RNA–Protein interactions for RNA: ENST00000394939.3

GTF2IRD2B-201, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-201ENST00000394939 J3KRW8 73 aa8.86□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 CEBPGP53567 150 aa8.86□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 DEFB135Q30KP9 77 aa8.86□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 SMUG1Q53HV7 270 aa8.86□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 BAGE2Q86Y30 109 aa8.86□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 SPATA25Q9BR10 227 aa8.86□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 NIPSNAP3BQ9BS92 247 aa8.86□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 ZMAT4Q9H898 229 aa8.86□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 TRAV12-2A0A075B6T6 113 aa8.85□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 LTAP01374 205 aa8.85□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 SRP19P09132 144 aaKnown RBP8.85□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 GIG44P09565 113 aaPredicted RBP8.85□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 NHLRC4P0CG21 123 aaPredicted RBP8.85□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 RNASE4P34096 147 aaKnown RBP8.85□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 GNG4P50150 75 aa8.85□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 ZNF674Q2M3X9 581 aa8.85□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 SBSPONQ8IVN8 264 aa8.85□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 ZFAND2AQ8N6M9 145 aa8.85□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 RNF183Q96D59 192 aa8.85□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 SMIM12Q96EX1 92 aa8.85□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 ASCL2Q99929 193 aa8.85□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 CRXO43186 299 aaPredicted RBP8.84□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 SPRY2O43597 315 aa8.84□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 FAM74A3Q4VXF1 159 aa8.84□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 CENPWQ5EE01 88 aa8.84□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 GFI1BQ5VTD9 330 aa8.84□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 UQCC3Q6UW78 93 aa8.84□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 TMEM183AQ8IXX5 376 aa8.84□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 DERL1Q9BUN8 251 aa8.84□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 PARLQ9H300 379 aa8.84□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 BIN3Q9NQY0 253 aa8.84□□□□□ -0.99
GTF2IRD2B-201ENST00000394939 TRAV12-3A0A0B4J271 114 aa8.83□□□□□ -1
GTF2IRD2B-201ENST00000394939 TRAV21A0A0B4J279 112 aa8.83□□□□□ -1
GTF2IRD2B-201ENST00000394939 LINC00862A6NCI5 91 aa8.83□□□□□ -1
GTF2IRD2B-201ENST00000394939 ZNF727A8MUV8 499 aa8.83□□□□□ -1
GTF2IRD2B-201ENST00000394939 C9JCJ5 164 aa8.83□□□□□ -1
GTF2IRD2B-201ENST00000394939 H7BYZ3 331 aa8.83□□□□□ -1
GTF2IRD2B-201ENST00000394939 GCGP01275 180 aa8.83□□□□□ -1
GTF2IRD2B-201ENST00000394939 BTN1A1Q13410 526 aa8.83□□□□□ -1
GTF2IRD2B-201ENST00000394939 COMMD7Q86VX2 200 aa8.83□□□□□ -1
GTF2IRD2B-201ENST00000394939 CSNK1G2-AS1Q8NCQ2 148 aa8.83□□□□□ -1
GTF2IRD2B-201ENST00000394939 TVP23CQ96ET8 276 aa8.83□□□□□ -1
GTF2IRD2B-201ENST00000394939 C8orf49Q96NF6 230 aa8.83□□□□□ -1
GTF2IRD2B-201ENST00000394939 LINC01587Q99440 93 aa8.83□□□□□ -1
GTF2IRD2B-201ENST00000394939 SMIM7Q9BQ49 75 aa8.83□□□□□ -1
GTF2IRD2B-201ENST00000394939 TM2D3Q9BRN9 247 aa8.83□□□□□ -1
GTF2IRD2B-201ENST00000394939 NBEAL2Q6ZNJ1 2754 aa8.82□□□□□ -1
GTF2IRD2B-201ENST00000394939 IGHV3OR16-12A0A075B7B8 117 aa8.82□□□□□ -1
GTF2IRD2B-201ENST00000394939 SMIM9A6NGZ8 99 aa8.82□□□□□ -1
GTF2IRD2B-201ENST00000394939 PFN1P07737 140 aaKnown RBP8.82□□□□□ -1
GTF2IRD2B-201ENST00000394939 SOHLH1Q5JUK2 328 aa8.82□□□□□ -1
GTF2IRD2B-201ENST00000394939 FAM162BQ5T6X4 162 aa8.82□□□□□ -1
GTF2IRD2B-201ENST00000394939 Q6AWC8 147 aa8.82□□□□□ -1
GTF2IRD2B-201ENST00000394939 COX8CQ7Z4L0 72 aa8.82□□□□□ -1
GTF2IRD2B-201ENST00000394939 OR11H2Q8NH07 326 aa8.82□□□□□ -1
GTF2IRD2B-201ENST00000394939 PYGO2Q9BRQ0 406 aa8.82□□□□□ -1
GTF2IRD2B-201ENST00000394939 FABP5P3A8MUU1 101 aa8.81□□□□□ -1
GTF2IRD2B-201ENST00000394939 MGST1P10620 155 aaKnown RBP8.81□□□□□ -1
GTF2IRD2B-201ENST00000394939 SRSF3P84103 164 aaKnown RBP8.81□□□□□ -1
GTF2IRD2B-201ENST00000394939 KIR3DS1Q14943 382 aa8.81□□□□□ -1
GTF2IRD2B-201ENST00000394939 RRN3P1Q2M238 152 aa8.81□□□□□ -1
GTF2IRD2B-201ENST00000394939 PRR9Q5T870 116 aa8.81□□□□□ -1
GTF2IRD2B-201ENST00000394939 FAM159AQ6UWV7 190 aa8.81□□□□□ -1
GTF2IRD2B-201ENST00000394939 ZNF705AQ6ZN79 300 aaPredicted RBP8.81□□□□□ -1
GTF2IRD2B-201ENST00000394939 C1orf158Q8N1D5 194 aa8.81□□□□□ -1
GTF2IRD2B-201ENST00000394939 EIF4E3Q8N5X7 224 aaKnown RBP8.81□□□□□ -1
GTF2IRD2B-201ENST00000394939 NEU1Q99519 415 aa8.81□□□□□ -1
GTF2IRD2B-201ENST00000394939 OVOL2Q9BRP0 275 aa8.81□□□□□ -1
GTF2IRD2B-201ENST00000394939 MLST8Q9BVC4 326 aa8.81□□□□□ -1
GTF2IRD2B-201ENST00000394939 LY96Q9Y6Y9 160 aa8.81□□□□□ -1
GTF2IRD2B-201ENST00000394939 ZNF324O75467 553 aaPredicted RBP8.8□□□□□ -1
GTF2IRD2B-201ENST00000394939 MIFP14174 115 aa8.8□□□□□ -1
GTF2IRD2B-201ENST00000394939 NHLRC2Q8NBF2 726 aa8.8□□□□□ -1
GTF2IRD2B-201ENST00000394939 DAZAP1Q96EP5 407 aaKnown RBP8.8□□□□□ -1
GTF2IRD2B-201ENST00000394939 ZC2HC1AQ96GY0 325 aa8.8□□□□□ -1
GTF2IRD2B-201ENST00000394939 KCNS1Q96KK3 526 aa8.8□□□□□ -1
GTF2IRD2B-201ENST00000394939 IGHV1OR15-1A0A075B7D0 117 aa8.79□□□□□ -1
GTF2IRD2B-201ENST00000394939 C9JQL5 133 aa8.79□□□□□ -1
GTF2IRD2B-201ENST00000394939 SFTA3P0C7M3 94 aa8.79□□□□□ -1
GTF2IRD2B-201ENST00000394939 HTN1P15515 57 aa8.79□□□□□ -1
GTF2IRD2B-201ENST00000394939 TMEM241Q24JQ0 296 aa8.79□□□□□ -1
GTF2IRD2B-201ENST00000394939 LINC00467Q9BRT7 94 aa8.79□□□□□ -1
GTF2IRD2B-201ENST00000394939 RETNQ9HD89 108 aa8.79□□□□□ -1
GTF2IRD2B-201ENST00000394939 NAGKQ9UJ70 344 aa8.79□□□□□ -1
GTF2IRD2B-201ENST00000394939 TRBV20OR9-2A0A075B6H5 130 aa8.78□□□□□ -1
GTF2IRD2B-201ENST00000394939 TMEM189A5PLL7 270 aa8.78□□□□□ -1
GTF2IRD2B-201ENST00000394939 CBY3A6NI87 242 aa8.78□□□□□ -1
GTF2IRD2B-201ENST00000394939 SH2D1AO60880 128 aa8.78□□□□□ -1
GTF2IRD2B-201ENST00000394939 RBMY1A1P0DJD3 496 aaKnown RBP8.78□□□□□ -1
GTF2IRD2B-201ENST00000394939 RBMY1CP0DJD4 496 aa8.78□□□□□ -1
GTF2IRD2B-201ENST00000394939 ZNF80P51504 273 aaPredicted RBP8.78□□□□□ -1
GTF2IRD2B-201ENST00000394939 RBMY1FQ15415 496 aaKnown RBP8.78□□□□□ -1
GTF2IRD2B-201ENST00000394939 PRR27Q6MZM9 219 aa8.78□□□□□ -1
GTF2IRD2B-201ENST00000394939 ZNF493Q6ZR52 646 aa8.78□□□□□ -1
GTF2IRD2B-201ENST00000394939 SDF2L1Q9HCN8 221 aa8.78□□□□□ -1
GTF2IRD2B-201ENST00000394939 NAT8Q9UHE5 227 aa8.78□□□□□ -1
GTF2IRD2B-201ENST00000394939 TRGV11A0A075B6L2 103 aa8.77□□□□□ -1.01
GTF2IRD2B-201ENST00000394939 PGPEP1LA6NFU8 196 aa8.77□□□□□ -1.01
GTF2IRD2B-201ENST00000394939 ZNF705GA8MUZ8 300 aaPredicted RBP8.77□□□□□ -1.01
GTF2IRD2B-201ENST00000394939 IGLV2-8P01709 118 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms