8 114 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 ZNF815PA8K554 130 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 DEFB108AA8MXU0 73 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 IGLV2-11P01706 119 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 ZNF134P52741 427 aa7.56□□□□□ -1.2
CDRT1-204ENST00000395906 SIGLEC15Q6ZMC9 328 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms