RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 ETDBQ3ZM63 59 aa13.03□□□□□ -0.32
SIPA1-201ENST00000394224 HIST1H4GQ99525 98 aa13.03□□□□□ -0.32
SIPA1-201ENST00000394224 WFDC2Q14508 124 aa13.03□□□□□ -0.32
SIPA1-201ENST00000394224 FANCD2OSQ96PS1 177 aa13.03□□□□□ -0.32
SIPA1-201ENST00000394224 NCOR1P1Q9H4R4 102 aa13.03□□□□□ -0.32
SIPA1-201ENST00000394224 CYSLTR1Q9Y271 337 aa13.03□□□□□ -0.32
SIPA1-201ENST00000394224 IGKV3-20P01619 116 aa13.02□□□□□ -0.32
SIPA1-201ENST00000394224 IGHV3-11P01762 117 aa13.02□□□□□ -0.32
SIPA1-201ENST00000394224 SMIM13P0DJ93 91 aa13.02□□□□□ -0.32
SIPA1-201ENST00000394224 DTX2Q86UW9 622 aa13.02□□□□□ -0.33
SIPA1-201ENST00000394224 CHAC1Q9BUX1 264 aa13.02□□□□□ -0.33
SIPA1-201ENST00000394224 S100A4P26447 101 aaKnown RBP13.01□□□□□ -0.33
SIPA1-201ENST00000394224 ZNF502Q8TBZ5 544 aa13.01□□□□□ -0.33
SIPA1-201ENST00000394224 ARL3P36405 182 aa13.01□□□□□ -0.33
SIPA1-201ENST00000394224 C5orf64Q2M2E5 130 aa13.01□□□□□ -0.33
SIPA1-201ENST00000394224 MAPKAPK5-AS1Q8N8E1 139 aa13.01□□□□□ -0.33
SIPA1-201ENST00000394224 A0A1W2PPM0 123 aa13.01□□□□□ -0.33
SIPA1-201ENST00000394224 SEC11AP67812 179 aa13.01□□□□□ -0.33
SIPA1-201ENST00000394224 LINC00311Q8N616 119 aa13.01□□□□□ -0.33
SIPA1-201ENST00000394224 F6UB75 175 aa13□□□□□ -0.33
SIPA1-201ENST00000394224 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13□□□□□ -0.33
SIPA1-201ENST00000394224 CRYGBP07316 175 aa13□□□□□ -0.33
SIPA1-201ENST00000394224 SMIM17P0DL12 118 aa13□□□□□ -0.33
SIPA1-201ENST00000394224 RPL7P18124 248 aaKnown RBP13□□□□□ -0.33
SIPA1-201ENST00000394224 ABCA12Q86UK0 2595 aa13□□□□□ -0.33
SIPA1-201ENST00000394224 HSD52Q0P140 79 aa13□□□□□ -0.33
SIPA1-201ENST00000394224 SMAD5-AS1Q9Y6J3 95 aa13□□□□□ -0.33
SIPA1-201ENST00000394224 H7C2G1 150 aa13□□□□□ -0.33
SIPA1-201ENST00000394224 LOC107984156A0A0G2JMH3 177 aa12.99□□□□□ -0.33
SIPA1-201ENST00000394224 ARL17AQ8IVW1 177 aa12.99□□□□□ -0.33
SIPA1-201ENST00000394224 BOD1L2Q8IYS8 172 aa12.99□□□□□ -0.33
SIPA1-201ENST00000394224 C11orf21Q9P2W6 132 aa12.99□□□□□ -0.33
SIPA1-201ENST00000394224 TRBV25-1A0A075B6N4 114 aa12.99□□□□□ -0.33
SIPA1-201ENST00000394224 TMEM238C9JI98 176 aa12.99□□□□□ -0.33
SIPA1-201ENST00000394224 K7EP34 96 aa12.99□□□□□ -0.33
SIPA1-201ENST00000394224 OVOL3O00110 214 aa12.99□□□□□ -0.33
SIPA1-201ENST00000394224 IGKCP01834 107 aa12.99□□□□□ -0.33
SIPA1-201ENST00000394224 HTN1P15515 57 aa12.99□□□□□ -0.33
SIPA1-201ENST00000394224 Q8NA96 180 aa12.99□□□□□ -0.33
SIPA1-201ENST00000394224 VKORC1Q9BQB6 163 aa12.99□□□□□ -0.33
SIPA1-201ENST00000394224 FLNCQ14315 2725 aa12.99□□□□□ -0.33
SIPA1-201ENST00000394224 CTSGP08311 255 aa12.99□□□□□ -0.33
SIPA1-201ENST00000394224 ADAMTSL5Q6ZMM2 481 aa12.99□□□□□ -0.33
SIPA1-201ENST00000394224 PIP4P1Q86T03 277 aa12.99□□□□□ -0.33
SIPA1-201ENST00000394224 FABP5P3A8MUU1 101 aa12.98□□□□□ -0.33
SIPA1-201ENST00000394224 TMEM30BQ3MIR4 351 aa12.98□□□□□ -0.33
SIPA1-201ENST00000394224 C14orf178Q8N769 122 aaPredicted RBP12.98□□□□□ -0.33
SIPA1-201ENST00000394224 ZNF418Q8TF45 676 aaPredicted RBP12.98□□□□□ -0.33
SIPA1-201ENST00000394224 JMJD1CQ15652 2540 aa12.98□□□□□ -0.33
SIPA1-201ENST00000394224 INSL3P51460 131 aa12.98□□□□□ -0.33
SIPA1-201ENST00000394224 PVRIGQ6DKI7 326 aa12.98□□□□□ -0.33
SIPA1-201ENST00000394224 TMEM14CQ9P0S9 112 aa12.98□□□□□ -0.33
SIPA1-201ENST00000394224 APOMO95445 188 aa12.98□□□□□ -0.33
SIPA1-201ENST00000394224 PAX2Q02962 417 aa12.98□□□□□ -0.33
SIPA1-201ENST00000394224 LY6EQ16553 131 aa12.98□□□□□ -0.33
SIPA1-201ENST00000394224 VMO1Q7Z5L0 202 aa12.98□□□□□ -0.33
SIPA1-201ENST00000394224 IGHV3-64A0A075B6Q5 118 aa12.97□□□□□ -0.33
SIPA1-201ENST00000394224 H3BRM9 83 aa12.97□□□□□ -0.33
SIPA1-201ENST00000394224 MYOZ3Q8TDC0 251 aa12.97□□□□□ -0.33
SIPA1-201ENST00000394224 ATP5G2Q06055 141 aa12.97□□□□□ -0.33
SIPA1-201ENST00000394224 SCGB1D4Q6XE38 83 aa12.97□□□□□ -0.33
SIPA1-201ENST00000394224 INS-IGF2F8WCM5 200 aa12.96□□□□□ -0.33
SIPA1-201ENST00000394224 BMI1P35226 326 aa12.96□□□□□ -0.33
SIPA1-201ENST00000394224 SMIM12Q96EX1 92 aa12.96□□□□□ -0.33
SIPA1-201ENST00000394224 TSSC4Q9Y5U2 329 aaPredicted RBP12.96□□□□□ -0.33
SIPA1-201ENST00000394224 B9A039 149 aa12.96□□□□□ -0.33
SIPA1-201ENST00000394224 LGALS9BQ3B8N2 356 aa12.96□□□□□ -0.33
SIPA1-201ENST00000394224 LGALS9CQ6DKI2 356 aa12.96□□□□□ -0.33
SIPA1-201ENST00000394224 AGPAT4-IT1Q9H0P7 198 aa12.96□□□□□ -0.33
SIPA1-201ENST00000394224 BRD3OSQ6XYD6 125 aa12.96□□□□□ -0.34
SIPA1-201ENST00000394224 RPL39LQ96EH5 51 aaKnown RBP12.96□□□□□ -0.34
SIPA1-201ENST00000394224 C16orf92Q96LL3 132 aa12.96□□□□□ -0.34
SIPA1-201ENST00000394224 WI2-2373I1.2A0A1W2PRP0 233 aa12.95□□□□□ -0.34
SIPA1-201ENST00000394224 CD300EQ496F6 205 aaPredicted RBP12.95□□□□□ -0.34
SIPA1-201ENST00000394224 TMEM78Q5T7P6 136 aa12.95□□□□□ -0.34
SIPA1-201ENST00000394224 ZNF562Q6V9R5 426 aa12.95□□□□□ -0.34
SIPA1-201ENST00000394224 KLHL30-AS1Q8NEE0 82 aa12.95□□□□□ -0.34
SIPA1-201ENST00000394224 F8W735 103 aaPredicted RBP12.95□□□□□ -0.34
SIPA1-201ENST00000394224 ATP6V0E1O15342 81 aa12.95□□□□□ -0.34
SIPA1-201ENST00000394224 ODF1Q14990 250 aa12.95□□□□□ -0.34
SIPA1-201ENST00000394224 TIMD4Q96H15 378 aa12.95□□□□□ -0.34
SIPA1-201ENST00000394224 NPFFR1Q9GZQ6 430 aa12.95□□□□□ -0.34
SIPA1-201ENST00000394224 IGKV3D-20A0A0C4DH25 116 aa12.94□□□□□ -0.34
SIPA1-201ENST00000394224 F5H697 171 aa12.94□□□□□ -0.34
SIPA1-201ENST00000394224 PPBPP02775 128 aa12.94□□□□□ -0.34
SIPA1-201ENST00000394224 FAM74A4Q5TZK3 123 aa12.94□□□□□ -0.34
SIPA1-201ENST00000394224 RNF185Q96GF1 192 aa12.94□□□□□ -0.34
SIPA1-201ENST00000394224 COL25A1Q9BXS0 654 aaPredicted RBP12.94□□□□□ -0.34
SIPA1-201ENST00000394224 TNFRSF13BO14836 293 aaPredicted RBP12.94□□□□□ -0.34
SIPA1-201ENST00000394224 ZFP36P26651 326 aaKnown RBP12.94□□□□□ -0.34
SIPA1-201ENST00000394224 CEACAM3P40198 252 aa12.94□□□□□ -0.34
SIPA1-201ENST00000394224 SRSF9Q13242 221 aaKnown RBP eCLIP12.94□□□□□ -0.34
SIPA1-201ENST00000394224 ZNF479Q96JC4 524 aa12.94□□□□□ -0.34
SIPA1-201ENST00000394224 MRPS12O15235 138 aaKnown RBP12.93□□□□□ -0.34
SIPA1-201ENST00000394224 CEACAM4O75871 244 aa12.93□□□□□ -0.34
SIPA1-201ENST00000394224 LRRK2Q5S007 2527 aa12.93□□□□□ -0.34
SIPA1-201ENST00000394224 DPM2O94777 84 aa12.93□□□□□ -0.34
SIPA1-201ENST00000394224 IGHG4P01861 327 aa12.93□□□□□ -0.34
SIPA1-201ENST00000394224 LINC00477Q96M19 166 aa12.93□□□□□ -0.34
SIPA1-201ENST00000394224 AZU1P20160 251 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms