RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 PRR25Q96S07 402 aa6.33□□□□□ -1.4
ATXN3-203ENST00000393287 CHTOPQ9Y3Y2 248 aaKnown RBP6.33□□□□□ -1.4
ATXN3-203ENST00000393287 TRBV7-9A0A0J9YWB2 115 aa6.33□□□□□ -1.4
ATXN3-203ENST00000393287 CRXO43186 299 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-203ENST00000393287 LINC00614P0C842 121 aa6.33□□□□□ -1.4
ATXN3-203ENST00000393287 MED14OSP0DP75 135 aa6.33□□□□□ -1.4
ATXN3-203ENST00000393287 IL15RAQ13261 267 aa6.33□□□□□ -1.4
ATXN3-203ENST00000393287 K7EMI3 77 aa6.33□□□□□ -1.4
ATXN3-203ENST00000393287 LY6G6DO95868 133 aa6.33□□□□□ -1.4
ATXN3-203ENST00000393287 RHOHQ15669 191 aa6.33□□□□□ -1.4
ATXN3-203ENST00000393287 DNLZQ5SXM8 178 aa6.33□□□□□ -1.4
ATXN3-203ENST00000393287 GZMBP10144 247 aa6.32□□□□□ -1.4
ATXN3-203ENST00000393287 ODF3Q96PU9 254 aa6.32□□□□□ -1.4
ATXN3-203ENST00000393287 KLK5Q9Y337 293 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-203ENST00000393287 C2orf70A6NJV1 201 aa6.32□□□□□ -1.4
ATXN3-203ENST00000393287 DPM2O94777 84 aa6.32□□□□□ -1.4
ATXN3-203ENST00000393287 MLANAQ16655 118 aa6.32□□□□□ -1.4
ATXN3-203ENST00000393287 DMRTA1Q5VZB9 504 aa6.32□□□□□ -1.4
ATXN3-203ENST00000393287 IGKV3OR2-268A0A0C4DH90 116 aa6.32□□□□□ -1.4
ATXN3-203ENST00000393287 I3L3M4 83 aa6.32□□□□□ -1.4
ATXN3-203ENST00000393287 FXYD7P58549 80 aa6.32□□□□□ -1.4
ATXN3-203ENST00000393287 HILS1P60008 231 aa6.32□□□□□ -1.4
ATXN3-203ENST00000393287 IGHV4OR15-8A0A075B7B6 117 aa6.32□□□□□ -1.4
ATXN3-203ENST00000393287 A0A087WW49 117 aa6.32□□□□□ -1.4
ATXN3-203ENST00000393287 LTAP01374 205 aa6.32□□□□□ -1.4
ATXN3-203ENST00000393287 RNF224P0DH78 156 aa6.32□□□□□ -1.4
ATXN3-203ENST00000393287 KLK15Q9H2R5 256 aa6.32□□□□□ -1.4
ATXN3-203ENST00000393287 XCL2Q9UBD3 114 aa6.32□□□□□ -1.4
ATXN3-203ENST00000393287 HIST1H4GQ99525 98 aa6.32□□□□□ -1.4
ATXN3-203ENST00000393287 SLURP1P55000 103 aa6.31□□□□□ -1.4
ATXN3-203ENST00000393287 CTSGP08311 255 aa6.31□□□□□ -1.4
ATXN3-203ENST00000393287 ZNF876PQ49A33 203 aa6.31□□□□□ -1.4
ATXN3-203ENST00000393287 ZNF580Q9UK33 172 aa6.31□□□□□ -1.4
ATXN3-203ENST00000393287 F5H768 121 aa6.31□□□□□ -1.4
ATXN3-203ENST00000393287 SPINK13Q1W4C9 94 aa6.31□□□□□ -1.4
ATXN3-203ENST00000393287 RNF182Q8N6D2 247 aa6.31□□□□□ -1.4
ATXN3-203ENST00000393287 NUP35Q8NFH5 326 aa6.31□□□□□ -1.4
ATXN3-203ENST00000393287 Q8TAT8 98 aa6.31□□□□□ -1.4
ATXN3-203ENST00000393287 MTORP42345 2549 aa6.31□□□□□ -1.4
ATXN3-203ENST00000393287 PLNP26678 52 aa6.31□□□□□ -1.4
ATXN3-203ENST00000393287 ADMP35318 185 aa6.31□□□□□ -1.4
ATXN3-203ENST00000393287 KNCNA6PVL3 124 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 VWC2LB2RUY7 222 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 ARMS2P0C7Q2 107 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 SPART-AS1P0CW21 52 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 BLCAPP62952 87 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 SMAD5-AS1Q9Y6J3 95 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 CSTL1Q9H114 145 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 ABCA12Q86UK0 2595 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 TLN2Q9Y4G6 2542 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 A0A1W2PPR1 153 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 TCTAP57738 103 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 KIAA1644Q3SXP7 199 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 TP53BP1Q12888 1972 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-203ENST00000393287 CXCL1P09341 107 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 FOXA3P55318 350 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-203ENST00000393287 PRR31Q5SQ13 230 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 VPS25Q9BRG1 176 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 TRANK1O15050 2925 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 INAFM1C9JVW0 142 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 IGKCP01834 107 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 CFHR4Q92496 578 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 C20orf78Q9BR46 151 aa6.3□□□□□ -1.4
ATXN3-203ENST00000393287 SMIM9A6NGZ8 99 aa6.29□□□□□ -1.4
ATXN3-203ENST00000393287 CRYGBP07316 175 aa6.29□□□□□ -1.4
ATXN3-203ENST00000393287 CKS1BP61024 79 aa6.29□□□□□ -1.4
ATXN3-203ENST00000393287 FNDC4Q9H6D8 234 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-203ENST00000393287 D6R8Y8 96 aa6.29□□□□□ -1.4
ATXN3-203ENST00000393287 DEFB130BP0DP73 79 aa6.29□□□□□ -1.4
ATXN3-203ENST00000393287 DEFB130AP0DP74 79 aa6.29□□□□□ -1.4
ATXN3-203ENST00000393287 IGLV2-14P01704 120 aa6.29□□□□□ -1.4
ATXN3-203ENST00000393287 ANXA2RQ3ZCQ2 193 aa6.29□□□□□ -1.4
ATXN3-203ENST00000393287 C9orf47Q6ZRZ4 202 aa6.29□□□□□ -1.4
ATXN3-203ENST00000393287 Q8N8P6 123 aa6.29□□□□□ -1.4
ATXN3-203ENST00000393287 IGF2BP2-AS1Q96M15 143 aa6.29□□□□□ -1.4
ATXN3-203ENST00000393287 BUB3O43684 328 aa6.28□□□□□ -1.4
ATXN3-203ENST00000393287 SFTA2Q6UW10 78 aa6.28□□□□□ -1.4
ATXN3-203ENST00000393287 TMEM243Q9BU79 118 aa6.28□□□□□ -1.4
ATXN3-203ENST00000393287 ICOSQ9Y6W8 199 aa6.28□□□□□ -1.4
ATXN3-203ENST00000393287 NCKAP5O14513 1909 aa6.28□□□□□ -1.4
ATXN3-203ENST00000393287 SMIM27A0A1W2PRY6 76 aa6.28□□□□□ -1.4
ATXN3-203ENST00000393287 BCL6BQ8N143 479 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-203ENST00000393287 C8orf49Q96NF6 230 aa6.28□□□□□ -1.4
ATXN3-203ENST00000393287 CITED2Q99967 270 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-203ENST00000393287 ATP5G1P05496 136 aa6.28□□□□□ -1.4
ATXN3-203ENST00000393287 MDKP21741 143 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-203ENST00000393287 RPL24P83731 157 aaKnown RBP6.28□□□□□ -1.4
ATXN3-203ENST00000393287 RITA1Q96K30 269 aa6.28□□□□□ -1.4
ATXN3-203ENST00000393287 IGHV1-24A0A0C4DH33 117 aa6.28□□□□□ -1.4
ATXN3-203ENST00000393287 NIT1Q86X76 327 aa6.28□□□□□ -1.4
ATXN3-203ENST00000393287 SLC25A20O43772 301 aa6.28□□□□□ -1.4
ATXN3-203ENST00000393287 TMEM95Q3KNT9 176 aa6.28□□□□□ -1.4
ATXN3-203ENST00000393287 C14orf178Q8N769 122 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-203ENST00000393287 C16orf95Q9H693 158 aa6.28□□□□□ -1.4
ATXN3-203ENST00000393287 FREM1Q5H8C1 2179 aa6.28□□□□□ -1.4
ATXN3-203ENST00000393287 P0C879 139 aa6.27□□□□□ -1.41
ATXN3-203ENST00000393287 IGFL4Q6B9Z1 124 aa6.27□□□□□ -1.41
ATXN3-203ENST00000393287 TNRC6BQ9UPQ9 1833 aaKnown RBP6.27□□□□□ -1.41
ATXN3-203ENST00000393287 PAX4O43316 350 aa6.27□□□□□ -1.41
ATXN3-203ENST00000393287 EIF4EBP1Q13541 118 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms