RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 METTL26Q96S19 204 aa14.46□□□□□ -0.09
CBX1-202ENST00000393408 IGHV3-49A0A0A0MS15 119 aa14.46□□□□□ -0.09
CBX1-202ENST00000393408 GAGE12BA1L429 117 aa14.46□□□□□ -0.09
CBX1-202ENST00000393408 KIR3DS1Q14943 382 aa14.46□□□□□ -0.09
CBX1-202ENST00000393408 RNF151Q2KHN1 245 aa14.46□□□□□ -0.09
CBX1-202ENST00000393408 TMEM78Q5T7P6 136 aa14.46□□□□□ -0.09
CBX1-202ENST00000393408 C8orf86Q6ZUL3 223 aa14.46□□□□□ -0.09
CBX1-202ENST00000393408 JMJD8Q96S16 334 aa14.46□□□□□ -0.09
CBX1-202ENST00000393408 HHLA3Q9XRX5 114 aa14.46□□□□□ -0.09
CBX1-202ENST00000393408 U3KQE9 123 aa14.46□□□□□ -0.09
CBX1-202ENST00000393408 NBASA2RRP1 2371 aa14.45□□□□□ -0.1
CBX1-202ENST00000393408 TRBV7-1A0A0A6YYK4 115 aa14.45□□□□□ -0.1
CBX1-202ENST00000393408 IGHV7-4-1A0A0J9YVY3 117 aa14.45□□□□□ -0.1
CBX1-202ENST00000393408 CENPVL3A0A0U1RRI6 287 aa14.45□□□□□ -0.1
CBX1-202ENST00000393408 ZNF207O43670 478 aaKnown RBP14.45□□□□□ -0.1
CBX1-202ENST00000393408 UFSP1Q6NVU6 142 aa14.45□□□□□ -0.1
CBX1-202ENST00000393408 MED13LQ71F56 2210 aa14.45□□□□□ -0.1
CBX1-202ENST00000393408 PSMG4Q5JS54 123 aa14.45□□□□□ -0.1
CBX1-202ENST00000393408 OR2K2Q8NGT1 345 aa14.45□□□□□ -0.1
CBX1-202ENST00000393408 TMEM158Q8WZ71 300 aa14.45□□□□□ -0.1
CBX1-202ENST00000393408 HIF1ANQ9NWT6 349 aa14.45□□□□□ -0.1
CBX1-202ENST00000393408 RAXQ9Y2V3 346 aa14.45□□□□□ -0.1
CBX1-202ENST00000393408 GAGE10A6NGK3 116 aa14.44□□□□□ -0.1
CBX1-202ENST00000393408 UCNP55089 124 aa14.44□□□□□ -0.1
CBX1-202ENST00000393408 C9orf47Q6ZRZ4 202 aa14.44□□□□□ -0.1
CBX1-202ENST00000393408 PRSS1P07477 247 aa14.44□□□□□ -0.1
CBX1-202ENST00000393408 AP1S3Q96PC3 154 aa14.44□□□□□ -0.1
CBX1-202ENST00000393408 IGKV2D-26A0A0A0MRZ7 120 aa14.43□□□□□ -0.1
CBX1-202ENST00000393408 LMO4P61968 165 aa14.43□□□□□ -0.1
CBX1-202ENST00000393408 C5orf56Q8N8D9 126 aa14.43□□□□□ -0.1
CBX1-202ENST00000393408 NRACQ8N912 160 aa14.43□□□□□ -0.1
CBX1-202ENST00000393408 PRSS47A8MTI9 375 aa14.43□□□□□ -0.1
CBX1-202ENST00000393408 EFNA4P52798 201 aa14.43□□□□□ -0.1
CBX1-202ENST00000393408 H3BUT2 72 aa14.42□□□□□ -0.1
CBX1-202ENST00000393408 NPFFO15130 113 aa14.42□□□□□ -0.1
CBX1-202ENST00000393408 IGKCP01834 107 aa14.42□□□□□ -0.1
CBX1-202ENST00000393408 FOXC2Q99958 501 aa14.42□□□□□ -0.1
CBX1-202ENST00000393408 IGHV4-4A0A075B6R2 117 aa14.42□□□□□ -0.1
CBX1-202ENST00000393408 A0A0G2JLM5 398 aa14.42□□□□□ -0.1
CBX1-202ENST00000393408 Q6ZQT7 251 aa14.42□□□□□ -0.1
CBX1-202ENST00000393408 GTF2H5Q6ZYL4 71 aa14.42□□□□□ -0.1
CBX1-202ENST00000393408 SMIM15Q7Z3B0 74 aa14.42□□□□□ -0.1
CBX1-202ENST00000393408 UBTD1Q9HAC8 227 aa14.42□□□□□ -0.1
CBX1-202ENST00000393408 ATP5LO75964 103 aa14.41□□□□□ -0.1
CBX1-202ENST00000393408 ATP5G2Q06055 141 aa14.41□□□□□ -0.1
CBX1-202ENST00000393408 SMPXQ9UHP9 88 aa14.41□□□□□ -0.1
CBX1-202ENST00000393408 HIGD1BQ9P298 99 aa14.41□□□□□ -0.1
CBX1-202ENST00000393408 CACNA1BQ00975 2339 aa14.4□□□□□ -0.1
CBX1-202ENST00000393408 ASH1LQ9NR48 2969 aaKnown RBP14.4□□□□□ -0.1
CBX1-202ENST00000393408 SMIM17P0DL12 118 aa14.4□□□□□ -0.1
CBX1-202ENST00000393408 NAA38Q9BRA0 125 aaKnown RBP14.4□□□□□ -0.1
CBX1-202ENST00000393408 BPESC1Q9GZL8 116 aa14.4□□□□□ -0.1
CBX1-202ENST00000393408 TRAV26-2A0A0B4J265 109 aa14.4□□□□□ -0.1
CBX1-202ENST00000393408 K7EP34 96 aa14.4□□□□□ -0.1
CBX1-202ENST00000393408 DPM2O94777 84 aa14.4□□□□□ -0.1
CBX1-202ENST00000393408 TTTY13Q9BZ97 58 aa14.4□□□□□ -0.1
CBX1-202ENST00000393408 UFC1Q9Y3C8 167 aa14.4□□□□□ -0.1
CBX1-202ENST00000393408 RAB37Q96AX2 223 aa14.39□□□□□ -0.11
CBX1-202ENST00000393408 ATRXP46100 2492 aa14.39□□□□□ -0.11
CBX1-202ENST00000393408 LAGE3Q14657 143 aa14.39□□□□□ -0.11
CBX1-202ENST00000393408 C19orf54Q5BKX5 351 aa14.39□□□□□ -0.11
CBX1-202ENST00000393408 PRR9Q5T870 116 aa14.39□□□□□ -0.11
CBX1-202ENST00000393408 ATP6V0BQ99437 205 aa14.39□□□□□ -0.11
CBX1-202ENST00000393408 IGF2RP11717 2491 aa14.38□□□□□ -0.11
CBX1-202ENST00000393408 TMEM8BA6NDV4 472 aa14.38□□□□□ -0.11
CBX1-202ENST00000393408 SPANXN1Q5VSR9 72 aa14.38□□□□□ -0.11
CBX1-202ENST00000393408 TMEM219Q86XT9 240 aa14.38□□□□□ -0.11
CBX1-202ENST00000393408 GLMPQ8WWB7 406 aa14.38□□□□□ -0.11
CBX1-202ENST00000393408 C16orf92Q96LL3 132 aa14.38□□□□□ -0.11
CBX1-202ENST00000393408 TM4SF20Q53R12 229 aa14.37□□□□□ -0.11
CBX1-202ENST00000393408 GTSCR1Q86UQ5 136 aa14.37□□□□□ -0.11
CBX1-202ENST00000393408 ITLN2Q8WWU7 325 aaPredicted RBP14.37□□□□□ -0.11
CBX1-202ENST00000393408 C20orf173Q96LM9 149 aa14.37□□□□□ -0.11
CBX1-202ENST00000393408 TRAV41A0A0B4J266 112 aa14.37□□□□□ -0.11
CBX1-202ENST00000393408 ZC2HC1BQ5TFG8 222 aa14.37□□□□□ -0.11
CBX1-202ENST00000393408 FAM223BA6NKX1 122 aa14.36□□□□□ -0.11
CBX1-202ENST00000393408 H3BVH4 76 aa14.36□□□□□ -0.11
CBX1-202ENST00000393408 C9orf139Q6ZV77 190 aa14.36□□□□□ -0.11
CBX1-202ENST00000393408 FAM223AQ8IWN6 122 aa14.36□□□□□ -0.11
CBX1-202ENST00000393408 VPS25Q9BRG1 176 aa14.36□□□□□ -0.11
CBX1-202ENST00000393408 CHAC1Q9BUX1 264 aa14.36□□□□□ -0.11
CBX1-202ENST00000393408 LENEPQ9Y5L5 61 aa14.36□□□□□ -0.11
CBX1-202ENST00000393408 SVEP1Q4LDE5 3571 aa14.36□□□□□ -0.11
CBX1-202ENST00000393408 A0A1W2PPM0 123 aa14.36□□□□□ -0.11
CBX1-202ENST00000393408 K7ERU9 68 aa14.36□□□□□ -0.11
CBX1-202ENST00000393408 HLA-DRB4P13762 266 aa14.36□□□□□ -0.11
CBX1-202ENST00000393408 MYOZ3Q8TDC0 251 aa14.36□□□□□ -0.11
CBX1-202ENST00000393408 MOB4Q9Y3A3 225 aa14.36□□□□□ -0.11
CBX1-202ENST00000393408 HLA-DRB4X5D2U9 266 aa14.36□□□□□ -0.11
CBX1-202ENST00000393408 FXYD2P54710 66 aa14.35□□□□□ -0.11
CBX1-202ENST00000393408 MRPL35Q9NZE8 188 aaKnown RBP14.35□□□□□ -0.11
CBX1-202ENST00000393408 LINC00527Q9UJ94 153 aa14.35□□□□□ -0.11
CBX1-202ENST00000393408 SPTBN1Q01082 2364 aaKnown RBP14.35□□□□□ -0.11
CBX1-202ENST00000393408 TRBV25-1A0A075B6N4 114 aa14.35□□□□□ -0.11
CBX1-202ENST00000393408 GCSHP23434 173 aa14.35□□□□□ -0.11
CBX1-202ENST00000393408 MRAP2Q96G30 205 aa14.35□□□□□ -0.11
CBX1-202ENST00000393408 TMEM160Q9NX00 188 aa14.35□□□□□ -0.11
CBX1-202ENST00000393408 TRAV40A0A0B4J280 105 aa14.34□□□□□ -0.11
CBX1-202ENST00000393408 IGF1P05019 195 aa14.34□□□□□ -0.11
CBX1-202ENST00000393408 CRIP2P52943 208 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms