RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 ZNF324O75467 553 aaPredicted RBP15.23■□□□□ 0.03
PTPN11-202ENST00000392597 LYZL1Q6UWQ5 148 aa15.23■□□□□ 0.03
PTPN11-202ENST00000392597 ZNF493Q6ZR52 646 aa15.23■□□□□ 0.03
PTPN11-202ENST00000392597 UBE2E2Q96LR5 201 aa15.23■□□□□ 0.03
PTPN11-202ENST00000392597 LINC00477Q96M19 166 aa15.23■□□□□ 0.03
PTPN11-202ENST00000392597 TMSB15BA0A087X1C1 80 aa15.23■□□□□ 0.03
PTPN11-202ENST00000392597 IGLC6P0CF74 106 aa15.23■□□□□ 0.03
PTPN11-202ENST00000392597 TPPP3Q9BW30 176 aa15.23■□□□□ 0.03
PTPN11-202ENST00000392597 ORM1P02763 201 aa15.22■□□□□ 0.03
PTPN11-202ENST00000392597 DMRTA1Q5VZB9 504 aa15.22■□□□□ 0.03
PTPN11-202ENST00000392597 Q6ZWC4 215 aa15.22■□□□□ 0.03
PTPN11-202ENST00000392597 FER1L6-AS1Q8NA97 138 aa15.22■□□□□ 0.03
PTPN11-202ENST00000392597 AMTP48728 403 aa15.21■□□□□ 0.03
PTPN11-202ENST00000392597 REC114Q7Z4M0 266 aa15.21■□□□□ 0.03
PTPN11-202ENST00000392597 OR10J6PQ8NGY7 276 aa15.21■□□□□ 0.03
PTPN11-202ENST00000392597 LGALS9O00182 355 aa15.2■□□□□ 0.02
PTPN11-202ENST00000392597 RPL11P62913 178 aaKnown RBP15.2■□□□□ 0.02
PTPN11-202ENST00000392597 ZNF575Q86XF7 245 aa15.2■□□□□ 0.02
PTPN11-202ENST00000392597 SONP18583 2426 aaKnown RBP15.2■□□□□ 0.02
PTPN11-202ENST00000392597 SMR3AQ99954 134 aa15.2■□□□□ 0.02
PTPN11-202ENST00000392597 CNFNQ9BYD5 112 aa15.2■□□□□ 0.02
PTPN11-202ENST00000392597 HIVEP2P31629 2446 aa15.19■□□□□ 0.02
PTPN11-202ENST00000392597 TMEM213A2RRL7 107 aa15.18■□□□□ 0.02
PTPN11-202ENST00000392597 SCGB1D1O95968 90 aa15.18■□□□□ 0.02
PTPN11-202ENST00000392597 NAGKQ9UJ70 344 aa15.18■□□□□ 0.02
PTPN11-202ENST00000392597 ANK3Q12955 4377 aaKnown RBP15.18■□□□□ 0.02
PTPN11-202ENST00000392597 TRBV7-9A0A0J9YWB2 115 aa15.18■□□□□ 0.02
PTPN11-202ENST00000392597 LY6G6DO95868 133 aa15.18■□□□□ 0.02
PTPN11-202ENST00000392597 TMEM160Q9NX00 188 aa15.18■□□□□ 0.02
PTPN11-202ENST00000392597 HSBP1O75506 76 aa15.17■□□□□ 0.02
PTPN11-202ENST00000392597 PMCHP20382 165 aa15.17■□□□□ 0.02
PTPN11-202ENST00000392597 ID1P41134 155 aa15.17■□□□□ 0.02
PTPN11-202ENST00000392597 PKIAP61925 76 aa15.17■□□□□ 0.02
PTPN11-202ENST00000392597 CHCHD1Q96BP2 118 aaKnown RBP15.17■□□□□ 0.02
PTPN11-202ENST00000392597 YAE1D1Q9NRH1 226 aa15.16■□□□□ 0.02
PTPN11-202ENST00000392597 PRR31Q5SQ13 230 aa15.16■□□□□ 0.02
PTPN11-202ENST00000392597 FAM104BQ5XKR9 115 aa15.16■□□□□ 0.02
PTPN11-202ENST00000392597 RNASEKQ6P5S7 137 aaKnown RBP15.16■□□□□ 0.02
PTPN11-202ENST00000392597 NIT1Q86X76 327 aa15.16■□□□□ 0.02
PTPN11-202ENST00000392597 OR8A1Q8NGG7 326 aa15.16■□□□□ 0.02
PTPN11-202ENST00000392597 DCANP1Q8TF63 244 aa15.16■□□□□ 0.02
PTPN11-202ENST00000392597 IGHV4OR15-8A0A075B7B6 117 aa15.15■□□□□ 0.02
PTPN11-202ENST00000392597 A0A087WW49 117 aa15.15■□□□□ 0.02
PTPN11-202ENST00000392597 IGKV3D-20A0A0C4DH25 116 aa15.15■□□□□ 0.02
PTPN11-202ENST00000392597 FAM181BA6NEQ2 426 aa15.15■□□□□ 0.02
PTPN11-202ENST00000392597 LINC00587B1AMM8 73 aa15.15■□□□□ 0.02
PTPN11-202ENST00000392597 TSTD3H0UI37 97 aa15.15■□□□□ 0.02
PTPN11-202ENST00000392597 DUX5Q96PT3 197 aa15.15■□□□□ 0.02
PTPN11-202ENST00000392597 C11orf21Q9P2W6 132 aa15.15■□□□□ 0.02
PTPN11-202ENST00000392597 KLHDC1Q8N7A1 406 aa15.14■□□□□ 0.01
PTPN11-202ENST00000392597 URB1-AS1Q96HZ7 61 aa15.14■□□□□ 0.01
PTPN11-202ENST00000392597 FAM19A4Q96LR4 140 aa15.14■□□□□ 0.01
PTPN11-202ENST00000392597 ZNF705DP0CH99 300 aaPredicted RBP15.14■□□□□ 0.01
PTPN11-202ENST00000392597 ZNF705BP0CI00 300 aaPredicted RBP15.14■□□□□ 0.01
PTPN11-202ENST00000392597 EDN2P20800 178 aa15.14■□□□□ 0.01
PTPN11-202ENST00000392597 HOXD3P31249 432 aaPredicted RBP15.14■□□□□ 0.01
PTPN11-202ENST00000392597 ZFAND2AQ8N6M9 145 aa15.14■□□□□ 0.01
PTPN11-202ENST00000392597 U3KQK5 164 aa15.14■□□□□ 0.01
PTPN11-202ENST00000392597 NTF3P20783 257 aa15.13■□□□□ 0.01
PTPN11-202ENST00000392597 SYNJ2BPP57105 145 aa15.13■□□□□ 0.01
PTPN11-202ENST00000392597 TWIST1Q15672 202 aa15.13■□□□□ 0.01
PTPN11-202ENST00000392597 APRG1Q8IVJ8 170 aa15.13■□□□□ 0.01
PTPN11-202ENST00000392597 FAM19A2Q8N3H0 131 aa15.13■□□□□ 0.01
PTPN11-202ENST00000392597 MTORP42345 2549 aa15.13■□□□□ 0.01
PTPN11-202ENST00000392597 IGKV3-7A0A075B6H7 116 aa15.12■□□□□ 0.01
PTPN11-202ENST00000392597 TMEM191AQ9H0A3 160 aa15.12■□□□□ 0.01
PTPN11-202ENST00000392597 NSD1Q96L73 2696 aaPredicted RBP15.12■□□□□ 0.01
PTPN11-202ENST00000392597 M0R2Z0 102 aa15.12■□□□□ 0.01
PTPN11-202ENST00000392597 CD33P20138 364 aa15.12■□□□□ 0.01
PTPN11-202ENST00000392597 TRAV21A0A0B4J279 112 aa15.11■□□□□ 0.01
PTPN11-202ENST00000392597 DNAJC9-AS1A6NH13 148 aa15.11■□□□□ 0.01
PTPN11-202ENST00000392597 LINC00614P0C842 121 aa15.11■□□□□ 0.01
PTPN11-202ENST00000392597 PRR9Q5T870 116 aa15.11■□□□□ 0.01
PTPN11-202ENST00000392597 ZNF664Q8N3J9 261 aa15.11■□□□□ 0.01
PTPN11-202ENST00000392597 MS4A6AQ9H2W1 248 aa15.11■□□□□ 0.01
PTPN11-202ENST00000392597 RAB4AP20338 218 aa15.1■□□□□ 0.01
PTPN11-202ENST00000392597 KRTDAPP60985 99 aa15.1■□□□□ 0.01
PTPN11-202ENST00000392597 TEX43Q6ZNM6 134 aa15.1■□□□□ 0.01
PTPN11-202ENST00000392597 RNF114Q9Y508 228 aa15.1■□□□□ 0.01
PTPN11-202ENST00000392597 C2orf70A6NJV1 201 aa15.1■□□□□ 0.01
PTPN11-202ENST00000392597 OR5AL1P0C617 328 aa15.1■□□□□ 0.01
PTPN11-202ENST00000392597 SRD5A1P18405 259 aa15.1■□□□□ 0.01
PTPN11-202ENST00000392597 AMN1Q8IY45 258 aa15.1■□□□□ 0.01
PTPN11-202ENST00000392597 ORMDL3Q8N138 153 aa15.1■□□□□ 0.01
PTPN11-202ENST00000392597 C4orf3Q8WVX3 66 aa15.1■□□□□ 0.01
PTPN11-202ENST00000392597 MUC21A0A0G2JKD1 596 aa15.09■□□□□ 0.01
PTPN11-202ENST00000392597 MUC21A0A140T8X8 626 aa15.09■□□□□ 0.01
PTPN11-202ENST00000392597 MRPL51Q4U2R6 128 aaKnown RBP15.09■□□□□ 0.01
PTPN11-202ENST00000392597 MUC21Q5SSG8 566 aa15.09■□□□□ 0.01
PTPN11-202ENST00000392597 M0QZ24 198 aa15.08■□□□□ 0.01
PTPN11-202ENST00000392597 SNAI2O43623 268 aa15.08■□□□□ 0.01
PTPN11-202ENST00000392597 SNRPD3P62318 126 aaKnown RBP15.08■□□□□ 0.01
PTPN11-202ENST00000392597 Q6ZSV7 163 aa15.08■□□□□ 0.01
PTPN11-202ENST00000392597 WFDC12Q8WWY7 111 aa15.08■□□□□ 0.01
PTPN11-202ENST00000392597 D6R8Y8 96 aa15.08■□□□□ 0
PTPN11-202ENST00000392597 F6UB75 175 aa15.08■□□□□ 0
PTPN11-202ENST00000392597 K7EQG2 157 aa15.08■□□□□ 0
PTPN11-202ENST00000392597 C3orf79P0CE67 100 aa15.08■□□□□ 0
PTPN11-202ENST00000392597 DEFB1P60022 68 aa15.08■□□□□ 0
PTPN11-202ENST00000392597 SSTP61278 116 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms