RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 PMCHL1Q16048 86 aa6.89□□□□□ -1.31
TDP1-202ENST00000393452 LCNL1Q6ZST4 164 aa6.89□□□□□ -1.31
TDP1-202ENST00000393452 MIEN1Q9BRT3 115 aa6.89□□□□□ -1.31
TDP1-202ENST00000393452 LENEPQ9Y5L5 61 aa6.89□□□□□ -1.31
TDP1-202ENST00000393452 KRTAP10-9P60411 292 aa6.88□□□□□ -1.31
TDP1-202ENST00000393452 NUTF2P61970 127 aaKnown RBP6.88□□□□□ -1.31
TDP1-202ENST00000393452 AMN1Q8IY45 258 aa6.88□□□□□ -1.31
TDP1-202ENST00000393452 C20orf173Q96LM9 149 aa6.88□□□□□ -1.31
TDP1-202ENST00000393452 TMEM70Q9BUB7 260 aa6.88□□□□□ -1.31
TDP1-202ENST00000393452 BEX4Q9NWD9 120 aaPredicted RBP6.88□□□□□ -1.31
TDP1-202ENST00000393452 C11orf21Q9P2W6 132 aa6.88□□□□□ -1.31
TDP1-202ENST00000393452 IGHV7-4-1A0A0J9YVY3 117 aa6.88□□□□□ -1.31
TDP1-202ENST00000393452 TMEM89A2RUT3 159 aa6.88□□□□□ -1.31
TDP1-202ENST00000393452 RNF223E7ERA6 249 aa6.88□□□□□ -1.31
TDP1-202ENST00000393452 J3QKU1 62 aa6.88□□□□□ -1.31
TDP1-202ENST00000393452 IGHV4-31P0DP07 118 aa6.88□□□□□ -1.31
TDP1-202ENST00000393452 MAJINQ3KP22 176 aa6.88□□□□□ -1.31
TDP1-202ENST00000393452 LRRC75A-AS1Q8N1F1 130 aa6.88□□□□□ -1.31
TDP1-202ENST00000393452 MAPK1IP1LQ8NDC0 245 aa6.88□□□□□ -1.31
TDP1-202ENST00000393452 TMEM191AQ9H0A3 160 aa6.88□□□□□ -1.31
TDP1-202ENST00000393452 DAZ1Q9NQZ3 744 aaKnown RBP6.88□□□□□ -1.31
TDP1-202ENST00000393452 AP5S1Q9NUS5 200 aa6.88□□□□□ -1.31
TDP1-202ENST00000393452 CREBBPQ92793 2442 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 MUC21A0A0G2JKD1 596 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 MUC21A0A140T8X8 626 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 D6R8Y8 96 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 K7EMT4 169 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 EREGO14944 169 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 LEPROTL1O95214 131 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 TWIST1Q15672 202 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 DEFB113Q30KQ7 82 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 MRPL51Q4U2R6 128 aaKnown RBP6.87□□□□□ -1.31
TDP1-202ENST00000393452 MUC21Q5SSG8 566 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 ORMDL3Q8N138 153 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 PEF1Q9UBV8 284 aaKnown RBP6.87□□□□□ -1.31
TDP1-202ENST00000393452 CSMD2Q7Z408 3487 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 DOPEY2Q9Y3R5 2298 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 NAV2Q8IVL1 2488 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 CSN3P07498 182 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 SPATA45Q537H7 98 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 LINC00173Q6ZV60 143 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 SPATA12Q7Z6I5 190 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 MRPL52Q86TS9 123 aaKnown RBP6.87□□□□□ -1.31
TDP1-202ENST00000393452 ZNF738Q8NE65 137 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 LINC00477Q96M19 166 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 PRELID3AQ96N28 172 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 RHPN1-AS1Q9BWJ2 59 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 SNHG12Q9BXW3 62 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 MSRB1Q9NZV6 116 aa6.87□□□□□ -1.31
TDP1-202ENST00000393452 SYS1-DBNDD2H3BUS1 97 aa6.86□□□□□ -1.31
TDP1-202ENST00000393452 OVOL1O14753 267 aa6.86□□□□□ -1.31
TDP1-202ENST00000393452 TM4SF20Q53R12 229 aa6.86□□□□□ -1.31
TDP1-202ENST00000393452 Q6YL49 198 aa6.86□□□□□ -1.31
TDP1-202ENST00000393452 RNF185Q96GF1 192 aa6.86□□□□□ -1.31
TDP1-202ENST00000393452 SMPXQ9UHP9 88 aa6.86□□□□□ -1.31
TDP1-202ENST00000393452 VPREB3Q9UKI3 123 aa6.86□□□□□ -1.31
TDP1-202ENST00000393452 GCN1Q92616 2671 aaKnown RBP6.86□□□□□ -1.31
TDP1-202ENST00000393452 IFI27P40305 119 aaPredicted RBP6.86□□□□□ -1.31
TDP1-202ENST00000393452 ZFAND2AQ8N6M9 145 aa6.86□□□□□ -1.31
TDP1-202ENST00000393452 PRSS3P2Q8NHM4 247 aa6.86□□□□□ -1.31
TDP1-202ENST00000393452 SIGLEC8Q9NYZ4 499 aa6.86□□□□□ -1.31
TDP1-202ENST00000393452 ZANQ9Y493 2812 aa6.85□□□□□ -1.31
TDP1-202ENST00000393452 TRAV9-2A0A087WT02 112 aa6.85□□□□□ -1.31
TDP1-202ENST00000393452 C20orf202A1L168 122 aa6.85□□□□□ -1.31
TDP1-202ENST00000393452 M0R143 59 aa6.85□□□□□ -1.31
TDP1-202ENST00000393452 PPBPP02775 128 aa6.85□□□□□ -1.31
TDP1-202ENST00000393452 IGLC3P0DOY3 106 aa6.85□□□□□ -1.31
TDP1-202ENST00000393452 FOXE3Q13461 319 aa6.85□□□□□ -1.31
TDP1-202ENST00000393452 FAM106AQ4KMX7 169 aa6.85□□□□□ -1.31
TDP1-202ENST00000393452 Q5PR19 223 aa6.85□□□□□ -1.31
TDP1-202ENST00000393452 PRR9Q5T870 116 aa6.85□□□□□ -1.31
TDP1-202ENST00000393452 ZNF705AQ6ZN79 300 aaPredicted RBP6.85□□□□□ -1.31
TDP1-202ENST00000393452 FA2HQ7L5A8 372 aa6.85□□□□□ -1.31
TDP1-202ENST00000393452 ATOH7Q8N100 152 aa6.85□□□□□ -1.31
TDP1-202ENST00000393452 FAM19A4Q96LR4 140 aa6.85□□□□□ -1.31
TDP1-202ENST00000393452 HSPB8Q9UJY1 196 aa6.85□□□□□ -1.31
TDP1-202ENST00000393452 ABCA12Q86UK0 2595 aa6.85□□□□□ -1.31
TDP1-202ENST00000393452 IGHV4-4A0A075B6R2 117 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 A0A096LNJ9 63 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 TRBV7-9A0A0J9YWB2 115 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 SNAI2O43623 268 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 CENPEQ02224 2701 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 C10orf99Q6UWK7 81 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 KLHDC1Q8N7A1 406 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 OR10J6PQ8NGY7 276 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 MYOZ3Q8TDC0 251 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 NPYP01303 97 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 CKS2P33552 79 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 PET117Q6UWS5 81 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 Q6ZQT7 251 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 KRTAP1-3Q8IUG1 177 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 APRG1Q8IVJ8 170 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 OR10AG1Q8NH19 301 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 ZNF747Q9BV97 191 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 UQCR10Q9UDW1 63 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 LAMTOR2Q9Y2Q5 125 aa6.84□□□□□ -1.31
TDP1-202ENST00000393452 G0S2P27469 103 aa6.83□□□□□ -1.32
TDP1-202ENST00000393452 SAMD13Q5VXD3 122 aa6.83□□□□□ -1.32
TDP1-202ENST00000393452 PRSS57Q6UWY2 283 aa6.83□□□□□ -1.32
TDP1-202ENST00000393452 OR8A1Q8NGG7 326 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms