RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 RHOHQ15669 191 aa10.9□□□□□ -0.67
USP49-203ENST00000394253 MCRIP2Q9BUT9 160 aaKnown RBP10.9□□□□□ -0.67
USP49-203ENST00000394253 ETDCA0A1B0GVM5 59 aa10.89□□□□□ -0.67
USP49-203ENST00000394253 TMEM256-PLSCR3K7ERE1 68 aa10.89□□□□□ -0.67
USP49-203ENST00000394253 CRYGBP07316 175 aa10.89□□□□□ -0.67
USP49-203ENST00000394253 MSRB2Q9Y3D2 182 aa10.89□□□□□ -0.67
USP49-203ENST00000394253 KLHL30-AS1Q8NEE0 82 aa10.89□□□□□ -0.67
USP49-203ENST00000394253 DKK4Q9UBT3 224 aa10.89□□□□□ -0.67
USP49-203ENST00000394253 LRP4O75096 1905 aa10.89□□□□□ -0.67
USP49-203ENST00000394253 NDPQ00604 133 aa10.89□□□□□ -0.67
USP49-203ENST00000394253 C5orf64Q2M2E5 130 aa10.89□□□□□ -0.67
USP49-203ENST00000394253 AMTNQ6UX39 209 aa10.89□□□□□ -0.67
USP49-203ENST00000394253 MRPL35Q9NZE8 188 aaKnown RBP10.89□□□□□ -0.67
USP49-203ENST00000394253 NXPH4O95158 308 aa10.89□□□□□ -0.67
USP49-203ENST00000394253 WISP3O95389 354 aaPredicted RBP10.89□□□□□ -0.67
USP49-203ENST00000394253 CR1LQ2VPA4 569 aa10.89□□□□□ -0.67
USP49-203ENST00000394253 ICOSQ9Y6W8 199 aa10.89□□□□□ -0.67
USP49-203ENST00000394253 ETV2O00321 342 aaPredicted RBP10.88□□□□□ -0.67
USP49-203ENST00000394253 TEX22C9J3V5 150 aa10.88□□□□□ -0.67
USP49-203ENST00000394253 NDUFC1O43677 76 aa10.88□□□□□ -0.67
USP49-203ENST00000394253 IGKV4-1P06312 121 aa10.88□□□□□ -0.67
USP49-203ENST00000394253 ZNF462Q96JM2 2506 aa10.88□□□□□ -0.67
USP49-203ENST00000394253 LILRA6Q6PI73 481 aa10.88□□□□□ -0.67
USP49-203ENST00000394253 RNASE6Q93091 150 aaKnown RBP10.88□□□□□ -0.67
USP49-203ENST00000394253 Q6ZWC4 215 aa10.88□□□□□ -0.67
USP49-203ENST00000394253 PYGO2Q9BRQ0 406 aa10.88□□□□□ -0.67
USP49-203ENST00000394253 ANGP03950 147 aaKnown RBP10.88□□□□□ -0.67
USP49-203ENST00000394253 IGLL1P15814 213 aa10.88□□□□□ -0.67
USP49-203ENST00000394253 STPG1Q5TH74 334 aa10.88□□□□□ -0.67
USP49-203ENST00000394253 CCL25O15444 150 aa10.87□□□□□ -0.67
USP49-203ENST00000394253 A0A0U1RQV1 116 aa10.87□□□□□ -0.67
USP49-203ENST00000394253 MRPL51Q4U2R6 128 aaKnown RBP10.87□□□□□ -0.67
USP49-203ENST00000394253 IGLL5B9A064 214 aa10.87□□□□□ -0.67
USP49-203ENST00000394253 DEFB121Q5J5C9 76 aa10.87□□□□□ -0.67
USP49-203ENST00000394253 VMO1Q7Z5L0 202 aa10.87□□□□□ -0.67
USP49-203ENST00000394253 IGHV1OR15-1A0A075B7D0 117 aa10.87□□□□□ -0.67
USP49-203ENST00000394253 TLN2Q9Y4G6 2542 aa10.87□□□□□ -0.67
USP49-203ENST00000394253 IGKV3D-7A0A0C4DH55 119 aa10.87□□□□□ -0.67
USP49-203ENST00000394253 PIP4P2Q8N4L2 257 aa10.87□□□□□ -0.67
USP49-203ENST00000394253 ATP6V0E2Q8NHE4 81 aa10.87□□□□□ -0.67
USP49-203ENST00000394253 CHCHD2Q9Y6H1 151 aaPredicted RBP10.87□□□□□ -0.67
USP49-203ENST00000394253 CD24P25063 80 aa10.87□□□□□ -0.67
USP49-203ENST00000394253 MPLKIPQ8TAP9 179 aa10.87□□□□□ -0.67
USP49-203ENST00000394253 IGHV4-28A0A0C4DH34 117 aa10.87□□□□□ -0.67
USP49-203ENST00000394253 LYRM9A8MSI8 78 aa10.87□□□□□ -0.67
USP49-203ENST00000394253 SPAARA0A1B0GVQ0 90 aa10.86□□□□□ -0.67
USP49-203ENST00000394253 WDR87Q6ZQQ6 2873 aa10.86□□□□□ -0.67
USP49-203ENST00000394253 USP17L23D6RBM5 183 aa10.86□□□□□ -0.67
USP49-203ENST00000394253 IGHV1-3A0A0C4DH29 117 aa10.86□□□□□ -0.67
USP49-203ENST00000394253 SHANK2-AS3Q9BTD1 123 aa10.86□□□□□ -0.67
USP49-203ENST00000394253 DKK1O94907 266 aa10.86□□□□□ -0.67
USP49-203ENST00000394253 GLI3P10071 1580 aa10.86□□□□□ -0.67
USP49-203ENST00000394253 UQCRQO14949 82 aa10.86□□□□□ -0.67
USP49-203ENST00000394253 COX7B2Q8TF08 81 aa10.86□□□□□ -0.67
USP49-203ENST00000394253 C3orf22Q8N5N4 141 aa10.86□□□□□ -0.67
USP49-203ENST00000394253 THSD7AQ9UPZ6 1657 aa10.85□□□□□ -0.67
USP49-203ENST00000394253 ZCCHC24Q8N2G6 241 aaKnown RBP10.85□□□□□ -0.67
USP49-203ENST00000394253 WBP1Q96G27 269 aa10.85□□□□□ -0.67
USP49-203ENST00000394253 HIVEP2P31629 2446 aa10.85□□□□□ -0.67
USP49-203ENST00000394253 TRBV12-3P01733 135 aa10.85□□□□□ -0.67
USP49-203ENST00000394253 CELA3BP08861 270 aa10.85□□□□□ -0.67
USP49-203ENST00000394253 IGHV1-8P0DP01 117 aa10.85□□□□□ -0.67
USP49-203ENST00000394253 IGHV1-2P23083 117 aa10.85□□□□□ -0.67
USP49-203ENST00000394253 SLC22A18ASQ8N1D0 253 aa10.85□□□□□ -0.67
USP49-203ENST00000394253 DYNAPQ8N1N2 210 aa10.85□□□□□ -0.67
USP49-203ENST00000394253 ZNF134P52741 427 aa10.85□□□□□ -0.67
USP49-203ENST00000394253 NRTNQ99748 197 aa10.84□□□□□ -0.67
USP49-203ENST00000394253 H0YJW9 148 aa10.84□□□□□ -0.67
USP49-203ENST00000394253 FAM201AQ5SY85 155 aa10.84□□□□□ -0.67
USP49-203ENST00000394253 Q6ZUT4 128 aa10.84□□□□□ -0.67
USP49-203ENST00000394253 RPP25Q9BUL9 199 aaKnown RBP10.84□□□□□ -0.67
USP49-203ENST00000394253 FOXE3Q13461 319 aa10.84□□□□□ -0.67
USP49-203ENST00000394253 IGKV1-5P01602 117 aa10.84□□□□□ -0.67
USP49-203ENST00000394253 RHPN1-AS1Q9BWJ2 59 aa10.84□□□□□ -0.67
USP49-203ENST00000394253 SIP14410 1827 aa10.84□□□□□ -0.67
USP49-203ENST00000394253 A6NED7 52 aa10.83□□□□□ -0.68
USP49-203ENST00000394253 C10orf105Q8TEF2 133 aa10.83□□□□□ -0.68
USP49-203ENST00000394253 IGLC7A0M8Q6 106 aa10.83□□□□□ -0.68
USP49-203ENST00000394253 IGFBP6P24592 240 aaPredicted RBP10.83□□□□□ -0.68
USP49-203ENST00000394253 TRBV19A0A075B6N1 114 aa10.83□□□□□ -0.68
USP49-203ENST00000394253 FAM236DA0A1B0GTK5 79 aa10.83□□□□□ -0.68
USP49-203ENST00000394253 FAM236CP0DP71 79 aa10.83□□□□□ -0.68
USP49-203ENST00000394253 NDUFV3P56181 108 aaKnown RBP10.83□□□□□ -0.68
USP49-203ENST00000394253 Q9H8V8 135 aa10.83□□□□□ -0.68
USP49-203ENST00000394253 C8orf86Q6ZUL3 223 aa10.83□□□□□ -0.68
USP49-203ENST00000394253 SIGLEC9Q9Y336 463 aa10.83□□□□□ -0.68
USP49-203ENST00000394253 BUB3O43684 328 aa10.82□□□□□ -0.68
USP49-203ENST00000394253 FAM231DQ6ZW35 169 aa10.82□□□□□ -0.68
USP49-203ENST00000394253 TMEM219Q86XT9 240 aa10.82□□□□□ -0.68
USP49-203ENST00000394253 ZNF503Q96F45 646 aa10.82□□□□□ -0.68
USP49-203ENST00000394253 CYTL1Q9NRR1 136 aa10.82□□□□□ -0.68
USP49-203ENST00000394253 MRPL36Q9P0J6 103 aaKnown RBP10.82□□□□□ -0.68
USP49-203ENST00000394253 DKK2Q9UBU2 259 aa10.82□□□□□ -0.68
USP49-203ENST00000394253 LHFPL1Q86WI0 220 aa10.82□□□□□ -0.68
USP49-203ENST00000394253 BDP1A6H8Y1 2624 aa10.82□□□□□ -0.68
USP49-203ENST00000394253 BRWD3Q6RI45 1802 aa10.82□□□□□ -0.68
USP49-203ENST00000394253 BUB1B-PAK6H3BSN5 160 aa10.82□□□□□ -0.68
USP49-203ENST00000394253 NTF4P34130 210 aa10.82□□□□□ -0.68
USP49-203ENST00000394253 PAX9P55771 341 aa10.82□□□□□ -0.68
USP49-203ENST00000394253 RPL18AQ02543 176 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms