RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 TTC32Q5I0X7 151 aa11.4□□□□□ -0.58
PTPRK-208ENST00000392449 C18orf15Q96N68 181 aa11.4□□□□□ -0.58
PTPRK-208ENST00000392449 ATP5SQ99766 215 aa11.4□□□□□ -0.58
PTPRK-208ENST00000392449 APOBP04114 4563 aaKnown RBP11.4□□□□□ -0.58
PTPRK-208ENST00000392449 KRTAP10-2P60368 255 aa11.39□□□□□ -0.59
PTPRK-208ENST00000392449 UBE2L3P68036 154 aaKnown RBP11.39□□□□□ -0.59
PTPRK-208ENST00000392449 FFAR4Q5NUL3 377 aa11.39□□□□□ -0.59
PTPRK-208ENST00000392449 IBA57Q5T440 356 aaKnown RBP11.39□□□□□ -0.59
PTPRK-208ENST00000392449 ST6GAL2Q96JF0 529 aa11.39□□□□□ -0.59
PTPRK-208ENST00000392449 ARPC5LQ9BPX5 153 aa11.39□□□□□ -0.59
PTPRK-208ENST00000392449 KCNIP2Q9NS61 270 aa11.39□□□□□ -0.59
PTPRK-208ENST00000392449 PAX4O43316 350 aa11.38□□□□□ -0.59
PTPRK-208ENST00000392449 PRAF2O60831 178 aa11.38□□□□□ -0.59
PTPRK-208ENST00000392449 NMBP08949 121 aa11.38□□□□□ -0.59
PTPRK-208ENST00000392449 MDFICQ9P1T7 246 aa11.38□□□□□ -0.59
PTPRK-208ENST00000392449 HSPB11Q9Y547 144 aa11.38□□□□□ -0.59
PTPRK-208ENST00000392449 C17orf112F2Z3M2 114 aa11.38□□□□□ -0.59
PTPRK-208ENST00000392449 MPC2O95563 127 aa11.38□□□□□ -0.59
PTPRK-208ENST00000392449 LINC00315P59091 139 aa11.38□□□□□ -0.59
PTPRK-208ENST00000392449 CYCSP99999 105 aaKnown RBP11.38□□□□□ -0.59
PTPRK-208ENST00000392449 C8orf49Q96NF6 230 aa11.38□□□□□ -0.59
PTPRK-208ENST00000392449 MARVELD1Q9BSK0 173 aa11.38□□□□□ -0.59
PTPRK-208ENST00000392449 DNAH5Q8TE73 4624 aa11.37□□□□□ -0.59
PTPRK-208ENST00000392449 SSNA1O43805 119 aa11.37□□□□□ -0.59
PTPRK-208ENST00000392449 CDK2AP2O75956 126 aa11.37□□□□□ -0.59
PTPRK-208ENST00000392449 HYLS1Q96M11 299 aa11.37□□□□□ -0.59
PTPRK-208ENST00000392449 WFDC1Q9HC57 220 aa11.37□□□□□ -0.59
PTPRK-208ENST00000392449 MBD2Q9UBB5 411 aa11.37□□□□□ -0.59
PTPRK-208ENST00000392449 RPH3ALQ9UNE2 315 aa11.37□□□□□ -0.59
PTPRK-208ENST00000392449 A0A1W2PPQ1 181 aa11.36□□□□□ -0.59
PTPRK-208ENST00000392449 A6NHS1 94 aa11.36□□□□□ -0.59
PTPRK-208ENST00000392449 DIRC3C9JPN6 131 aa11.36□□□□□ -0.59
PTPRK-208ENST00000392449 NXPH4O95158 308 aa11.36□□□□□ -0.59
PTPRK-208ENST00000392449 SFTA3P0C7M3 94 aa11.36□□□□□ -0.59
PTPRK-208ENST00000392449 FUSP35637 526 aaKnown RBP eCLIP11.36□□□□□ -0.593e-6■■■■□ 20.3
PTPRK-208ENST00000392449 CSN1S1P47710 185 aa11.36□□□□□ -0.59
PTPRK-208ENST00000392449 ZNF415Q09FC8 603 aa11.36□□□□□ -0.59
PTPRK-208ENST00000392449 FHL2Q14192 279 aa11.36□□□□□ -0.59
PTPRK-208ENST00000392449 MAPKAPK5-AS1Q8N8E1 139 aa11.36□□□□□ -0.59
PTPRK-208ENST00000392449 TNFRSF18Q9Y5U5 241 aa11.36□□□□□ -0.59
PTPRK-208ENST00000392449 ICOSQ9Y6W8 199 aa11.36□□□□□ -0.59
PTPRK-208ENST00000392449 RPL12P30050 165 aaKnown RBP11.35□□□□□ -0.59
PTPRK-208ENST00000392449 CRYBA4P53673 196 aa11.35□□□□□ -0.59
PTPRK-208ENST00000392449 ZNF266Q14584 549 aa11.35□□□□□ -0.59
PTPRK-208ENST00000392449 PTTG2Q9NZH5 202 aa11.35□□□□□ -0.59
PTPRK-208ENST00000392449 RBAKDNA6NC62 111 aa11.34□□□□□ -0.59
PTPRK-208ENST00000392449 SIVA1O15304 175 aa11.34□□□□□ -0.59
PTPRK-208ENST00000392449 TMEM183BQ1AE95 376 aa11.34□□□□□ -0.59
PTPRK-208ENST00000392449 KHDC3LQ587J8 217 aa11.34□□□□□ -0.59
PTPRK-208ENST00000392449 Q6ZRN7 208 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-208ENST00000392449 TMEM183AQ8IXX5 376 aa11.34□□□□□ -0.59
PTPRK-208ENST00000392449 SCGB1C1Q8TD33 95 aa11.34□□□□□ -0.59
PTPRK-208ENST00000392449 ZNF479Q96JC4 524 aa11.34□□□□□ -0.59
PTPRK-208ENST00000392449 PRO0255Q9UI72 69 aa11.34□□□□□ -0.59
PTPRK-208ENST00000392449 NAGKQ9UJ70 344 aa11.34□□□□□ -0.59
PTPRK-208ENST00000392449 HHLA3Q9XRX5 114 aa11.34□□□□□ -0.59
PTPRK-208ENST00000392449 TRBV7-9A0A0J9YWB2 115 aa11.33□□□□□ -0.6
PTPRK-208ENST00000392449 HMGB3O15347 200 aaKnown RBP11.33□□□□□ -0.6
PTPRK-208ENST00000392449 IFNA5P01569 189 aa11.33□□□□□ -0.6
PTPRK-208ENST00000392449 LYPD1Q8N2G4 141 aa11.33□□□□□ -0.6
PTPRK-208ENST00000392449 RAB2AP61019 212 aa11.32□□□□□ -0.6
PTPRK-208ENST00000392449 Q6AWC8 147 aa11.32□□□□□ -0.6
PTPRK-208ENST00000392449 LYPD5Q6UWN5 251 aa11.32□□□□□ -0.6
PTPRK-208ENST00000392449 TRAV8-1A0A0A6YYK1 113 aa11.32□□□□□ -0.6
PTPRK-208ENST00000392449 TRGV4A0A0C4DH28 118 aa11.32□□□□□ -0.6
PTPRK-208ENST00000392449 PGPA6NDG6 321 aa11.32□□□□□ -0.6
PTPRK-208ENST00000392449 F6UZH7 168 aa11.32□□□□□ -0.6
PTPRK-208ENST00000392449 PET100P0DJ07 73 aa11.32□□□□□ -0.6
PTPRK-208ENST00000392449 BTF3P20290 206 aaKnown RBP11.32□□□□□ -0.6
PTPRK-208ENST00000392449 TAS2R45P59539 299 aa11.32□□□□□ -0.6
PTPRK-208ENST00000392449 GNG5P63218 68 aa11.32□□□□□ -0.6
PTPRK-208ENST00000392449 GNRH2O43555 120 aa11.31□□□□□ -0.6
PTPRK-208ENST00000392449 FAM159AQ6UWV7 190 aa11.31□□□□□ -0.6
PTPRK-208ENST00000392449 GOLT1AQ6ZVE7 132 aa11.31□□□□□ -0.6
PTPRK-208ENST00000392449 TVP23CQ96ET8 276 aa11.31□□□□□ -0.6
PTPRK-208ENST00000392449 OTORQ9NRC9 128 aa11.31□□□□□ -0.6
PTPRK-208ENST00000392449 K7EQD1 137 aa11.3□□□□□ -0.6
PTPRK-208ENST00000392449 DEFA1P59665 94 aa11.3□□□□□ -0.6
PTPRK-208ENST00000392449 DEFA3P59666 94 aa11.3□□□□□ -0.6
PTPRK-208ENST00000392449 MRPL23Q16540 153 aaKnown RBP11.3□□□□□ -0.6
PTPRK-208ENST00000392449 SGK494Q96LW2 274 aa11.3□□□□□ -0.6
PTPRK-208ENST00000392449 GYPEP15421 78 aa11.29□□□□□ -0.6
PTPRK-208ENST00000392449 NEGR1Q7Z3B1 354 aa11.29□□□□□ -0.6
PTPRK-208ENST00000392449 WFDC10BQ8IUB3 73 aa11.29□□□□□ -0.6
PTPRK-208ENST00000392449 OR10G4Q8NGN3 311 aa11.29□□□□□ -0.6
PTPRK-208ENST00000392449 CMTM2Q8TAZ6 248 aa11.29□□□□□ -0.6
PTPRK-208ENST00000392449 RASL10AQ92737 203 aa11.29□□□□□ -0.6
PTPRK-208ENST00000392449 LENEPQ9Y5L5 61 aa11.29□□□□□ -0.6
PTPRK-208ENST00000392449 TRGV11A0A075B6L2 103 aa11.28□□□□□ -0.6
PTPRK-208ENST00000392449 LOC100131303A0A0U1RQF7 123 aa11.28□□□□□ -0.6
PTPRK-208ENST00000392449 SLAQ13239 276 aa11.28□□□□□ -0.6
PTPRK-208ENST00000392449 ACOT6Q3I5F7 207 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-208ENST00000392449 C4orf48Q5BLP8 95 aa11.28□□□□□ -0.6
PTPRK-208ENST00000392449 IGHV3-16A0A0C4DH30 117 aa11.27□□□□□ -0.6
PTPRK-208ENST00000392449 A0A1W2PPV4 95 aa11.27□□□□□ -0.6
PTPRK-208ENST00000392449 DNAH10OSP0CZ25 163 aa11.27□□□□□ -0.6
PTPRK-208ENST00000392449 SRIP30626 198 aa11.27□□□□□ -0.6
PTPRK-208ENST00000392449 OR10G9Q8NGN4 311 aa11.27□□□□□ -0.6
PTPRK-208ENST00000392449 OR10G7Q8NGN6 311 aa11.27□□□□□ -0.6
PTPRK-208ENST00000392449 TMED6Q8WW62 240 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms